RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C PEX2P32800 271 aa2.27□□□□□ -2.05
NIP100YPL174C YJL163CP46996 555 aa2.27□□□□□ -2.05
NIP100YPL174C SLU7Q02775 382 aaKnown RBP2.27□□□□□ -2.05
NIP100YPL174C IRC10Q08118 586 aa2.27□□□□□ -2.05
NIP100YPL174C YBR182C-AQ8TGU6 64 aa2.27□□□□□ -2.05
NIP100YPL174C MET6P05694 767 aaKnown RBP2.26□□□□□ -2.05
NIP100YPL174C SPO11P23179 398 aa2.26□□□□□ -2.05
NIP100YPL174C SLI1P53304 468 aa2.26□□□□□ -2.05
NIP100YPL174C ASM4Q05166 528 aa2.26□□□□□ -2.05
NIP100YPL174C PRP4P20053 465 aaKnown RBP2.26□□□□□ -2.05
NIP100YPL174C PEX6P33760 1030 aa2.26□□□□□ -2.05
NIP100YPL174C MTH1P35198 433 aa2.26□□□□□ -2.05
NIP100YPL174C TRZ1P36159 838 aaPredicted RBP2.26□□□□□ -2.05
NIP100YPL174C HSL7P38274 827 aa2.26□□□□□ -2.05
NIP100YPL174C NHX1Q04121 633 aa2.26□□□□□ -2.05
NIP100YPL174C THI21Q08975 551 aa2.26□□□□□ -2.05
NIP100YPL174C MRH1Q12117 320 aaPredicted RBP2.26□□□□□ -2.05
NIP100YPL174C CCR4P31384 837 aaKnown RBP2.25□□□□□ -2.05
NIP100YPL174C TDP1P38319 544 aa2.25□□□□□ -2.05
NIP100YPL174C SIC1P38634 284 aa2.25□□□□□ -2.05
NIP100YPL174C SNP1Q00916 300 aaPredicted RBP2.25□□□□□ -2.05
NIP100YPL174C DIA2Q08496 732 aaPredicted RBP2.25□□□□□ -2.05
NIP100YPL174C ATG11Q12527 1178 aa2.25□□□□□ -2.05
NIP100YPL174C Q0142Q9ZZW4 58 aa2.25□□□□□ -2.05
NIP100YPL174C CDC9P04819 755 aa2.25□□□□□ -2.05
NIP100YPL174C SFB3P38810 929 aa2.25□□□□□ -2.05
NIP100YPL174C CCT3P39077 534 aaKnown RBP2.25□□□□□ -2.05
NIP100YPL174C BUL1P48524 976 aa2.25□□□□□ -2.05
NIP100YPL174C UBC9P50623 157 aaPredicted RBP2.25□□□□□ -2.05
NIP100YPL174C MRPS35P53292 345 aa2.25□□□□□ -2.05
NIP100YPL174C YAP1802P53309 568 aa2.25□□□□□ -2.05
NIP100YPL174C BCD1P38772 366 aa2.24□□□□□ -2.05
NIP100YPL174C ARG2P40360 574 aa2.24□□□□□ -2.05
NIP100YPL174C TEL2P53038 688 aa2.24□□□□□ -2.05
NIP100YPL174C YML122CQ03207 126 aa2.24□□□□□ -2.05
NIP100YPL174C APN2P38207 520 aa2.24□□□□□ -2.05
NIP100YPL174C YBR053CP38235 358 aa2.24□□□□□ -2.05
NIP100YPL174C FMP52P40008 231 aa2.24□□□□□ -2.05
NIP100YPL174C SDS3P40505 327 aa2.24□□□□□ -2.05
NIP100YPL174C GPD1Q00055 391 aaKnown RBP2.24□□□□□ -2.05
NIP100YPL174C YDR338CQ05497 695 aa2.24□□□□□ -2.05
NIP100YPL174C YJL206CP39529 758 aa2.23□□□□□ -2.05
NIP100YPL174C ATF1P40353 525 aa2.23□□□□□ -2.05
NIP100YPL174C NDC80P40460 691 aa2.23□□□□□ -2.05
NIP100YPL174C TEX1P53851 422 aaKnown RBP2.23□□□□□ -2.05
NIP100YPL174C ERG5P54781 538 aa2.23□□□□□ -2.05
NIP100YPL174C RPN4Q03465 531 aa2.23□□□□□ -2.05
NIP100YPL174C GIS1Q03833 894 aa2.23□□□□□ -2.05
NIP100YPL174C CLF1Q12309 687 aaPredicted RBP2.23□□□□□ -2.05
NIP100YPL174C YLR149CQ99296 730 aa2.23□□□□□ -2.05
NIP100YPL174C RPS9BP05755 195 aaKnown RBP2.23□□□□□ -2.05
NIP100YPL174C HOG1P32485 435 aa2.23□□□□□ -2.05
NIP100YPL174C YKL033W-AQ86ZR7 236 aa2.23□□□□□ -2.05
NIP100YPL174C ABF1P14164 731 aa2.22□□□□□ -2.05
NIP100YPL174C MTC2P34246 357 aa2.22□□□□□ -2.05
NIP100YPL174C APL2P36000 726 aaPredicted RBP2.22□□□□□ -2.05
NIP100YPL174C MCD4P36051 919 aa2.22□□□□□ -2.05
NIP100YPL174C YKR051WP36142 418 aa2.22□□□□□ -2.05
NIP100YPL174C PIG2P40187 538 aa2.22□□□□□ -2.05
NIP100YPL174C BNA2P47125 453 aa2.22□□□□□ -2.05
NIP100YPL174C MTL1P53214 551 aa2.22□□□□□ -2.05
NIP100YPL174C REC102Q02721 264 aa2.22□□□□□ -2.05
NIP100YPL174C FPR4Q06205 392 aaPredicted RBP2.22□□□□□ -2.05
NIP100YPL174C ZRT2Q12436 422 aa2.22□□□□□ -2.05
NIP100YPL174C PYC1P11154 1178 aaKnown RBP2.22□□□□□ -2.05
NIP100YPL174C CUE2P36075 443 aaKnown RBP2.22□□□□□ -2.05
NIP100YPL174C GLG1P36143 616 aa2.22□□□□□ -2.05
NIP100YPL174C CTR1P49573 406 aa2.22□□□□□ -2.05
NIP100YPL174C AIM14P53109 570 aa2.22□□□□□ -2.05
NIP100YPL174C PCL10P53124 433 aa2.22□□□□□ -2.05
NIP100YPL174C APM1Q00776 475 aaPredicted RBP2.22□□□□□ -2.05
NIP100YPL174C MCM21Q06675 368 aa2.22□□□□□ -2.05
NIP100YPL174C GUD1Q07729 489 aa2.22□□□□□ -2.05
NIP100YPL174C ECM3Q99252 613 aa2.22□□□□□ -2.05
NIP100YPL174C SRD1P09007 221 aa2.21□□□□□ -2.05
NIP100YPL174C ADE2P21264 571 aaKnown RBP2.21□□□□□ -2.05
NIP100YPL174C MSH2P25847 964 aa2.21□□□□□ -2.05
NIP100YPL174C OCA5P38738 679 aa2.21□□□□□ -2.05
NIP100YPL174C ECM1P39715 212 aa2.21□□□□□ -2.05
NIP100YPL174C YIL166CP40445 542 aa2.21□□□□□ -2.05
NIP100YPL174C CAF16P43569 289 aa2.21□□□□□ -2.05
NIP100YPL174C ATG36P46983 293 aa2.21□□□□□ -2.05
NIP100YPL174C UBC11P52492 156 aa2.21□□□□□ -2.05
NIP100YPL174C PAN2P53010 1115 aaPredicted RBP2.21□□□□□ -2.05
NIP100YPL174C UGO1Q03327 502 aa2.21□□□□□ -2.05
NIP100YPL174C ISA1Q07821 250 aaPredicted RBP2.21□□□□□ -2.05
NIP100YPL174C ERG20P08524 352 aaKnown RBP2.21□□□□□ -2.06
NIP100YPL174C KCC4P25389 1037 aa2.21□□□□□ -2.06
NIP100YPL174C QRI1P43123 477 aaKnown RBP2.21□□□□□ -2.06
NIP100YPL174C HLJ1P48353 224 aa2.21□□□□□ -2.06
NIP100YPL174C SDA1P53313 767 aaKnown RBP2.21□□□□□ -2.06
NIP100YPL174C SPC98P53540 846 aa2.21□□□□□ -2.06
NIP100YPL174C TFB2Q02939 513 aa2.21□□□□□ -2.06
NIP100YPL174C YTA7P40340 1379 aa2.21□□□□□ -2.06
NIP100YPL174C RPA135P22138 1203 aaKnown RBP2.21□□□□□ -2.06
NIP100YPL174C MEF1P25039 761 aa2.21□□□□□ -2.06
NIP100YPL174C YHR112CP38716 378 aa2.21□□□□□ -2.06
NIP100YPL174C FMO1P38866 432 aa2.21□□□□□ -2.06
NIP100YPL174C NUP60P39705 539 aa2.21□□□□□ -2.06
NIP100YPL174C NTG2Q08214 380 aa2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms