RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CBF5	YLR175W	RTP1	Q12751	981 aa		4.94	□□□□□ -1.62
CBF5	YLR175W	SPT2	P06843	333 aa	Predicted RBP	4.94	□□□□□ -1.62
CBF5	YLR175W	SWI6	P09959	803 aa		4.94	□□□□□ -1.62
CBF5	YLR175W	ERC1	P38767	581 aa		4.94	□□□□□ -1.62
CBF5	YLR175W	NPP2	P39997	493 aa		4.94	□□□□□ -1.62
CBF5	YLR175W	CUL3	P53202	744 aa		4.94	□□□□□ -1.62
CBF5	YLR175W	ENV11	P53246	860 aa		4.94	□□□□□ -1.62
CBF5	YLR175W	ALF1	P53904	254 aa		4.94	□□□□□ -1.62
CBF5	YLR175W	YLR287C	Q05881	355 aa		4.94	□□□□□ -1.62
CBF5	YLR175W	YLR297W	Q05899	129 aa		4.94	□□□□□ -1.62
CBF5	YLR175W	YOR131C	Q12486	218 aa		4.94	□□□□□ -1.62
CBF5	YLR175W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	RIP-Chip
CBF5	YLR175W	CHS2	P14180	963 aa		4.93	□□□□□ -1.62
CBF5	YLR175W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
CBF5	YLR175W	MSS51	P32335	436 aa		4.93	□□□□□ -1.62
CBF5	YLR175W	PAH1	P32567	862 aa		4.93	□□□□□ -1.62
CBF5	YLR175W	MUD1	P32605	298 aa	Known RBP	4.93	□□□□□ -1.62
CBF5	YLR175W	RRN6	P32786	894 aa		4.93	□□□□□ -1.62
CBF5	YLR175W	MRT4	P33201	236 aa	Known RBP	4.93	□□□□□ -1.62
CBF5	YLR175W	BUD2	P33314	1104 aa		4.93	□□□□□ -1.62
CBF5	YLR175W	RPC25	P35718	212 aa		4.93	□□□□□ -1.62
CBF5	YLR175W	MRX3	P38172	270 aa		4.93	□□□□□ -1.62
CBF5	YLR175W	RGA1	P39083	1007 aa		4.93	□□□□□ -1.62
CBF5	YLR175W	MDJ2	P42834	146 aa		4.93	□□□□□ -1.62
CBF5	YLR175W	ACF4	P47129	309 aa		4.93	□□□□□ -1.62
CBF5	YLR175W	VPS62	P53285	467 aa		4.93	□□□□□ -1.62
CBF5	YLR175W	TIM8	P57744	87 aa		4.93	□□□□□ -1.62
CBF5	YLR175W	YCG1	Q06680	1035 aa		4.93	□□□□□ -1.62
CBF5	YLR175W	CSR1	Q06705	408 aa	Known RBP	4.93	□□□□□ -1.62
CBF5	YLR175W	MLH2	Q07980	695 aa		4.93	□□□□□ -1.62
CBF5	YLR175W	MOT1	P32333	1867 aa		4.93	□□□□□ -1.62
CBF5	YLR175W	CYT1	P07143	309 aa		4.92	□□□□□ -1.62
CBF5	YLR175W	SWI5	P08153	709 aa		4.92	□□□□□ -1.62
CBF5	YLR175W	HEM1	P09950	548 aa	Predicted RBP	4.92	□□□□□ -1.62
CBF5	YLR175W	WHI2	P12611	486 aa		4.92	□□□□□ -1.62
CBF5	YLR175W	NAT1	P12945	854 aa	Known RBP	4.92	□□□□□ -1.62
CBF5	YLR175W	UTR2	P32623	467 aa		4.92	□□□□□ -1.62
CBF5	YLR175W	SKG6	P32900	734 aa	Predicted RBP	4.92	□□□□□ -1.62
CBF5	YLR175W	DUR3	P33413	735 aa		4.92	□□□□□ -1.62
CBF5	YLR175W	MKS1	P34072	584 aa		4.92	□□□□□ -1.62
CBF5	YLR175W	YKL023W	P36103	277 aa	Known RBP	4.92	□□□□□ -1.62
CBF5	YLR175W	GRS1	P38088	690 aa	Known RBP	4.92	□□□□□ -1.62
CBF5	YLR175W	RTT107	P38850	1070 aa		4.92	□□□□□ -1.62
CBF5	YLR175W	YAP1801	P38856	637 aa		4.92	□□□□□ -1.62
CBF5	YLR175W	SMC2	P38989	1170 aa	Known RBP	4.92	□□□□□ -1.62
CBF5	YLR175W	BOL3	P39724	118 aa		4.92	□□□□□ -1.62
CBF5	YLR175W	ALD5	P40047	520 aa	Known RBP	4.92	□□□□□ -1.62
CBF5	YLR175W	STU2	P46675	888 aa		4.92	□□□□□ -1.62
CBF5	YLR175W	SMC3	P47037	1230 aa		4.92	□□□□□ -1.62
CBF5	YLR175W	ASN1	P49089	572 aa	Known RBP	4.92	□□□□□ -1.62
