RNA–Protein interactions for RNA: YOR166C

SWT1, Transcript of RNA endoribonuclease involved in perinuclear mRNP quality control, yeastyeast

Gene SWT1, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWT1YOR166C YBR182C-AQ8TGU6 64 aa3.25□□□□□ -1.89
SWT1YOR166C VPS34P22543 875 aa3.24□□□□□ -1.89
SWT1YOR166C RPL8BP29453 256 aaKnown RBP3.24□□□□□ -1.89
SWT1YOR166C GLG1P36143 616 aa3.24□□□□□ -1.89
SWT1YOR166C HRB1P38922 454 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
SWT1YOR166C REV7P38927 245 aa3.24□□□□□ -1.89
SWT1YOR166C ARG2P40360 574 aa3.24□□□□□ -1.89
SWT1YOR166C BNA3P47039 444 aaKnown RBP3.24□□□□□ -1.89
SWT1YOR166C NIT3P49954 291 aa3.24□□□□□ -1.89
SWT1YOR166C PAN2P53010 1115 aaPredicted RBP3.24□□□□□ -1.89
SWT1YOR166C RGC1Q06108 1083 aaKnown RBP3.24□□□□□ -1.89
SWT1YOR166C HOM2P13663 365 aaKnown RBP3.23□□□□□ -1.89
SWT1YOR166C YUR1P26725 428 aa3.23□□□□□ -1.89
SWT1YOR166C SRP40P32583 406 aaPredicted RBP3.23□□□□□ -1.89
SWT1YOR166C FMO1P38866 432 aa3.23□□□□□ -1.89
SWT1YOR166C GAT1P43574 510 aa3.23□□□□□ -1.89
SWT1YOR166C UBP6P43593 499 aaKnown RBP3.23□□□□□ -1.89
SWT1YOR166C HXT16P47185 567 aa3.23□□□□□ -1.89
SWT1YOR166C MRK1P50873 501 aa3.23□□□□□ -1.89
SWT1YOR166C MTL1P53214 551 aa3.23□□□□□ -1.89
SWT1YOR166C SEG1Q04279 960 aa3.23□□□□□ -1.89
SWT1YOR166C PHR1P05066 565 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
SWT1YOR166C SFB3P38810 929 aa3.22□□□□□ -1.89
SWT1YOR166C SET5P38890 526 aaKnown RBP3.22□□□□□ -1.89
SWT1YOR166C HUL4P40985 892 aa3.22□□□□□ -1.89
SWT1YOR166C CTR1P49573 406 aa3.22□□□□□ -1.89
SWT1YOR166C ZIP2P53061 704 aa3.22□□□□□ -1.89
SWT1YOR166C ORC1P54784 914 aaPredicted RBP3.22□□□□□ -1.89
SWT1YOR166C NAN1Q02931 896 aaKnown RBP3.22□□□□□ -1.89
SWT1YOR166C GAD1Q04792 585 aa3.22□□□□□ -1.89
SWT1YOR166C MLH3Q12083 715 aa3.22□□□□□ -1.89
SWT1YOR166C MTR3P48240 250 aaPredicted RBP3.21□□□□□ -1.9
SWT1YOR166C ATG4P53867 494 aa3.21□□□□□ -1.9
SWT1YOR166C EAF1Q06337 982 aa3.21□□□□□ -1.9
SWT1YOR166C PHO11P35842 467 aa3.2□□□□□ -1.9
SWT1YOR166C PHO12P38693 467 aa3.2□□□□□ -1.9
SWT1YOR166C YHR112CP38716 378 aa3.2□□□□□ -1.9
SWT1YOR166C TY4A-JP47023 414 aa3.2□□□□□ -1.9
SWT1YOR166C ERP6P53198 216 aa3.2□□□□□ -1.9
SWT1YOR166C REH1Q06709 432 aa3.2□□□□□ -1.9
SWT1YOR166C CDC53Q12018 815 aaKnown RBP3.2□□□□□ -1.9
SWT1YOR166C GRX1P25373 110 aaKnown RBP3.19□□□□□ -1.9
SWT1YOR166C ARE1P25628 610 aa3.19□□□□□ -1.9
SWT1YOR166C SAP190P36123 1033 aa3.19□□□□□ -1.9
SWT1YOR166C LTP1P40347 161 aa3.19□□□□□ -1.9
SWT1YOR166C TIM54P47045 478 aa3.19□□□□□ -1.9
SWT1YOR166C UBC9P50623 157 aaPredicted RBP3.19□□□□□ -1.9
SWT1YOR166C HRP1Q99383 534 aaKnown RBP3.19□□□□□ -1.9
