RNA–Protein interactions for RNA: YMR260C

TIF11, Transcript of Translation initiation factor eIF1A, yeast

Gene TIF11, Length 462 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF11	YMR260C	TUB1	P09733	447 aa	Known RBP	3.75	□□□□□ -1.81
TIF11	YMR260C	HIS7	P33734	552 aa	Known RBP	3.75	□□□□□ -1.81
TIF11	YMR260C	YDR338C	Q05497	695 aa		3.75	□□□□□ -1.81
TIF11	YMR260C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	3.74	□□□□□ -1.81	not detected
TIF11	YMR260C	MET6	P05694	767 aa	Known RBP	3.74	□□□□□ -1.81
TIF11	YMR260C	PYC1	P11154	1178 aa	Known RBP	3.74	□□□□□ -1.81
TIF11	YMR260C	PPZ2	P33329	710 aa		3.74	□□□□□ -1.81
TIF11	YMR260C	APL2	P36000	726 aa	Predicted RBP	3.74	□□□□□ -1.81
TIF11	YMR260C	RIX1	P38883	763 aa	Predicted RBP	3.74	□□□□□ -1.81
TIF11	YMR260C	REV7	P38927	245 aa		3.74	□□□□□ -1.81
TIF11	YMR260C	CCT7	P42943	550 aa	Known RBP	3.74	□□□□□ -1.81
TIF11	YMR260C	YBP2	P53169	641 aa		3.74	□□□□□ -1.81
TIF11	YMR260C	ARO10	Q06408	635 aa		3.74	□□□□□ -1.81
TIF11	YMR260C	MCM21	Q06675	368 aa		3.74	□□□□□ -1.81
TIF11	YMR260C	YNL162W-A	Q3E7A8	72 aa		3.74	□□□□□ -1.81
TIF11	YMR260C	YKL033W-A	Q86ZR7	236 aa		3.74	□□□□□ -1.81
TIF11	YMR260C	STI1	P15705	589 aa	Known RBP RIP-Chip data	3.73	□□□□□ -1.81	not detected
TIF11	YMR260C	ADY2	P25613	283 aa		3.73	□□□□□ -1.81
TIF11	YMR260C	YJL206C	P39529	758 aa		3.73	□□□□□ -1.81
TIF11	YMR260C	NDC80	P40460	691 aa		3.73	□□□□□ -1.81
TIF11	YMR260C	SNM1	P40993	198 aa		3.73	□□□□□ -1.81
TIF11	YMR260C	ALY2	P47029	1046 aa		3.73	□□□□□ -1.81
TIF11	YMR260C	PRP31	P49704	494 aa	Predicted RBP	3.73	□□□□□ -1.81
TIF11	YMR260C	ARG5,6	Q01217	863 aa		3.73	□□□□□ -1.81
TIF11	YMR260C	HMO1	Q03973	246 aa	Known RBP	3.73	□□□□□ -1.81
TIF11	YMR260C	NSE3	Q05541	303 aa		3.73	□□□□□ -1.81
TIF11	YMR260C	MTC2	P34246	357 aa		3.72	□□□□□ -1.81
TIF11	YMR260C	FLO10	P36170	1169 aa		3.72	□□□□□ -1.81
TIF11	YMR260C	CBR1	P38626	284 aa	Known RBP	3.72	□□□□□ -1.81
TIF11	YMR260C	BDH2	P39713	417 aa		3.72	□□□□□ -1.81
TIF11	YMR260C	ARG2	P40360	574 aa		3.72	□□□□□ -1.81
TIF11	YMR260C	BNA2	P47125	453 aa		3.72	□□□□□ -1.81
TIF11	YMR260C	FHN1	P53279	174 aa		3.72	□□□□□ -1.81
TIF11	YMR260C	APM1	Q00776	475 aa	Predicted RBP	3.72	□□□□□ -1.81
TIF11	YMR260C	CTK1	Q03957	528 aa	Known RBP	3.72	□□□□□ -1.81
TIF11	YMR260C	ADE2	P21264	571 aa	Known RBP	3.71	□□□□□ -1.82
TIF11	YMR260C	PER1	P25625	357 aa		3.71	□□□□□ -1.82
TIF11	YMR260C	TRZ1	P36159	838 aa	Predicted RBP	3.71	□□□□□ -1.82
TIF11	YMR260C	YHR112C	P38716	378 aa		3.71	□□□□□ -1.82
TIF11	YMR260C	MIP6	P38760	659 aa	Known RBP	3.71	□□□□□ -1.82
TIF11	YMR260C	FMO1	P38866	432 aa		3.71	□□□□□ -1.82
TIF11	YMR260C	LYS9	P38999	446 aa		3.71	□□□□□ -1.82
TIF11	YMR260C	NUP60	P39705	539 aa		3.71	□□□□□ -1.82
TIF11	YMR260C	GDH3	P39708	457 aa		3.71	□□□□□ -1.82
TIF11	YMR260C	CLF1	Q12309	687 aa	Predicted RBP	3.71	□□□□□ -1.82
TIF11	YMR260C	YLR149C	Q99296	730 aa		3.71	□□□□□ -1.82
TIF11	YMR260C	RPN13	O13563	156 aa		3.7	□□□□□ -1.82
TIF11	YMR260C	APT2	P36973	181 aa		3.7	□□□□□ -1.82
TIF11	YMR260C	CHZ1	P40019	153 aa	Predicted RBP	3.7	□□□□□ -1.82
TIF11	YMR260C	GID8	P40208	455 aa		3.7	□□□□□ -1.82
TIF11	YMR260C	PAN2	P53010	1115 aa	Predicted RBP	3.7	□□□□□ -1.82
TIF11	YMR260C	MAL11	P53048	616 aa		3.7	□□□□□ -1.82
TIF11	YMR260C	MTL1	P53214	551 aa		3.7	□□□□□ -1.82
TIF11	YMR260C	PEX2	P32800	271 aa		3.69	□□□□□ -1.82
TIF11	YMR260C	MCD4	P36051	919 aa		3.69	□□□□□ -1.82
TIF11	YMR260C	UBS1	P38290	277 aa		3.69	□□□□□ -1.82
TIF11	YMR260C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	3.69	□□□□□ -1.82	not detected
TIF11	YMR260C	YEL020C	P39994	560 aa		3.69	□□□□□ -1.82
TIF11	YMR260C	ATG4	P53867	494 aa		3.69	□□□□□ -1.82
TIF11	YMR260C	ORC4	P54791	529 aa		3.69	□□□□□ -1.82
TIF11	YMR260C	HOF1	Q05080	669 aa		3.69	□□□□□ -1.82
TIF11	YMR260C	MDM12	Q92328	271 aa		3.69	□□□□□ -1.82
TIF11	YMR260C	HRP1	Q99383	534 aa	Known RBP	3.69	□□□□□ -1.82
TIF11	YMR260C	MVD1	P32377	396 aa	Known RBP	3.68	□□□□□ -1.82
TIF11	YMR260C	EMP70	P32802	667 aa		3.68	□□□□□ -1.82
TIF11	YMR260C	STO1	P34160	861 aa	Known RBP	3.68	□□□□□ -1.82
TIF11	YMR260C	GLG1	P36143	616 aa		3.68	□□□□□ -1.82
TIF11	YMR260C	NNF1	P47149	201 aa		3.68	□□□□□ -1.82
TIF11	YMR260C	SNP1	Q00916	300 aa	Predicted RBP	3.68	□□□□□ -1.82
TIF11	YMR260C	CDC53	Q12018	815 aa	Known RBP	3.68	□□□□□ -1.82
TIF11	YMR260C	SPO11	P23179	398 aa		3.67	□□□□□ -1.82
TIF11	YMR260C	PHO11	P35842	467 aa		3.67	□□□□□ -1.82
TIF11	YMR260C	PHO12	P38693	467 aa		3.67	□□□□□ -1.82
TIF11	YMR260C	SFB3	P38810	929 aa		3.67	□□□□□ -1.82
TIF11	YMR260C	CAF16	P43569	289 aa		3.67	□□□□□ -1.82
TIF11	YMR260C	CTR1	P49573	406 aa		3.67	□□□□□ -1.82
TIF11	YMR260C	MRK1	P50873	501 aa		3.67	□□□□□ -1.82
TIF11	YMR260C	REC102	Q02721	264 aa		3.67	□□□□□ -1.82
TIF11	YMR260C	THR1	P17423	357 aa	Known RBP	3.66	□□□□□ -1.82
TIF11	YMR260C	RPN10	P38886	268 aa	Known RBP	3.66	□□□□□ -1.82
TIF11	YMR260C	YFL052W	P43551	465 aa		3.66	□□□□□ -1.82
TIF11	YMR260C	MIH1	P23748	554 aa		3.65	□□□□□ -1.83
TIF11	YMR260C	PEX1	P24004	1043 aa		3.65	□□□□□ -1.83
TIF11	YMR260C	ERG6	P25087	383 aa	Known RBP	3.65	□□□□□ -1.83
TIF11	YMR260C	YKR018C	P36114	725 aa		3.65	□□□□□ -1.83
TIF11	YMR260C	PAC2	P39937	518 aa		3.65	□□□□□ -1.83
TIF11	YMR260C	GET2	P40056	285 aa		3.65	□□□□□ -1.83
TIF11	YMR260C	PCL10	P53124	433 aa		3.65	□□□□□ -1.83
TIF11	YMR260C	RPN4	Q03465	531 aa		3.65	□□□□□ -1.83
TIF11	YMR260C	CDC9	P04819	755 aa		3.64	□□□□□ -1.83
TIF11	YMR260C	ERR1	P0CX10	437 aa		3.64	□□□□□ -1.83
TIF11	YMR260C	ERR2	P0CX11	437 aa		3.64	□□□□□ -1.83
TIF11	YMR260C	RNR1	P21524	888 aa	Known RBP	3.64	□□□□□ -1.83
TIF11	YMR260C	GSY1	P23337	708 aa		3.64	□□□□□ -1.83
TIF11	YMR260C	YKR051W	P36142	418 aa		3.64	□□□□□ -1.83
TIF11	YMR260C	MUP3	P38734	546 aa		3.64	□□□□□ -1.83
TIF11	YMR260C	CRP1	P38845	465 aa	Known RBP	3.64	□□□□□ -1.83
TIF11	YMR260C	NPY1	P53164	384 aa		3.64	□□□□□ -1.83
TIF11	YMR260C	RGC1	Q06108	1083 aa	Known RBP	3.64	□□□□□ -1.83
TIF11	YMR260C	AFT2	Q08957	416 aa		3.64	□□□□□ -1.83

Retrieved 100 of 5,963 RNA–protein pairs in 37.3 ms