RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W KTR4P38131 464 aa5.58□□□□□ -1.52
ROT1YMR200W YHL041WP38730 149 aa5.58□□□□□ -1.52
ROT1YMR200W ESL1P40456 1118 aa5.58□□□□□ -1.52
ROT1YMR200W TMA108P40462 946 aa5.58□□□□□ -1.52
ROT1YMR200W VTC2P43585 828 aa5.58□□□□□ -1.52
ROT1YMR200W RSC8P43609 557 aaKnown RBP5.58□□□□□ -1.52
ROT1YMR200W CHA4P43634 648 aa5.58□□□□□ -1.52
ROT1YMR200W GUS1P46655 708 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
ROT1YMR200W RSC1P53236 928 aa5.58□□□□□ -1.52
ROT1YMR200W PAP2P53632 584 aaKnown RBP5.58□□□□□ -1.52
ROT1YMR200W SNP1Q00916 300 aaPredicted RBP5.58□□□□□ -1.52
ROT1YMR200W NEW1Q08972 1196 aaKnown RBP5.58□□□□□ -1.52
ROT1YMR200W PUS9Q12069 462 aa5.58□□□□□ -1.52
ROT1YMR200W DCG1P32460 244 aa5.57□□□□□ -1.52
ROT1YMR200W RRN3P36070 627 aa5.57□□□□□ -1.52
ROT1YMR200W RRP8P38961 392 aaKnown RBP5.57□□□□□ -1.52
ROT1YMR200W DOT6P40059 670 aaKnown RBP5.57□□□□□ -1.52
ROT1YMR200W IML2P47031 731 aa5.57□□□□□ -1.52
ROT1YMR200W BNA1P47096 177 aa5.57□□□□□ -1.52
ROT1YMR200W SUN4P53616 420 aa5.57□□□□□ -1.52
ROT1YMR200W YLR352WQ06479 807 aa5.57□□□□□ -1.52
ROT1YMR200W WHI4Q07655 649 aaKnown RBP5.57□□□□□ -1.52
ROT1YMR200W YDR056CQ12025 205 aa5.57□□□□□ -1.52
ROT1YMR200W MED1Q12321 566 aa5.57□□□□□ -1.52
ROT1YMR200W KCS1Q12494 1050 aa5.57□□□□□ -1.52
ROT1YMR200W HBN1Q96VH4 193 aa5.57□□□□□ -1.52
ROT1YMR200W HSF1P10961 833 aa5.56□□□□□ -1.52
ROT1YMR200W TOP3P13099 656 aa5.56□□□□□ -1.52
ROT1YMR200W AEP2P22136 580 aa5.56□□□□□ -1.52
ROT1YMR200W PRP19P32523 503 aaKnown RBP5.56□□□□□ -1.52
ROT1YMR200W HIS6P40545 261 aa5.56□□□□□ -1.52
ROT1YMR200W SLI1P53304 468 aa5.56□□□□□ -1.52
ROT1YMR200W SRP1Q02821 542 aaKnown RBP5.56□□□□□ -1.52
ROT1YMR200W RAD53P22216 821 aa5.55□□□□□ -1.52
ROT1YMR200W NPP1P25353 742 aa5.55□□□□□ -1.52
ROT1YMR200W AFR1P33304 620 aa5.55□□□□□ -1.52
ROT1YMR200W DUG1P43616 481 aaKnown RBP5.55□□□□□ -1.52
ROT1YMR200W MSE1P48525 536 aa5.55□□□□□ -1.52
ROT1YMR200W EXG2P52911 562 aa5.55□□□□□ -1.52
ROT1YMR200W MET13P53128 600 aa5.55□□□□□ -1.52
ROT1YMR200W VPS30Q02948 557 aa5.55□□□□□ -1.52
ROT1YMR200W RAD18P10862 487 aa5.54□□□□□ -1.52
ROT1YMR200W URA1P28272 314 aaPredicted RBP5.54□□□□□ -1.52
ROT1YMR200W PMI40P29952 429 aaKnown RBP5.54□□□□□ -1.52
ROT1YMR200W YBR284WP38150 797 aa5.54□□□□□ -1.52
ROT1YMR200W TSL1P38427 1098 aaKnown RBP5.54□□□□□ -1.52
ROT1YMR200W APE4P38821 490 aa5.54□□□□□ -1.52
ROT1YMR200W GPP2P40106 250 aaKnown RBP5.54□□□□□ -1.52
ROT1YMR200W NIT2P47016 307 aa5.54□□□□□ -1.52
ROT1YMR200W YJR096WP47137 282 aa5.54□□□□□ -1.52
ROT1YMR200W GYP7P48365 746 aa5.54□□□□□ -1.52
ROT1YMR200W ERO1Q03103 563 aa5.54□□□□□ -1.52
ROT1YMR200W YMR018WQ04364 514 aa5.54□□□□□ -1.52
ROT1YMR200W PHM6Q05637 104 aa5.54□□□□□ -1.52
ROT1YMR200W YDR306CQ06640 478 aa5.54□□□□□ -1.52
ROT1YMR200W PNS1Q12412 539 aa5.54□□□□□ -1.52
ROT1YMR200W CYB2P00175 591 aa5.53□□□□□ -1.52
ROT1YMR200W PHO81P17442 1178 aa5.53□□□□□ -1.52
ROT1YMR200W MSM1P22438 575 aa5.53□□□□□ -1.52
ROT1YMR200W IMP2'P32351 346 aa5.53□□□□□ -1.52
ROT1YMR200W HBS1P32769 611 aaKnown RBP5.53□□□□□ -1.52
ROT1YMR200W PEX5P35056 612 aa5.53□□□□□ -1.52
ROT1YMR200W MSS4P38994 779 aa5.53□□□□□ -1.52
ROT1YMR200W ACA1P39970 489 aa5.53□□□□□ -1.52
ROT1YMR200W YER158CP40095 573 aa5.53□□□□□ -1.52
ROT1YMR200W NCS6P53088 359 aa5.53□□□□□ -1.52
ROT1YMR200W KIN4Q01919 800 aa5.53□□□□□ -1.52
ROT1YMR200W IRC3Q06683 689 aa5.53□□□□□ -1.52
ROT1YMR200W OPY2Q06810 360 aa5.53□□□□□ -1.52
ROT1YMR200W YTM1Q12024 460 aaPredicted RBP5.53□□□□□ -1.52
ROT1YMR200W NPC2Q12408 173 aa5.53□□□□□ -1.52
ROT1YMR200W LAS17Q12446 633 aa5.53□□□□□ -1.52
ROT1YMR200W CDC9P04819 755 aa5.52□□□□□ -1.53
ROT1YMR200W SRD1P09007 221 aa5.52□□□□□ -1.53
ROT1YMR200W NUP120P35729 1037 aa5.52□□□□□ -1.53
ROT1YMR200W DEF1P35732 738 aaKnown RBP5.52□□□□□ -1.53
ROT1YMR200W YKL050CP35736 922 aa5.52□□□□□ -1.53
ROT1YMR200W ERT1P38140 529 aa5.52□□□□□ -1.53
ROT1YMR200W PES4P39684 611 aa5.52□□□□□ -1.53
ROT1YMR200W OAF1P39720 1047 aaPredicted RBP5.52□□□□□ -1.53
ROT1YMR200W URM1P40554 99 aaPredicted RBP5.52□□□□□ -1.53
ROT1YMR200W UBP6P43593 499 aaKnown RBP5.52□□□□□ -1.53
ROT1YMR200W PSP2P50109 593 aaKnown RBP5.52□□□□□ -1.53
ROT1YMR200W RCF1Q03713 159 aa5.52□□□□□ -1.53
ROT1YMR200W PFK1P16861 987 aaKnown RBP5.51□□□□□ -1.53
ROT1YMR200W SFL1P20134 766 aa5.51□□□□□ -1.53
ROT1YMR200W CDC60P26637 1090 aaKnown RBP5.51□□□□□ -1.53
ROT1YMR200W PPH3P32345 308 aa5.51□□□□□ -1.53
ROT1YMR200W VPH1P32563 840 aaKnown RBP5.51□□□□□ -1.53
ROT1YMR200W ANP1P32629 500 aa5.51□□□□□ -1.53
ROT1YMR200W BEM3P32873 1128 aa5.51□□□□□ -1.53
ROT1YMR200W CHS7P38843 316 aa5.51□□□□□ -1.53
ROT1YMR200W NPY1P53164 384 aa5.51□□□□□ -1.53
ROT1YMR200W GTR1Q00582 310 aa5.51□□□□□ -1.53
ROT1YMR200W YPR196WQ06595 470 aa5.51□□□□□ -1.53
ROT1YMR200W IMH1Q06704 911 aaKnown RBP5.51□□□□□ -1.53
ROT1YMR200W CLF1Q12309 687 aaPredicted RBP5.51□□□□□ -1.53
ROT1YMR200W RMP1Q12530 201 aa5.51□□□□□ -1.53
ROT1YMR200W PHR1P05066 565 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53not detected
ROT1YMR200W MSD1P15179 658 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 59 ms