SWT1YOR166C THR1P17423 357 aaKnown RBP3.18□□□□□ -1.9
SWT1YOR166C HSP60P19882 572 aaKnown RBP3.18□□□□□ -1.9
SWT1YOR166C ADE2P21264 571 aaKnown RBP3.18□□□□□ -1.9
SWT1YOR166C MVD1P32377 396 aaKnown RBP3.18□□□□□ -1.9
SWT1YOR166C APL2P36000 726 aaPredicted RBP3.18□□□□□ -1.9
SWT1YOR166C MUP3P38734 546 aa3.18□□□□□ -1.9
SWT1YOR166C NUP60P39705 539 aa3.18□□□□□ -1.9
SWT1YOR166C SCS3P53012 380 aa3.18□□□□□ -1.9
SWT1YOR166C YGR125WP53273 1036 aa3.18□□□□□ -1.9
SWT1YOR166C ARG5,6Q01217 863 aa3.18□□□□□ -1.9
SWT1YOR166C ATP25Q03153 612 aa3.18□□□□□ -1.9
SWT1YOR166C YDL124WQ07551 312 aaKnown RBP3.18□□□□□ -1.9
SWT1YOR166C CIR2Q08822 631 aa3.18□□□□□ -1.9
SWT1YOR166C ERG6P25087 383 aaKnown RBP3.17□□□□□ -1.9
SWT1YOR166C YKL091CP33324 310 aaKnown RBP3.17□□□□□ -1.9
SWT1YOR166C RLP7P40693 322 aaKnown RBP3.17□□□□□ -1.9
SWT1YOR166C PRP31P49704 494 aaPredicted RBP3.17□□□□□ -1.9
SWT1YOR166C TAF8Q03750 510 aa3.17□□□□□ -1.9
SWT1YOR166C YDR338CQ05497 695 aa3.17□□□□□ -1.9
SWT1YOR166C MET7Q08645 548 aa3.17□□□□□ -1.9
SWT1YOR166C SSF2Q12153 453 aaPredicted RBP3.17□□□□□ -1.9
SWT1YOR166C STI1P15705 589 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
SWT1YOR166C SET3P36124 751 aa3.16□□□□□ -1.9
SWT1YOR166C BPL1P48445 690 aaPredicted RBP3.16□□□□□ -1.9
SWT1YOR166C CTK1Q03957 528 aaKnown RBP3.16□□□□□ -1.9
SWT1YOR166C RGT2Q12300 763 aa3.16□□□□□ -1.9
SWT1YOR166C PGK1P00560 416 aaKnown RBP3.15□□□□□ -1.9
SWT1YOR166C GAL11P19659 1081 aa3.15□□□□□ -1.9
SWT1YOR166C FUB1P25659 250 aa3.15□□□□□ -1.9
SWT1YOR166C HMO1Q03973 246 aaKnown RBP3.15□□□□□ -1.9
SWT1YOR166C YDR514CQ04408 483 aa3.15□□□□□ -1.9
SWT1YOR166C YOL098CQ12496 1037 aa3.15□□□□□ -1.9
SWT1YOR166C CIT1P00890 479 aa3.14□□□□□ -1.91
SWT1YOR166C RAD4P14736 754 aa3.14□□□□□ -1.91
SWT1YOR166C CCR4P31384 837 aaKnown RBP3.14□□□□□ -1.91
SWT1YOR166C SPC29P33419 253 aa3.14□□□□□ -1.91
SWT1YOR166C BET3P36149 193 aa3.14□□□□□ -1.91
SWT1YOR166C TRZ1P36159 838 aaPredicted RBP3.14□□□□□ -1.91
SWT1YOR166C GET2P40056 285 aa3.14□□□□□ -1.91
SWT1YOR166C ALG2P43636 503 aa3.14□□□□□ -1.91
SWT1YOR166C NET1P47035 1189 aa3.14□□□□□ -1.91
SWT1YOR166C ZDS1P50111 915 aaKnown RBP3.14□□□□□ -1.91
SWT1YOR166C FPR4Q06205 392 aaPredicted RBP3.14□□□□□ -1.91
SWT1YOR166C MCM21Q06675 368 aa3.14□□□□□ -1.91
SWT1YOR166C DIF1O13577 133 aa3.13□□□□□ -1.91
SWT1YOR166C ERG11P10614 530 aa3.13□□□□□ -1.91
SWT1YOR166C PTP1P25044 335 aa3.13□□□□□ -1.91
SWT1YOR166C PPG1P32838 368 aa3.13□□□□□ -1.91
SWT1YOR166C YMC2P38087 329 aa3.13□□□□□ -1.91
SWT1YOR166C MIT1P40002 666 aa3.13□□□□□ -1.91
SWT1YOR166C CHZ1P40019 153 aaPredicted RBP3.13□□□□□ -1.91
SWT1YOR166C SHR5P41912 237 aa3.13□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms