RNA–Protein interactions for RNA: snR45

snR45, Transcript of C/D box small nucleolar RNA (snoRNA) but not shown to be active, yeast

Gene snR45, Length 172 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR45	snR45	USV1	Q12132	391 aa		0.8	□□□□□ -2.28
snR45	snR45	LYP1	P32487	611 aa		0.79	□□□□□ -2.28
snR45	snR45	SET3	P36124	751 aa		0.79	□□□□□ -2.28
snR45	snR45	FMO1	P38866	432 aa		0.79	□□□□□ -2.28
snR45	snR45	PFA3	P42836	336 aa		0.79	□□□□□ -2.28
snR45	snR45	YGR122W	P53272	402 aa		0.79	□□□□□ -2.28
snR45	snR45	TEX1	P53851	422 aa	Known RBP	0.79	□□□□□ -2.28
snR45	snR45	HDA1	P53973	706 aa		0.79	□□□□□ -2.28
snR45	snR45	GAD1	Q04792	585 aa		0.79	□□□□□ -2.28
snR45	snR45	YMR317W	Q04893	1140 aa		0.79	□□□□□ -2.28
snR45	snR45	RSA1	Q08932	381 aa		0.79	□□□□□ -2.28
snR45	snR45	CRC1	Q12289	327 aa		0.79	□□□□□ -2.28
snR45	snR45	TPK2	P06245	380 aa		0.78	□□□□□ -2.28
snR45	snR45	MOT2	P34909	587 aa	Known RBP	0.78	□□□□□ -2.28
snR45	snR45	RRT2	P38332	387 aa		0.78	□□□□□ -2.28
snR45	snR45	YMR124W	P39523	943 aa	Known RBP	0.78	□□□□□ -2.28
snR45	snR45	SNF7	P39929	240 aa	Known RBP	0.78	□□□□□ -2.28
snR45	snR45	ARG7	Q04728	441 aa		0.78	□□□□□ -2.28
snR45	snR45	BMS1	Q08965	1183 aa	Known RBP	0.78	□□□□□ -2.28
snR45	snR45	YPR117W	Q06116	2489 aa		0.78	□□□□□ -2.28
snR45	snR45	TRP2	P00899	507 aa	Known RBP	0.77	□□□□□ -2.29
snR45	snR45	YAP1	P19880	650 aa	Known RBP	0.77	□□□□□ -2.29
snR45	snR45	RFA1	P22336	621 aa	Known RBP	0.77	□□□□□ -2.29
snR45	snR45	SAN1	P22470	610 aa		0.77	□□□□□ -2.29
snR45	snR45	MET4	P32389	672 aa		0.77	□□□□□ -2.29
snR45	snR45	YEL1	P34225	687 aa		0.77	□□□□□ -2.29
snR45	snR45	YBR259W	P38338	688 aa		0.77	□□□□□ -2.29
snR45	snR45	SAK1	P38990	1142 aa		0.77	□□□□□ -2.29
snR45	snR45	CEP3	P40969	608 aa		0.77	□□□□□ -2.29
snR45	snR45	YBL113C	Q7M4S9	792 aa		0.77	□□□□□ -2.29
snR45	snR45	RAD2	P07276	1031 aa		0.76	□□□□□ -2.29
snR45	snR45	AAD3	P25612	363 aa		0.76	□□□□□ -2.29
snR45	snR45	RPT1	P33299	467 aa	Known RBP	0.76	□□□□□ -2.29
snR45	snR45	NUP60	P39705	539 aa		0.76	□□□□□ -2.29
snR45	snR45	IDP3	P53982	420 aa	Known RBP	0.76	□□□□□ -2.29
snR45	snR45	RTT10	Q08924	1013 aa		0.76	□□□□□ -2.29
snR45	snR45	TMA46	Q12000	345 aa	Known RBP	0.76	□□□□□ -2.29
snR45	snR45	CLF1	Q12309	687 aa	Predicted RBP	0.76	□□□□□ -2.29
snR45	snR45	URA1	P28272	314 aa	Predicted RBP	0.75	□□□□□ -2.29
snR45	snR45	MRPL4	P36517	319 aa		0.75	□□□□□ -2.29
snR45	snR45	ECM1	P39715	212 aa		0.75	□□□□□ -2.29
snR45	snR45	SIM1	P40472	476 aa		0.75	□□□□□ -2.29
snR45	snR45	IRR1	P40541	1150 aa		0.75	□□□□□ -2.29
snR45	snR45	LYS20	P48570	428 aa	Known RBP	0.75	□□□□□ -2.29
snR45	snR45	RPL34A	P87262	121 aa	Predicted RBP	0.75	□□□□□ -2.29
snR45	snR45	MDM20	Q12387	796 aa	Known RBP	0.75	□□□□□ -2.29
snR45	snR45	TOR1	P35169	2470 aa		0.75	□□□□□ -2.29
snR45	snR45	TAO3	P40468	2376 aa		0.75	□□□□□ -2.29
snR45	snR45	YER190C-B	P0CX94	160 aa		0.74	□□□□□ -2.29
snR45	snR45	YEL077W-A	P0CX95	160 aa		0.74	□□□□□ -2.29
snR45	snR45	YGR296C-B	P0CX96	160 aa		0.74	□□□□□ -2.29
snR45	snR45	YPL283W-B	P0CX97	160 aa		0.74	□□□□□ -2.29
snR45	snR45	YPR204C-A	P0CX98	160 aa		0.74	□□□□□ -2.29
snR45	snR45	MRPL9	P31334	269 aa		0.74	□□□□□ -2.29
snR45	snR45	PET112	P33893	541 aa		0.74	□□□□□ -2.29
snR45	snR45	MTL1	P53214	551 aa		0.74	□□□□□ -2.29
snR45	snR45	CTK1	Q03957	528 aa	Known RBP	0.74	□□□□□ -2.29
snR45	snR45	RPS9A	O13516	197 aa	Known RBP	0.73	□□□□□ -2.29
snR45	snR45	YEL076C-A	P0CX16	216 aa		0.73	□□□□□ -2.29
snR45	snR45	YLR464W	P0CX17	216 aa		0.73	□□□□□ -2.29
snR45	snR45	YCP4	P25349	247 aa	Known RBP	0.73	□□□□□ -2.29
snR45	snR45	YEL076C	P39971	216 aa		0.73	□□□□□ -2.29
snR45	snR45	SSY5	P47002	699 aa		0.73	□□□□□ -2.29
snR45	snR45	YGR151C	P53287	111 aa		0.73	□□□□□ -2.29
snR45	snR45	DUS3	Q06053	668 aa	Known RBP	0.73	□□□□□ -2.29
snR45	snR45	VPS36	Q06696	566 aa		0.73	□□□□□ -2.29
snR45	snR45	ZRT2	Q12436	422 aa		0.73	□□□□□ -2.29
snR45	snR45	CYC8	P14922	966 aa		0.72	□□□□□ -2.29
snR45	snR45	NPP1	P25353	742 aa		0.72	□□□□□ -2.29
snR45	snR45	KSP1	P38691	1029 aa	Known RBP	0.72	□□□□□ -2.29
snR45	snR45	LYS9	P38999	446 aa		0.72	□□□□□ -2.29
snR45	snR45	ATG36	P46983	293 aa		0.72	□□□□□ -2.29
snR45	snR45	HAL9	Q12180	1030 aa		0.72	□□□□□ -2.29
snR45	snR45	SEN1	Q00416	2231 aa	Known RBP	0.72	□□□□□ -2.29
snR45	snR45	PRP8	P33334	2413 aa	Known RBP	0.72	□□□□□ -2.29
snR45	snR45	YPT1	P01123	206 aa	Known RBP	0.71	□□□□□ -2.3
snR45	snR45	ABF1	P14164	731 aa		0.71	□□□□□ -2.3
snR45	snR45	URE2	P23202	354 aa	Known RBP	0.71	□□□□□ -2.3
snR45	snR45	APD1	P38281	316 aa		0.71	□□□□□ -2.3
snR45	snR45	MTG2	P38860	518 aa		0.71	□□□□□ -2.3
snR45	snR45	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	0.71	□□□□□ -2.3	not detected
snR45	snR45	TYW3	P53177	273 aa		0.71	□□□□□ -2.3
snR45	snR45	IMP4	P53941	290 aa	Known RBP	0.71	□□□□□ -2.3
snR45	snR45	GPR1	Q12361	961 aa		0.71	□□□□□ -2.3
snR45	snR45	FAB1	P34756	2278 aa		0.7	□□□□□ -2.3
snR45	snR45	YHL050C	P38721	697 aa		0.7	□□□□□ -2.3
snR45	snR45	YHR219W	P38900	624 aa		0.7	□□□□□ -2.3
snR45	snR45	YIL024C	P40543	189 aa		0.7	□□□□□ -2.3
snR45	snR45	PMT6	P42934	759 aa		0.7	□□□□□ -2.3
snR45	snR45	LAM4	P38800	1345 aa		0.69	□□□□□ -2.3
snR45	snR45	YCR043C	P25361	127 aa		0.69	□□□□□ -2.3
snR45	snR45	YEL068C	P39977	110 aa		0.69	□□□□□ -2.3
snR45	snR45	MKT1	P40850	830 aa	Known RBP	0.69	□□□□□ -2.3
snR45	snR45	TES1	P41903	349 aa	Known RBP	0.69	□□□□□ -2.3
snR45	snR45	ROK1	P45818	564 aa	Predicted RBP	0.69	□□□□□ -2.3
snR45	snR45	HOS2	P53096	452 aa	Predicted RBP	0.69	□□□□□ -2.3
snR45	snR45	YGL117W	P53133	265 aa		0.69	□□□□□ -2.3
snR45	snR45	BOP3	P53958	396 aa		0.69	□□□□□ -2.3
snR45	snR45	UTP20	P35194	2493 aa	Known RBP	0.69	□□□□□ -2.3
snR45	snR45	LEU2	P04173	364 aa	Predicted RBP	0.68	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms