RNA–Protein interactions for RNA: YNL209W

SSB2, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB2, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB2	YNL209W	MUD2	P36084	527 aa	Known RBP	4.95	□□□□□ -1.62
SSB2	YNL209W	VAB2	P40003	282 aa		4.95	□□□□□ -1.62
SSB2	YNL209W	KAP123	P40069	1113 aa	Known RBP	4.95	□□□□□ -1.62
SSB2	YNL209W	HXT8	P40886	569 aa		4.95	□□□□□ -1.62
SSB2	YNL209W	SEC26	P41810	973 aa	Known RBP	4.95	□□□□□ -1.62
SSB2	YNL209W	YNL320W	P42840	284 aa		4.95	□□□□□ -1.62
SSB2	YNL209W	OCA1	P50946	238 aa	Predicted RBP	4.95	□□□□□ -1.62
SSB2	YNL209W	ELA1	P53861	379 aa	Predicted RBP	4.95	□□□□□ -1.62
SSB2	YNL209W	TBF1	Q02457	562 aa		4.95	□□□□□ -1.62
SSB2	YNL209W	YDR090C	Q03193	310 aa		4.95	□□□□□ -1.62
SSB2	YNL209W	ECI1	Q05871	280 aa		4.95	□□□□□ -1.62
SSB2	YNL209W	CUR1	Q06469	252 aa		4.95	□□□□□ -1.62
SSB2	YNL209W	PUS1	Q12211	544 aa	Known RBP	4.95	□□□□□ -1.62
SSB2	YNL209W	DAL2	P25335	343 aa		4.94	□□□□□ -1.62
SSB2	YNL209W	ARC19	P33204	171 aa	Known RBP	4.94	□□□□□ -1.62
SSB2	YNL209W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
SSB2	YNL209W	YKR018C	P36114	725 aa		4.94	□□□□□ -1.62
SSB2	YNL209W	LAS1	P36146	502 aa	Predicted RBP	4.94	□□□□□ -1.62
SSB2	YNL209W	MRX3	P38172	270 aa		4.94	□□□□□ -1.62
SSB2	YNL209W	MUM2	P38236	366 aa		4.94	□□□□□ -1.62
SSB2	YNL209W	HIS2	P38635	335 aa		4.94	□□□□□ -1.62
SSB2	YNL209W	LCP5	P40079	357 aa	Predicted RBP	4.94	□□□□□ -1.62
SSB2	YNL209W	MEP1	P40260	492 aa		4.94	□□□□□ -1.62
SSB2	YNL209W	NMD5	P46970	1048 aa		4.94	□□□□□ -1.62
SSB2	YNL209W	RPC17	P47076	161 aa		4.94	□□□□□ -1.62
SSB2	YNL209W	RPS7B	P48164	190 aa	Known RBP	4.94	□□□□□ -1.62
SSB2	YNL209W	ORC5	P50874	479 aa		4.94	□□□□□ -1.62
SSB2	YNL209W	YGL140C	P53120	1219 aa		4.94	□□□□□ -1.62
SSB2	YNL209W	RIM8	P53179	542 aa		4.94	□□□□□ -1.62
SSB2	YNL209W	RTT102	P53330	157 aa		4.94	□□□□□ -1.62
SSB2	YNL209W	ESBP6	P53918	673 aa		4.94	□□□□□ -1.62
SSB2	YNL209W	YMR018W	Q04364	514 aa		4.94	□□□□□ -1.62
SSB2	YNL209W	YMR321C	Q04898	105 aa		4.94	□□□□□ -1.62
SSB2	YNL209W	RGA2	Q06407	1009 aa		4.94	□□□□□ -1.62
SSB2	YNL209W	OMS1	Q06668	471 aa		4.94	□□□□□ -1.62
SSB2	YNL209W	SMC5	Q08204	1093 aa		4.94	□□□□□ -1.62
SSB2	YNL209W	SPO21	Q12411	609 aa		4.94	□□□□□ -1.62
SSB2	YNL209W	YLR462W	O13556	202 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	ARG4	P04076	463 aa	Predicted RBP	4.93	□□□□□ -1.62
SSB2	YNL209W	PRP9	P19736	530 aa	Known RBP	4.93	□□□□□ -1.62
SSB2	YNL209W	GPI10	P30777	616 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	EUG1	P32474	517 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	DBP7	P36120	742 aa	Known RBP	4.93	□□□□□ -1.62
SSB2	YNL209W	NCL1	P38205	684 aa	Known RBP	4.93	□□□□□ -1.62
SSB2	YNL209W	OLA1	P38219	394 aa	Known RBP	4.93	□□□□□ -1.62
SSB2	YNL209W	RRT2	P38332	387 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	RCK2	P38623	610 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	YHL049C	P38722	271 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	YLF2	P38746	405 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	YEL075C	P39972	122 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	EAF5	P39995	279 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	YER189W	P40104	122 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	YFL064C	P43540	174 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	CPR7	P47103	393 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	VPS70	P47161	811 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	SGM1	P47166	707 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	MRS2	Q01926	470 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	ROD1	Q02805	837 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	DON1	Q05610	365 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	IES4	Q08561	116 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	CDC53	Q12018	815 aa	Known RBP	4.93	□□□□□ -1.62
SSB2	YNL209W	AIM41	Q12032	185 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	SEC39	Q12745	709 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	YBL111C	Q3E7Y5	667 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	BRR1	Q99177	341 aa	Predicted RBP	4.93	□□□□□ -1.62
SSB2	YNL209W	CDC19	P00549	500 aa	Known RBP	4.93	□□□□□ -1.62
SSB2	YNL209W	FAR1	P21268	830 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	RME1	P32338	300 aa	Known RBP	4.93	□□□□□ -1.62
SSB2	YNL209W	DPH5	P32469	300 aa	Predicted RBP	4.93	□□□□□ -1.62
SSB2	YNL209W	COT1	P32798	439 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	GYP6	P32806	458 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	SLD2	P34252	453 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	BLI1	P35727	113 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	TVP38	P36164	337 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
SSB2	YNL209W	TDA3	P38758	523 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	VPS29	P38759	282 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	ERP2	P39704	215 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	GPB2	P39717	880 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	MPH1	P40562	993 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	SAD1	P43589	448 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	YJR079W	P47126	109 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	ACF4	P47129	309 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	RAD17	P48581	401 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	SCS3	P53012	380 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	YGR125W	P53273	1036 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	YNL146W	P53906	100 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	RNT1	Q02555	471 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	COQ9	Q05779	260 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	YDL121C	Q07541	149 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	TY4A-H	Q6Q5P6	413 aa		4.93	□□□□□ -1.62
SSB2	YNL209W	SNF1	P06782	633 aa	Known RBP	4.92	□□□□□ -1.62
SSB2	YNL209W	VMA1	P17255	1071 aa	Known RBP	4.92	□□□□□ -1.62
SSB2	YNL209W	IRE1	P32361	1115 aa		4.92	□□□□□ -1.62
SSB2	YNL209W	ACP1	P32463	125 aa		4.92	□□□□□ -1.62
SSB2	YNL209W	VPS35	P34110	944 aa		4.92	□□□□□ -1.62
SSB2	YNL209W	EXO84	P38261	753 aa		4.92	□□□□□ -1.62
SSB2	YNL209W	CCT2	P39076	527 aa	Known RBP	4.92	□□□□□ -1.62
SSB2	YNL209W	PSY2	P40164	858 aa		4.92	□□□□□ -1.62
SSB2	YNL209W	YIL089W	P40500	205 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 175.5 ms