RNA–Protein interactions for RNA: YNR004W

SWM2, Transcript of Protein with a role in snRNA and snoRNA cap trimethylation, yeastyeast

Gene SWM2, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWM2YNR004W PAN2P53010 1115 aaPredicted RBP3.56□□□□□ -1.84
SWM2YNR004W NOG2P53742 486 aaKnown RBP3.56□□□□□ -1.84
SWM2YNR004W ALD6P54115 500 aaKnown RBP3.56□□□□□ -1.84
SWM2YNR004W OPI10Q08202 246 aa3.56□□□□□ -1.84
SWM2YNR004W YOR131CQ12486 218 aa3.56□□□□□ -1.84
SWM2YNR004W PRP9P19736 530 aaKnown RBP3.55□□□□□ -1.84
SWM2YNR004W PRI2P20457 528 aa3.55□□□□□ -1.84
SWM2YNR004W HBS1P32769 611 aaKnown RBP3.55□□□□□ -1.84
SWM2YNR004W YBR259WP38338 688 aa3.55□□□□□ -1.84
SWM2YNR004W HRB1P38922 454 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
SWM2YNR004W CHZ1P40019 153 aaPredicted RBP3.55□□□□□ -1.84
SWM2YNR004W MEP2P41948 499 aa3.55□□□□□ -1.84
SWM2YNR004W NAN1Q02931 896 aaKnown RBP3.55□□□□□ -1.84
SWM2YNR004W ENV7Q12003 364 aa3.55□□□□□ -1.84
SWM2YNR004W YOL098CQ12496 1037 aa3.55□□□□□ -1.84
SWM2YNR004W TOP3P13099 656 aa3.54□□□□□ -1.84
SWM2YNR004W MVD1P32377 396 aaKnown RBP3.54□□□□□ -1.84
SWM2YNR004W CDC11P32458 415 aa3.54□□□□□ -1.84
SWM2YNR004W TEX1P53851 422 aaKnown RBP3.54□□□□□ -1.84
SWM2YNR004W SSF2Q12153 453 aaPredicted RBP3.54□□□□□ -1.84
SWM2YNR004W YPR071WQ12346 211 aa3.54□□□□□ -1.84
SWM2YNR004W OSH2Q12451 1283 aa3.54□□□□□ -1.84
SWM2YNR004W YTA7P40340 1379 aa3.53□□□□□ -1.84
SWM2YNR004W PHR1P05066 565 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
SWM2YNR004W GRX1P25373 110 aaKnown RBP3.53□□□□□ -1.84
SWM2YNR004W SAP190P36123 1033 aa3.53□□□□□ -1.84
SWM2YNR004W SPF1P39986 1215 aaKnown RBP3.53□□□□□ -1.84
SWM2YNR004W NIT3P49954 291 aa3.53□□□□□ -1.84
SWM2YNR004W ATG4P53867 494 aa3.53□□□□□ -1.84
SWM2YNR004W FMP30Q02883 468 aa3.53□□□□□ -1.84
SWM2YNR004W TDA5Q06417 326 aaKnown RBP3.53□□□□□ -1.84
SWM2YNR004W DAL7P21826 554 aa3.52□□□□□ -1.85
SWM2YNR004W RPA135P22138 1203 aaKnown RBP3.52□□□□□ -1.85
SWM2YNR004W SRP40P32583 406 aaPredicted RBP3.52□□□□□ -1.85
SWM2YNR004W NMD2P38798 1089 aaKnown RBP3.52□□□□□ -1.85
SWM2YNR004W MTR3P48240 250 aaPredicted RBP3.52□□□□□ -1.85
SWM2YNR004W ERP6P53198 216 aa3.52□□□□□ -1.85
SWM2YNR004W GPR1Q12361 961 aa3.52□□□□□ -1.85
SWM2YNR004W STE4P18851 423 aa3.51□□□□□ -1.85
SWM2YNR004W PHO11P35842 467 aa3.51□□□□□ -1.85
SWM2YNR004W YBR284WP38150 797 aa3.51□□□□□ -1.85
SWM2YNR004W PHO12P38693 467 aa3.51□□□□□ -1.85
SWM2YNR004W FMO1P38866 432 aa3.51□□□□□ -1.85
SWM2YNR004W HUL4P40985 892 aa3.51□□□□□ -1.85
SWM2YNR004W UTP8P53276 713 aaKnown RBP3.51□□□□□ -1.85
SWM2YNR004W FHN1P53279 174 aa3.51□□□□□ -1.85
SWM2YNR004W TAD1P53065 400 aa3.5□□□□□ -1.85
SWM2YNR004W RPN4Q03465 531 aa3.5□□□□□ -1.85
SWM2YNR004W LRS4Q04087 347 aaKnown RBP3.5□□□□□ -1.85
SWM2YNR004W UTP14Q04500 899 aaKnown RBP3.5□□□□□ -1.85
SWM2YNR004W NSE3Q05541 303 aa3.5□□□□□ -1.85
SWM2YNR004W HSP60P19882 572 aaKnown RBP3.49□□□□□ -1.85
SWM2YNR004W YCL002CP25565 263 aa3.49□□□□□ -1.85
SWM2YNR004W ECM1P39715 212 aa3.49□□□□□ -1.85
SWM2YNR004W MTL1P53214 551 aa3.49□□□□□ -1.85
SWM2YNR004W STP1Q00947 519 aa3.49□□□□□ -1.85
SWM2YNR004W CTK1Q03957 528 aaKnown RBP3.49□□□□□ -1.85
SWM2YNR004W THI21Q08975 551 aa3.49□□□□□ -1.85
SWM2YNR004W APN1P22936 367 aa3.48□□□□□ -1.85
SWM2YNR004W SET5P38890 526 aaKnown RBP3.48□□□□□ -1.85
SWM2YNR004W DOS2P54858 310 aa3.48□□□□□ -1.85
SWM2YNR004W STE12P13574 688 aa3.47□□□□□ -1.85
SWM2YNR004W GAL11P19659 1081 aa3.47□□□□□ -1.85
SWM2YNR004W FUB1P25659 250 aa3.47□□□□□ -1.85
SWM2YNR004W PET10P36139 283 aa3.47□□□□□ -1.85
SWM2YNR004W YBR184WP38299 523 aa3.47□□□□□ -1.85
SWM2YNR004W NUP60P39705 539 aa3.47□□□□□ -1.85
SWM2YNR004W YBP2P53169 641 aa3.47□□□□□ -1.85
SWM2YNR004W YPL068CQ02749 293 aa3.47□□□□□ -1.85
SWM2YNR004W EAF1Q06337 982 aa3.47□□□□□ -1.85
SWM2YNR004W GEP3Q08622 556 aa3.47□□□□□ -1.85
SWM2YNR004W CDC53Q12018 815 aaKnown RBP3.47□□□□□ -1.85
SWM2YNR004W MLH3Q12083 715 aa3.47□□□□□ -1.85
SWM2YNR004W USV1Q12132 391 aa3.47□□□□□ -1.85
SWM2YNR004W RAD4P14736 754 aa3.46□□□□□ -1.86
SWM2YNR004W MSD1P15179 658 aaKnown RBP3.46□□□□□ -1.86
SWM2YNR004W KCC4P25389 1037 aa3.46□□□□□ -1.86
SWM2YNR004W RPL8BP29453 256 aaKnown RBP3.46□□□□□ -1.86
SWM2YNR004W RRP14P36080 434 aaKnown RBP3.46□□□□□ -1.86
SWM2YNR004W GMH1P36125 273 aa3.46□□□□□ -1.86
SWM2YNR004W ALR2P43553 858 aa3.46□□□□□ -1.86
SWM2YNR004W POB3Q04636 552 aaKnown RBP3.46□□□□□ -1.86
SWM2YNR004W YDL124WQ07551 312 aaKnown RBP3.46□□□□□ -1.86
SWM2YNR004W FMP25Q08023 583 aa3.46□□□□□ -1.86
SWM2YNR004W FLC1Q08967 793 aa3.46□□□□□ -1.86
SWM2YNR004W CIT1P00890 479 aa3.45□□□□□ -1.86
SWM2YNR004W THR1P17423 357 aaKnown RBP3.45□□□□□ -1.86
SWM2YNR004W SAT4P25333 603 aaKnown RBP3.45□□□□□ -1.86
SWM2YNR004W STE5P32917 917 aa3.45□□□□□ -1.86
SWM2YNR004W YKL091CP33324 310 aaKnown RBP3.45□□□□□ -1.86
SWM2YNR004W FPR3P38911 411 aaKnown RBP3.45□□□□□ -1.86
SWM2YNR004W LYS9P38999 446 aa3.45□□□□□ -1.86
SWM2YNR004W PFD1P46988 109 aa3.45□□□□□ -1.86
SWM2YNR004W TIM54P47045 478 aa3.45□□□□□ -1.86
SWM2YNR004W PRP31P49704 494 aaPredicted RBP3.45□□□□□ -1.86
SWM2YNR004W YGR125WP53273 1036 aa3.45□□□□□ -1.86
SWM2YNR004W YLR125WQ12138 136 aa3.45□□□□□ -1.86
SWM2YNR004W ADE5,7P07244 802 aaKnown RBP3.44□□□□□ -1.86
SWM2YNR004W ARE1P25628 610 aa3.44□□□□□ -1.86
SWM2YNR004W ULP2P40537 1034 aaPredicted RBP3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms