RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W DUS4Q06063 367 aa4.49□□□□□ -1.69
TRM112YNR046W NOP12Q08208 459 aaKnown RBP4.49□□□□□ -1.69
TRM112YNR046W DCS2Q12123 353 aa4.49□□□□□ -1.69
TRM112YNR046W APM4Q99186 491 aa4.49□□□□□ -1.69
TRM112YNR046W SST2P11972 698 aaKnown RBP4.48□□□□□ -1.69
TRM112YNR046W EMC1P25574 760 aa4.48□□□□□ -1.69
TRM112YNR046W DAL3P32459 195 aa4.48□□□□□ -1.69
TRM112YNR046W HIR1P32479 840 aa4.48□□□□□ -1.69
TRM112YNR046W SSZ1P38788 538 aaKnown RBP4.48□□□□□ -1.69
TRM112YNR046W VPS62P53285 467 aa4.48□□□□□ -1.69
TRM112YNR046W GCN5Q03330 439 aa4.48□□□□□ -1.69
TRM112YNR046W PKH1Q03407 766 aa4.48□□□□□ -1.69
TRM112YNR046W MUS81Q04149 632 aaPredicted RBP4.48□□□□□ -1.69
TRM112YNR046W ACK1Q07622 623 aaPredicted RBP4.48□□□□□ -1.69
TRM112YNR046W HMI1Q12039 706 aa4.48□□□□□ -1.69
TRM112YNR046W YPR027CQ12079 277 aa4.48□□□□□ -1.69
TRM112YNR046W MPD2Q99316 277 aa4.48□□□□□ -1.69
TRM112YNR046W COX11P19516 300 aaKnown RBP4.47□□□□□ -1.69
TRM112YNR046W OAF3P36023 863 aa4.47□□□□□ -1.69
TRM112YNR046W TRZ1P36159 838 aaPredicted RBP4.47□□□□□ -1.69
TRM112YNR046W VHR1P40522 640 aa4.47□□□□□ -1.69
TRM112YNR046W PFA3P42836 336 aa4.47□□□□□ -1.69
TRM112YNR046W RNR4P49723 345 aaKnown RBP4.47□□□□□ -1.69
TRM112YNR046W NCS6P53088 359 aa4.47□□□□□ -1.69
TRM112YNR046W ASI2P53895 289 aa4.47□□□□□ -1.69
TRM112YNR046W TGL2P54857 326 aa4.47□□□□□ -1.69
TRM112YNR046W PHM6Q05637 104 aa4.47□□□□□ -1.69
TRM112YNR046W RPS21BQ3E754 87 aaKnown RBP4.47□□□□□ -1.69
TRM112YNR046W RPS21AP0C0V8 87 aaKnown RBP4.46□□□□□ -1.7
TRM112YNR046W YEF3P16521 1044 aaKnown RBP4.46□□□□□ -1.7
TRM112YNR046W HEM12P32347 362 aaPredicted RBP4.46□□□□□ -1.7
TRM112YNR046W NIC96P34077 839 aa4.46□□□□□ -1.7
TRM112YNR046W YKL133CP36066 463 aa4.46□□□□□ -1.7
TRM112YNR046W APN2P38207 520 aa4.46□□□□□ -1.7
TRM112YNR046W YBR259WP38338 688 aa4.46□□□□□ -1.7
TRM112YNR046W SET2P46995 733 aaKnown RBP4.46□□□□□ -1.7
TRM112YNR046W INP52P50942 1183 aa4.46□□□□□ -1.7
TRM112YNR046W YNL034WP53963 612 aa4.46□□□□□ -1.7
TRM112YNR046W YNL018CP53976 612 aa4.46□□□□□ -1.7
TRM112YNR046W ARP4P80428 489 aa4.46□□□□□ -1.7
TRM112YNR046W YMR210WQ03649 449 aa4.46□□□□□ -1.7
TRM112YNR046W PEX19Q07418 342 aa4.46□□□□□ -1.7
TRM112YNR046W PEX15Q08215 383 aa4.46□□□□□ -1.7
TRM112YNR046W YLR415CO13578 112 aa4.45□□□□□ -1.7
TRM112YNR046W CDC6P09119 513 aa4.45□□□□□ -1.7
TRM112YNR046W SWI6P09959 803 aa4.45□□□□□ -1.7
TRM112YNR046W HCA4P20448 770 aaKnown RBP4.45□□□□□ -1.7
TRM112YNR046W PWP2P25635 923 aaKnown RBP4.45□□□□□ -1.7
TRM112YNR046W CDC20P26309 610 aa4.45□□□□□ -1.7
TRM112YNR046W SEC21P32074 935 aaKnown RBP4.45□□□□□ -1.7
