RNA–Protein interactions for RNA: YLR223C

IFH1, Transcript of Coactivator, regulates transcription of ribosomal protein (RP) genes, yeastyeast

Gene IFH1, Length 3,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IFH1YLR223C PEX6P33760 1030 aa1.94□□□□□ -2.1
IFH1YLR223C ATF1P40353 525 aa1.94□□□□□ -2.1
IFH1YLR223C BUD6P41697 788 aa1.94□□□□□ -2.1
IFH1YLR223C PRP31P49704 494 aaPredicted RBP1.94□□□□□ -2.1
IFH1YLR223C CTK1Q03957 528 aaKnown RBP1.94□□□□□ -2.1
IFH1YLR223C POB3Q04636 552 aaKnown RBP1.94□□□□□ -2.1
IFH1YLR223C ADY4Q05955 493 aa1.94□□□□□ -2.1
IFH1YLR223C TGL5Q12043 749 aa1.94□□□□□ -2.1
IFH1YLR223C CDC9P04819 755 aa1.93□□□□□ -2.1
IFH1YLR223C YBR259WP38338 688 aa1.93□□□□□ -2.1
IFH1YLR223C MNN1P39106 762 aa1.93□□□□□ -2.1
IFH1YLR223C CCR4P31384 837 aaKnown RBP1.93□□□□□ -2.1
IFH1YLR223C YJL163CP46996 555 aa1.93□□□□□ -2.1
IFH1YLR223C NTG2Q08214 380 aa1.93□□□□□ -2.1
IFH1YLR223C SGO1Q08490 590 aa1.93□□□□□ -2.1
IFH1YLR223C MEF1P25039 761 aa1.93□□□□□ -2.1
IFH1YLR223C MSH2P25847 964 aa1.93□□□□□ -2.1
IFH1YLR223C STO1P34160 861 aaKnown RBP1.93□□□□□ -2.1
IFH1YLR223C CUE2P36075 443 aaKnown RBP1.93□□□□□ -2.1
IFH1YLR223C TFB2Q02939 513 aa1.93□□□□□ -2.1
IFH1YLR223C TUB3P09734 445 aaKnown RBP1.92□□□□□ -2.1
IFH1YLR223C UBC9P50623 157 aaPredicted RBP1.92□□□□□ -2.1
IFH1YLR223C ZIP2P53061 704 aa1.92□□□□□ -2.1
IFH1YLR223C AIM44Q99299 758 aa1.92□□□□□ -2.1
IFH1YLR223C Q0142Q9ZZW4 58 aa1.92□□□□□ -2.1
IFH1YLR223C ADR1P07248 1323 aa1.92□□□□□ -2.1
IFH1YLR223C YKR075CP36155 307 aa1.92□□□□□ -2.1
IFH1YLR223C LAT1P12695 482 aaKnown RBP1.92□□□□□ -2.1
IFH1YLR223C RRP14P36080 434 aaKnown RBP1.92□□□□□ -2.1
IFH1YLR223C NMD2P38798 1089 aaKnown RBP1.92□□□□□ -2.1
IFH1YLR223C SFB3P38810 929 aa1.92□□□□□ -2.1
IFH1YLR223C YJL206CP39529 758 aa1.92□□□□□ -2.1
IFH1YLR223C SDS3P40505 327 aa1.92□□□□□ -2.1
IFH1YLR223C HLJ1P48353 224 aa1.92□□□□□ -2.1
IFH1YLR223C APM1Q00776 475 aaPredicted RBP1.92□□□□□ -2.1
IFH1YLR223C ATP25Q03153 612 aa1.92□□□□□ -2.1
IFH1YLR223C DIA2Q08496 732 aaPredicted RBP1.92□□□□□ -2.1
IFH1YLR223C ARG2P40360 574 aa1.91□□□□□ -2.1
IFH1YLR223C AIM14P53109 570 aa1.91□□□□□ -2.1
IFH1YLR223C SLU7Q02775 382 aaKnown RBP1.91□□□□□ -2.1
IFH1YLR223C ASM4Q05166 528 aa1.91□□□□□ -2.1
IFH1YLR223C PRP4P20053 465 aaKnown RBP1.91□□□□□ -2.1
IFH1YLR223C TRZ1P36159 838 aaPredicted RBP1.91□□□□□ -2.1
IFH1YLR223C NDC80P40460 691 aa1.91□□□□□ -2.1
IFH1YLR223C YAP1802P53309 568 aa1.91□□□□□ -2.1
IFH1YLR223C SDA1P53313 767 aaKnown RBP1.91□□□□□ -2.1
IFH1YLR223C ORC1P54784 914 aaPredicted RBP1.91□□□□□ -2.1
IFH1YLR223C RPN7Q06103 429 aaKnown RBP1.91□□□□□ -2.1
IFH1YLR223C YGR161W-CQ3E744 92 aa1.91□□□□□ -2.1
IFH1YLR223C RPA135P22138 1203 aaKnown RBP1.9□□□□□ -2.1
IFH1YLR223C YPT53P36019 220 aa1.9□□□□□ -2.1
IFH1YLR223C GLG1P36143 616 aa1.9□□□□□ -2.1
IFH1YLR223C BCD1P38772 366 aa1.9□□□□□ -2.1
IFH1YLR223C CTR1P49573 406 aa1.9□□□□□ -2.1
IFH1YLR223C TEL2P53038 688 aa1.9□□□□□ -2.1
IFH1YLR223C MAL11P53048 616 aa1.9□□□□□ -2.1
IFH1YLR223C MRPS35P53292 345 aa1.9□□□□□ -2.1
IFH1YLR223C UGO1Q03327 502 aa1.9□□□□□ -2.1
IFH1YLR223C SRD1P09007 221 aa1.9□□□□□ -2.11
IFH1YLR223C TUB1P09733 447 aaKnown RBP1.9□□□□□ -2.11
IFH1YLR223C BRN1P38170 754 aa1.9□□□□□ -2.11
IFH1YLR223C YIL166CP40445 542 aa1.9□□□□□ -2.11
IFH1YLR223C ATG36P46983 293 aa1.9□□□□□ -2.11
IFH1YLR223C TY4A-JP47023 414 aa1.9□□□□□ -2.11
IFH1YLR223C BUL1P48524 976 aa1.9□□□□□ -2.11
IFH1YLR223C DNM1P54861 757 aa1.9□□□□□ -2.11
IFH1YLR223C ATG11Q12527 1178 aa1.9□□□□□ -2.11
IFH1YLR223C YBR182C-AQ8TGU6 64 aa1.9□□□□□ -2.11
IFH1YLR223C FBP1P09201 348 aa1.9□□□□□ -2.11
IFH1YLR223C MTC2P34246 357 aa1.9□□□□□ -2.11
IFH1YLR223C MCD4P36051 919 aa1.9□□□□□ -2.11
IFH1YLR223C CCT3P39077 534 aaKnown RBP1.9□□□□□ -2.11
IFH1YLR223C QRI1P43123 477 aaKnown RBP1.9□□□□□ -2.11
IFH1YLR223C SNP1Q00916 300 aaPredicted RBP1.9□□□□□ -2.11
IFH1YLR223C NHX1Q04121 633 aa1.9□□□□□ -2.11
IFH1YLR223C MDM12Q92328 271 aa1.9□□□□□ -2.11
IFH1YLR223C NUP145P49687 1317 aa1.9□□□□□ -2.11
IFH1YLR223C YBR053CP38235 358 aa1.89□□□□□ -2.11
IFH1YLR223C FMP52P40008 231 aa1.89□□□□□ -2.11
IFH1YLR223C SPC98P53540 846 aa1.89□□□□□ -2.11
IFH1YLR223C YDR338CQ05497 695 aa1.89□□□□□ -2.11
IFH1YLR223C GUD1Q07729 489 aa1.89□□□□□ -2.11
IFH1YLR223C SLK19Q08581 821 aaKnown RBP1.89□□□□□ -2.11
IFH1YLR223C ZRT2Q12436 422 aa1.89□□□□□ -2.11
IFH1YLR223C NOP14Q99207 810 aaKnown RBP1.89□□□□□ -2.11
IFH1YLR223C RPS9BP05755 195 aaKnown RBP1.89□□□□□ -2.11
IFH1YLR223C HMG1P12683 1054 aa1.89□□□□□ -2.11
IFH1YLR223C ABF1P14164 731 aa1.89□□□□□ -2.11
IFH1YLR223C SFL1P20134 766 aa1.89□□□□□ -2.11
IFH1YLR223C VPS73P53142 486 aaKnown RBP1.89□□□□□ -2.11
IFH1YLR223C TEX1P53851 422 aaKnown RBP1.89□□□□□ -2.11
IFH1YLR223C YKL033W-AQ86ZR7 236 aa1.89□□□□□ -2.11
IFH1YLR223C KCC4P25389 1037 aa1.88□□□□□ -2.11
IFH1YLR223C HOG1P32485 435 aa1.88□□□□□ -2.11
IFH1YLR223C YKR051WP36142 418 aa1.88□□□□□ -2.11
IFH1YLR223C HSL7P38274 827 aa1.88□□□□□ -2.11
IFH1YLR223C SIC1P38634 284 aa1.88□□□□□ -2.11
IFH1YLR223C RIX1P38883 763 aaPredicted RBP1.88□□□□□ -2.11
IFH1YLR223C CAF16P43569 289 aa1.88□□□□□ -2.11
IFH1YLR223C MTL1P53214 551 aa1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms