RNA–Protein interactions for RNA: YNR012W

URK1, Transcript of Uridine/cytidine kinase, yeast

Gene URK1, Length 1,506 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URK1	YNR012W	YMR206W	Q03695	313 aa		4.71	□□□□□ -1.66
URK1	YNR012W	YLR001C	Q07895	862 aa		4.71	□□□□□ -1.66
URK1	YNR012W	SIC1	P38634	284 aa		4.7	□□□□□ -1.66
URK1	YNR012W	NMD2	P38798	1089 aa	Known RBP	4.7	□□□□□ -1.66
URK1	YNR012W	MNN1	P39106	762 aa		4.7	□□□□□ -1.66
URK1	YNR012W	ATG33	Q06485	197 aa		4.7	□□□□□ -1.66
URK1	YNR012W	URN1	Q06525	465 aa	Known RBP	4.7	□□□□□ -1.66
URK1	YNR012W	PPR1	P07272	904 aa	Predicted RBP	4.69	□□□□□ -1.66
URK1	YNR012W	HMG1	P12683	1054 aa		4.69	□□□□□ -1.66
URK1	YNR012W	RPL8A	P17076	256 aa	Known RBP	4.69	□□□□□ -1.66
URK1	YNR012W	SFL1	P20134	766 aa		4.69	□□□□□ -1.66
URK1	YNR012W	PPS1	P38148	807 aa		4.69	□□□□□ -1.66
URK1	YNR012W	HSL7	P38274	827 aa		4.69	□□□□□ -1.66
URK1	YNR012W	YNL193W	P53870	558 aa		4.69	□□□□□ -1.66
URK1	YNR012W	DNM1	P54861	757 aa		4.69	□□□□□ -1.66
URK1	YNR012W	NOP14	Q99207	810 aa	Known RBP	4.69	□□□□□ -1.66
URK1	YNR012W	ECM5	Q03214	1411 aa		4.68	□□□□□ -1.66
URK1	YNR012W	YBR259W	P38338	688 aa		4.68	□□□□□ -1.66
URK1	YNR012W	PCM1	P38628	557 aa	Known RBP	4.68	□□□□□ -1.66
URK1	YNR012W	MIP6	P38760	659 aa	Known RBP	4.68	□□□□□ -1.66
URK1	YNR012W	PRP31	P49704	494 aa	Predicted RBP	4.68	□□□□□ -1.66
URK1	YNR012W	MET13	P53128	600 aa		4.68	□□□□□ -1.66
URK1	YNR012W	TEX1	P53851	422 aa	Known RBP	4.68	□□□□□ -1.66
URK1	YNR012W	MUK1	Q02866	612 aa		4.68	□□□□□ -1.66
URK1	YNR012W	ADY4	Q05955	493 aa		4.68	□□□□□ -1.66
URK1	YNR012W	RPN7	Q06103	429 aa	Known RBP	4.68	□□□□□ -1.66
URK1	YNR012W	ADE2	P21264	571 aa	Known RBP	4.67	□□□□□ -1.66
URK1	YNR012W	YIR042C	P40586	236 aa		4.67	□□□□□ -1.66
URK1	YNR012W	AMA1	P50082	593 aa		4.67	□□□□□ -1.66
URK1	YNR012W	ARP4	P80428	489 aa		4.67	□□□□□ -1.66
URK1	YNR012W	LEE1	Q02799	301 aa	Known RBP	4.67	□□□□□ -1.66
URK1	YNR012W	IRC13	Q08630	104 aa		4.67	□□□□□ -1.66
URK1	YNR012W	GIN4	Q12263	1142 aa		4.67	□□□□□ -1.66
URK1	YNR012W	YEL1	P34225	687 aa		4.67	□□□□□ -1.66
URK1	YNR012W	YHR112C	P38716	378 aa		4.67	□□□□□ -1.66
URK1	YNR012W	HOS4	P40480	1083 aa		4.67	□□□□□ -1.66
URK1	YNR012W	STB4	P50104	949 aa		4.67	□□□□□ -1.66
URK1	YNR012W	ORC4	P54791	529 aa		4.67	□□□□□ -1.66
URK1	YNR012W	LAT1	P12695	482 aa	Known RBP	4.66	□□□□□ -1.66
URK1	YNR012W	ERG6	P25087	383 aa	Known RBP	4.66	□□□□□ -1.66
URK1	YNR012W	MNN4	P36044	1178 aa		4.66	□□□□□ -1.66
URK1	YNR012W	YKR018C	P36114	725 aa		4.66	□□□□□ -1.66
URK1	YNR012W	MOH1	P38191	138 aa		4.66	□□□□□ -1.66
URK1	YNR012W	YJL163C	P46996	555 aa		4.66	□□□□□ -1.66
URK1	YNR012W	YBP2	P53169	641 aa		4.66	□□□□□ -1.66
URK1	YNR012W	CCR4	P31384	837 aa	Known RBP	4.65	□□□□□ -1.67
URK1	YNR012W	DOT6	P40059	670 aa	Known RBP	4.65	□□□□□ -1.67
URK1	YNR012W	ARG5,6	Q01217	863 aa		4.65	□□□□□ -1.67
URK1	YNR012W	ADR1	P07248	1323 aa		4.64	□□□□□ -1.67
URK1	YNR012W	OAR1	P35731	278 aa		4.64	□□□□□ -1.67
URK1	YNR012W	PCL10	P53124	433 aa		4.64	□□□□□ -1.67
URK1	YNR012W	MTL1	P53214	551 aa		4.64	□□□□□ -1.67
URK1	YNR012W	COG8	Q04632	607 aa		4.64	□□□□□ -1.67
URK1	YNR012W	GAD1	Q04792	585 aa		4.64	□□□□□ -1.67
URK1	YNR012W	RGC1	Q06108	1083 aa	Known RBP	4.64	□□□□□ -1.67
URK1	YNR012W	SFP1	P32432	683 aa		4.63	□□□□□ -1.67
URK1	YNR012W	HIS7	P33734	552 aa	Known RBP	4.63	□□□□□ -1.67
URK1	YNR012W	BCD1	P38772	366 aa		4.63	□□□□□ -1.67
URK1	YNR012W	LYS9	P38999	446 aa		4.63	□□□□□ -1.67
URK1	YNR012W	ECM1	P39715	212 aa		4.63	□□□□□ -1.67
URK1	YNR012W	BAP3	P41815	604 aa		4.63	□□□□□ -1.67
URK1	YNR012W	APL2	P36000	726 aa	Predicted RBP	4.62	□□□□□ -1.67
URK1	YNR012W	MGS1	P40151	587 aa		4.62	□□□□□ -1.67
URK1	YNR012W	BRE5	P53741	515 aa	Known RBP	4.62	□□□□□ -1.67
URK1	YNR012W	ACF2	Q12168	779 aa		4.62	□□□□□ -1.67
URK1	YNR012W	ATG11	Q12527	1178 aa		4.62	□□□□□ -1.67
URK1	YNR012W	HRP1	Q99383	534 aa	Known RBP	4.62	□□□□□ -1.67
URK1	YNR012W	REV3	P14284	1504 aa		4.62	□□□□□ -1.67
URK1	YNR012W	SPT6	P23615	1451 aa	Known RBP	4.62	□□□□□ -1.67
URK1	YNR012W	YJR142W	P47173	342 aa		4.62	□□□□□ -1.67
URK1	YNR012W	UBC11	P52492	156 aa		4.62	□□□□□ -1.67
URK1	YNR012W	SDA1	P53313	767 aa	Known RBP	4.62	□□□□□ -1.67
URK1	YNR012W	TMN2	Q04562	672 aa		4.62	□□□□□ -1.67
URK1	YNR012W	OMS1	Q06668	471 aa		4.62	□□□□□ -1.67
URK1	YNR012W	GUD1	Q07729	489 aa		4.62	□□□□□ -1.67
URK1	YNR012W	BUD4	P47136	1447 aa		4.61	□□□□□ -1.67
URK1	YNR012W	HIR1	P32479	840 aa		4.61	□□□□□ -1.67
URK1	YNR012W	MCH5	Q08777	521 aa		4.61	□□□□□ -1.67
URK1	YNR012W	DCS2	Q12123	353 aa		4.61	□□□□□ -1.67
URK1	YNR012W	THO2	P53552	1597 aa	Known RBP	4.6	□□□□□ -1.67
URK1	YNR012W	TRZ1	P36159	838 aa	Predicted RBP	4.6	□□□□□ -1.67
URK1	YNR012W	SSZ1	P38788	538 aa	Known RBP	4.6	□□□□□ -1.67
URK1	YNR012W	FMO1	P38866	432 aa		4.6	□□□□□ -1.67
URK1	YNR012W	YNL195C	P40168	261 aa		4.6	□□□□□ -1.67
URK1	YNR012W	GID8	P40208	455 aa		4.6	□□□□□ -1.67
URK1	YNR012W	CTK1	Q03957	528 aa	Known RBP	4.6	□□□□□ -1.67
URK1	YNR012W	MCM21	Q06675	368 aa		4.6	□□□□□ -1.67
URK1	YNR012W	MDS3	P53094	1487 aa		4.6	□□□□□ -1.67
URK1	YNR012W	RNR1	P21524	888 aa	Known RBP	4.59	□□□□□ -1.67
URK1	YNR012W	GET2	P40056	285 aa		4.59	□□□□□ -1.67
URK1	YNR012W	HLJ1	P48353	224 aa		4.59	□□□□□ -1.67
URK1	YNR012W	UTP14	Q04500	899 aa	Known RBP	4.59	□□□□□ -1.67
URK1	YNR012W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
URK1	YNR012W	AKL1	P38080	1108 aa	Known RBP	4.58	□□□□□ -1.68
URK1	YNR012W	YHL017W	P38745	532 aa		4.58	□□□□□ -1.68
URK1	YNR012W	PCL5	P38794	229 aa		4.58	□□□□□ -1.68
URK1	YNR012W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
URK1	YNR012W	FMP52	P40008	231 aa		4.58	□□□□□ -1.68
URK1	YNR012W	SET2	P46995	733 aa	Known RBP	4.58	□□□□□ -1.68
URK1	YNR012W	YJR039W	P47107	1121 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 70.1 ms