CBF5	YLR175W	ORC5	P50874	479 aa		4.92	□□□□□ -1.62
CBF5	YLR175W	MNP1	P53163	194 aa	Predicted RBP	4.92	□□□□□ -1.62
CBF5	YLR175W	ESBP6	P53918	673 aa		4.92	□□□□□ -1.62
CBF5	YLR175W	ERG5	P54781	538 aa		4.92	□□□□□ -1.62
CBF5	YLR175W	ATG9	Q12142	997 aa		4.92	□□□□□ -1.62
CBF5	YLR175W	RRP6	Q12149	733 aa	Known RBP	4.92	□□□□□ -1.62
CBF5	YLR175W	RIF1	P29539	1916 aa		4.92	□□□□□ -1.62
CBF5	YLR175W	RPP2B	P02400	110 aa	Known RBP	4.91	□□□□□ -1.62
CBF5	YLR175W	PPR1	P07272	904 aa	Predicted RBP	4.91	□□□□□ -1.62
CBF5	YLR175W	DAT1	P13483	248 aa	Known RBP	4.91	□□□□□ -1.62
CBF5	YLR175W	SEC23	P15303	768 aa	Known RBP	4.91	□□□□□ -1.62
CBF5	YLR175W	KIP1	P28742	1111 aa		4.91	□□□□□ -1.62
CBF5	YLR175W	LDH1	P38139	375 aa		4.91	□□□□□ -1.62
CBF5	YLR175W	MMS4	P38257	691 aa		4.91	□□□□□ -1.62
CBF5	YLR175W	YHR219W	P38900	624 aa		4.91	□□□□□ -1.62
CBF5	YLR175W	FTR1	P40088	404 aa		4.91	□□□□□ -1.62
CBF5	YLR175W	HSH155	P49955	971 aa	Known RBP	4.91	□□□□□ -1.62
CBF5	YLR175W	RPA49	Q01080	415 aa	Predicted RBP	4.91	□□□□□ -1.62
CBF5	YLR175W	FMP30	Q02883	468 aa		4.91	□□□□□ -1.62
CBF5	YLR175W	UME1	Q03010	460 aa		4.91	□□□□□ -1.62
CBF5	YLR175W	TRS130	Q03660	1102 aa		4.91	□□□□□ -1.62
CBF5	YLR175W	UTP5	Q04177	643 aa	Known RBP	4.91	□□□□□ -1.62
CBF5	YLR175W	UTP14	Q04500	899 aa	Known RBP	4.91	□□□□□ -1.62
CBF5	YLR175W	VPS38	Q05919	439 aa		4.91	□□□□□ -1.62
CBF5	YLR175W	YPR078C	Q06813	372 aa		4.91	□□□□□ -1.62
CBF5	YLR175W	APL4	Q12028	832 aa		4.91	□□□□□ -1.62
CBF5	YLR175W	GIS3	Q12418	502 aa		4.91	□□□□□ -1.62
CBF5	YLR175W	STE6	P12866	1290 aa		4.9	□□□□□ -1.62
CBF5	YLR175W	TUP1	P16649	713 aa		4.9	□□□□□ -1.62
CBF5	YLR175W	SPO12	P17123	173 aa		4.9	□□□□□ -1.62
CBF5	YLR175W	RPT1	P33299	467 aa	Known RBP	4.9	□□□□□ -1.62
CBF5	YLR175W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.62	not detected
CBF5	YLR175W	UIP5	P36137	443 aa		4.9	□□□□□ -1.62
CBF5	YLR175W	TBS1	P38114	1094 aa		4.9	□□□□□ -1.62
CBF5	YLR175W	VID24	P38263	362 aa		4.9	□□□□□ -1.62
CBF5	YLR175W	CCC2	P38995	1004 aa		4.9	□□□□□ -1.62
CBF5	YLR175W	SHQ1	P40486	507 aa	Predicted RBP	4.9	□□□□□ -1.62
CBF5	YLR175W	HXT8	P40886	569 aa		4.9	□□□□□ -1.62
CBF5	YLR175W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.62	RIP-Chip
CBF5	YLR175W	DAS1	P47005	663 aa		4.9	□□□□□ -1.62
CBF5	YLR175W	AZR1	P50080	613 aa		4.9	□□□□□ -1.62
CBF5	YLR175W	YGR130C	P53278	816 aa		4.9	□□□□□ -1.62
CBF5	YLR175W	ESC2	Q06340	456 aa		4.9	□□□□□ -1.62
CBF5	YLR175W	ECM30	Q06673	1274 aa		4.9	□□□□□ -1.62
CBF5	YLR175W	TSR1	Q07381	788 aa	Known RBP	4.9	□□□□□ -1.62
CBF5	YLR175W	SGT2	Q12118	346 aa	Known RBP	4.9	□□□□□ -1.62
CBF5	YLR175W	LSO1	Q3E827	93 aa		4.9	□□□□□ -1.62
CBF5	YLR175W	COX4	P04037	155 aa		4.89	□□□□□ -1.63
CBF5	YLR175W	GLN3	P18494	730 aa		4.89	□□□□□ -1.63
CBF5	YLR175W	ADE2	P21264	571 aa	Known RBP	4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms