RNA–Protein interactions for RNA: YLR447C

VMA6, Transcript of Subunit d of the V0 integral membrane domain of V-ATPase, yeast

Gene VMA6, Length 1,038 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA6	YLR447C	YNL162W-A	Q3E7A8	72 aa		5.05	□□□□□ -1.6
VMA6	YLR447C	CAN1	P04817	590 aa		5.04	□□□□□ -1.6
VMA6	YLR447C	SPC29	P33419	253 aa		5.04	□□□□□ -1.6
VMA6	YLR447C	CCT3	P39077	534 aa	Known RBP	5.04	□□□□□ -1.6
VMA6	YLR447C	PRP31	P49704	494 aa	Predicted RBP	5.04	□□□□□ -1.6
VMA6	YLR447C	TEX1	P53851	422 aa	Known RBP	5.04	□□□□□ -1.6
VMA6	YLR447C	APM1	Q00776	475 aa	Predicted RBP	5.04	□□□□□ -1.6
VMA6	YLR447C	GPR1	Q12361	961 aa		5.04	□□□□□ -1.6
VMA6	YLR447C	GAL11	P19659	1081 aa		5.03	□□□□□ -1.6
VMA6	YLR447C	SPO11	P23179	398 aa		5.03	□□□□□ -1.6
VMA6	YLR447C	HIR1	P32479	840 aa		5.03	□□□□□ -1.6
VMA6	YLR447C	RSP5	P39940	809 aa	Known RBP	5.03	□□□□□ -1.6
VMA6	YLR447C	NDC80	P40460	691 aa		5.03	□□□□□ -1.6
VMA6	YLR447C	CTR1	P49573	406 aa		5.03	□□□□□ -1.6
VMA6	YLR447C	HUL5	P53119	910 aa		5.03	□□□□□ -1.6
VMA6	YLR447C	ORC4	P54791	529 aa		5.03	□□□□□ -1.6
VMA6	YLR447C	YKL033W-A	Q86ZR7	236 aa		5.03	□□□□□ -1.6
VMA6	YLR447C	PER1	P25625	357 aa		5.02	□□□□□ -1.61
VMA6	YLR447C	APT2	P36973	181 aa		5.02	□□□□□ -1.61
VMA6	YLR447C	HOF1	Q05080	669 aa		5.02	□□□□□ -1.61
VMA6	YLR447C	ARO10	Q06408	635 aa		5.02	□□□□□ -1.61
VMA6	YLR447C	RPN13	O13563	156 aa		5.01	□□□□□ -1.61
VMA6	YLR447C	PYC1	P11154	1178 aa	Known RBP	5.01	□□□□□ -1.61
VMA6	YLR447C	ADY2	P25613	283 aa		5.01	□□□□□ -1.61
VMA6	YLR447C	GLG1	P36143	616 aa		5.01	□□□□□ -1.61
VMA6	YLR447C	ARG2	P40360	574 aa		5.01	□□□□□ -1.61
VMA6	YLR447C	HXT16	P47185	567 aa		5.01	□□□□□ -1.61
VMA6	YLR447C	MVD1	P32377	396 aa	Known RBP	5	□□□□□ -1.61
VMA6	YLR447C	TRZ1	P36159	838 aa	Predicted RBP	5	□□□□□ -1.61
VMA6	YLR447C	YFL052W	P43551	465 aa		5	□□□□□ -1.61
VMA6	YLR447C	RTA1	P53047	317 aa		5	□□□□□ -1.61
VMA6	YLR447C	TAF3	Q12297	353 aa		5	□□□□□ -1.61
VMA6	YLR447C	SIR3	P06701	978 aa		4.99	□□□□□ -1.61
VMA6	YLR447C	APL2	P36000	726 aa	Predicted RBP	4.99	□□□□□ -1.61
VMA6	YLR447C	PAN2	P53010	1115 aa	Predicted RBP	4.99	□□□□□ -1.61
VMA6	YLR447C	FLO10	P36170	1169 aa		4.98	□□□□□ -1.61
VMA6	YLR447C	SFB3	P38810	929 aa		4.98	□□□□□ -1.61
VMA6	YLR447C	NUP60	P39705	539 aa		4.98	□□□□□ -1.61
VMA6	YLR447C	MTL1	P53214	551 aa		4.98	□□□□□ -1.61
VMA6	YLR447C	AFT2	Q08957	416 aa		4.98	□□□□□ -1.61
VMA6	YLR447C	FMO1	P38866	432 aa		4.97	□□□□□ -1.61
VMA6	YLR447C	RPN10	P38886	268 aa	Known RBP	4.97	□□□□□ -1.61
VMA6	YLR447C	BDH2	P39713	417 aa		4.97	□□□□□ -1.61
VMA6	YLR447C	CDC53	Q12018	815 aa	Known RBP	4.97	□□□□□ -1.61
VMA6	YLR447C	MDM10	P18409	493 aa		4.96	□□□□□ -1.62
VMA6	YLR447C	ADE2	P21264	571 aa	Known RBP	4.96	□□□□□ -1.62
VMA6	YLR447C	CCR4	P31384	837 aa	Known RBP	4.96	□□□□□ -1.62
VMA6	YLR447C	YHR112C	P38716	378 aa		4.96	□□□□□ -1.62
VMA6	YLR447C	CCT7	P42943	550 aa	Known RBP	4.96	□□□□□ -1.62
VMA6	YLR447C	BNA2	P47125	453 aa		4.96	□□□□□ -1.62
VMA6	YLR447C	ATG4	P53867	494 aa		4.96	□□□□□ -1.62
VMA6	YLR447C	ARG5,6	Q01217	863 aa		4.96	□□□□□ -1.62
VMA6	YLR447C	THI7	Q05998	598 aa		4.96	□□□□□ -1.62
VMA6	YLR447C	MCM21	Q06675	368 aa		4.96	□□□□□ -1.62
VMA6	YLR447C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
VMA6	YLR447C	YEL020C	P39994	560 aa		4.95	□□□□□ -1.62
VMA6	YLR447C	TY4A-J	P47023	414 aa		4.95	□□□□□ -1.62
VMA6	YLR447C	UBC9	P50623	157 aa	Predicted RBP	4.95	□□□□□ -1.62
VMA6	YLR447C	NPY1	P53164	384 aa		4.95	□□□□□ -1.62
VMA6	YLR447C	YDR338C	Q05497	695 aa		4.95	□□□□□ -1.62
VMA6	YLR447C	CLF1	Q12309	687 aa	Predicted RBP	4.95	□□□□□ -1.62
VMA6	YLR447C	YOR131C	Q12486	218 aa		4.95	□□□□□ -1.62
VMA6	YLR447C	CHZ1	P40019	153 aa	Predicted RBP	4.94	□□□□□ -1.62
VMA6	YLR447C	EMP70	P32802	667 aa		4.93	□□□□□ -1.62
VMA6	YLR447C	STO1	P34160	861 aa	Known RBP	4.93	□□□□□ -1.62
VMA6	YLR447C	MTC2	P34246	357 aa		4.93	□□□□□ -1.62
VMA6	YLR447C	PHO11	P35842	467 aa		4.93	□□□□□ -1.62
VMA6	YLR447C	PHO12	P38693	467 aa		4.93	□□□□□ -1.62
VMA6	YLR447C	MIP6	P38760	659 aa	Known RBP	4.93	□□□□□ -1.62
VMA6	YLR447C	GDH3	P39708	457 aa		4.93	□□□□□ -1.62
VMA6	YLR447C	REC102	Q02721	264 aa		4.93	□□□□□ -1.62
VMA6	YLR447C	ZRT2	Q12436	422 aa		4.93	□□□□□ -1.62
VMA6	YLR447C	ORC2	P32833	620 aa		4.92	□□□□□ -1.62
VMA6	YLR447C	LYS9	P38999	446 aa		4.92	□□□□□ -1.62
VMA6	YLR447C	FHN1	P53279	174 aa		4.92	□□□□□ -1.62
VMA6	YLR447C	NSE3	Q05541	303 aa		4.92	□□□□□ -1.62
VMA6	YLR447C	MRI1	Q06489	411 aa	Known RBP	4.91	□□□□□ -1.62
VMA6	YLR447C	YLR149C	Q99296	730 aa		4.91	□□□□□ -1.62
VMA6	YLR447C	HRP1	Q99383	534 aa	Known RBP	4.91	□□□□□ -1.62
VMA6	YLR447C	MCD4	P36051	919 aa		4.9	□□□□□ -1.63
VMA6	YLR447C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
VMA6	YLR447C	NNF1	P47149	201 aa		4.9	□□□□□ -1.63
VMA6	YLR447C	DIA2	Q08496	732 aa	Predicted RBP	4.9	□□□□□ -1.63
VMA6	YLR447C	GSY1	P23337	708 aa		4.89	□□□□□ -1.63
VMA6	YLR447C	UBS1	P38290	277 aa		4.89	□□□□□ -1.63
VMA6	YLR447C	CRP1	P38845	465 aa	Known RBP	4.89	□□□□□ -1.63
VMA6	YLR447C	SNP1	Q00916	300 aa	Predicted RBP	4.89	□□□□□ -1.63
VMA6	YLR447C	SLK19	Q08581	821 aa	Known RBP	4.89	□□□□□ -1.63
VMA6	YLR447C	ICT1	Q12385	394 aa		4.89	□□□□□ -1.63
VMA6	YLR447C	Q0142	Q9ZZW4	58 aa		4.89	□□□□□ -1.63
VMA6	YLR447C	RNR1	P21524	888 aa	Known RBP	4.88	□□□□□ -1.63
VMA6	YLR447C	ERG6	P25087	383 aa	Known RBP	4.88	□□□□□ -1.63
VMA6	YLR447C	GMH1	P36125	273 aa		4.88	□□□□□ -1.63
VMA6	YLR447C	HSL7	P38274	827 aa		4.88	□□□□□ -1.63
VMA6	YLR447C	PAC2	P39937	518 aa		4.88	□□□□□ -1.63
VMA6	YLR447C	CAF16	P43569	289 aa		4.88	□□□□□ -1.63
VMA6	YLR447C	COX18	P53239	316 aa		4.88	□□□□□ -1.63
VMA6	YLR447C	RPN7	Q06103	429 aa	Known RBP	4.88	□□□□□ -1.63
VMA6	YLR447C	YAP7	Q08182	245 aa		4.88	□□□□□ -1.63
VMA6	YLR447C	MLH3	Q12083	715 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 43.1 ms