TRM112YNR046W YKU70P32807 602 aa4.45□□□□□ -1.7
TRM112YNR046W APT2P36973 181 aa4.45□□□□□ -1.7
TRM112YNR046W YHR202WP38887 602 aa4.45□□□□□ -1.7
TRM112YNR046W BEM4P39011 633 aa4.45□□□□□ -1.7
TRM112YNR046W PRP31P49704 494 aaPredicted RBP4.45□□□□□ -1.7
TRM112YNR046W SPT20P50875 604 aa4.45□□□□□ -1.7
TRM112YNR046W TAN1P53072 289 aaPredicted RBP4.45□□□□□ -1.7
TRM112YNR046W BRE5P53741 515 aaKnown RBP4.45□□□□□ -1.7
TRM112YNR046W NPC2Q12408 173 aa4.45□□□□□ -1.7
TRM112YNR046W RPS13P05756 151 aaKnown RBP4.44□□□□□ -1.7
TRM112YNR046W PTP2P29461 750 aa4.44□□□□□ -1.7
TRM112YNR046W MAC1P35192 417 aa4.44□□□□□ -1.7
TRM112YNR046W LRG1P35688 1017 aa4.44□□□□□ -1.7
TRM112YNR046W AKL1P38080 1108 aaKnown RBP4.44□□□□□ -1.7
TRM112YNR046W RIM4P38741 713 aa4.44□□□□□ -1.7
TRM112YNR046W MSS4P38994 779 aa4.44□□□□□ -1.7
TRM112YNR046W PLB1P39105 664 aa4.44□□□□□ -1.7
TRM112YNR046W PIP2P52960 996 aa4.44□□□□□ -1.7
TRM112YNR046W HOL1P53389 586 aa4.44□□□□□ -1.7
TRM112YNR046W MET14Q02196 202 aa4.44□□□□□ -1.7
TRM112YNR046W YAP6Q03935 383 aa4.44□□□□□ -1.7
TRM112YNR046W YLR224WQ05947 369 aa4.44□□□□□ -1.7
TRM112YNR046W TUB3P09734 445 aaKnown RBP4.43□□□□□ -1.7
TRM112YNR046W KCC4P25389 1037 aa4.43□□□□□ -1.7
TRM112YNR046W DPB3P27344 201 aa4.43□□□□□ -1.7
TRM112YNR046W VPS24P36095 224 aaKnown RBP4.43□□□□□ -1.7
TRM112YNR046W FAT1P38225 669 aa4.43□□□□□ -1.7
TRM112YNR046W PMC1P38929 1173 aaPredicted RBP4.43□□□□□ -1.7
TRM112YNR046W ECM1P39715 212 aa4.43□□□□□ -1.7
TRM112YNR046W ENP2P48234 707 aaKnown RBP4.43□□□□□ -1.7
TRM112YNR046W PAP2P53632 584 aaKnown RBP4.43□□□□□ -1.7
TRM112YNR046W SUB1P54000 292 aaKnown RBP4.43□□□□□ -1.7
TRM112YNR046W ARG5,6Q01217 863 aa4.43□□□□□ -1.7
TRM112YNR046W REC102Q02721 264 aa4.43□□□□□ -1.7
TRM112YNR046W CEF1Q03654 590 aaPredicted RBP4.43□□□□□ -1.7
TRM112YNR046W YDR132CQ03900 495 aa4.43□□□□□ -1.7
TRM112YNR046W ASM4Q05166 528 aa4.43□□□□□ -1.7
TRM112YNR046W YLR407WQ06070 228 aa4.43□□□□□ -1.7
TRM112YNR046W ISA1Q07821 250 aaPredicted RBP4.43□□□□□ -1.7
TRM112YNR046W RRP6Q12149 733 aaKnown RBP4.43□□□□□ -1.7
TRM112YNR046W GPR1Q12361 961 aa4.43□□□□□ -1.7
TRM112YNR046W NOP56Q12460 504 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
TRM112YNR046W TRM11Q12463 433 aa4.43□□□□□ -1.7
TRM112YNR046W KCS1Q12494 1050 aa4.43□□□□□ -1.7
TRM112YNR046W SOD2P00447 233 aa4.42□□□□□ -1.7
TRM112YNR046W GAL1P04385 528 aa4.42□□□□□ -1.7
TRM112YNR046W DGR2P32330 852 aa4.42□□□□□ -1.7
TRM112YNR046W RPP1P38786 293 aa4.42□□□□□ -1.7
TRM112YNR046W DUN1P39009 513 aa4.42□□□□□ -1.7
TRM112YNR046W GID8P40208 455 aa4.42□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms