RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W SAH1P39954 449 aaKnown RBP10.69□□□□□ -0.7
SHH4YLR164W SMC3P47037 1230 aa10.69□□□□□ -0.7
SHH4YLR164W DRN1P53255 507 aaKnown RBP10.69□□□□□ -0.7
SHH4YLR164W YNL134CP53912 376 aaKnown RBP10.69□□□□□ -0.7
SHH4YLR164W CWC21Q03375 135 aaKnown RBP10.69□□□□□ -0.7
SHH4YLR164W OSH2Q12451 1283 aa10.69□□□□□ -0.7
SHH4YLR164W RRN6P32786 894 aa10.68□□□□□ -0.7
SHH4YLR164W YGR021WP53212 290 aa10.68□□□□□ -0.7
SHH4YLR164W EEB1Q02891 456 aa10.68□□□□□ -0.7
SHH4YLR164W YPL034WQ03083 165 aa10.68□□□□□ -0.7
SHH4YLR164W YDR222WQ04925 415 aa10.68□□□□□ -0.7
SHH4YLR164W TSR1Q07381 788 aaKnown RBP10.68□□□□□ -0.7
SHH4YLR164W LDB19Q12502 818 aa10.68□□□□□ -0.7
SHH4YLR164W CTF3Q12748 733 aa10.68□□□□□ -0.7
SHH4YLR164W GAL10P04397 699 aa10.67□□□□□ -0.7
SHH4YLR164W CHS1P08004 1131 aa10.67□□□□□ -0.7
SHH4YLR164W HEM1P09950 548 aaPredicted RBP10.67□□□□□ -0.7
SHH4YLR164W RSA4P25382 515 aaKnown RBP10.67□□□□□ -0.7
SHH4YLR164W CSE2P33308 149 aa10.67□□□□□ -0.7
SHH4YLR164W SMF1P38925 575 aa10.67□□□□□ -0.7
SHH4YLR164W ASG7P46993 209 aa10.67□□□□□ -0.7
SHH4YLR164W ALT1P52893 592 aa10.67□□□□□ -0.7
SHH4YLR164W PUS2P53167 370 aa10.67□□□□□ -0.7
SHH4YLR164W BTN2P53286 410 aa10.67□□□□□ -0.7
SHH4YLR164W PUS1Q12211 544 aaKnown RBP10.67□□□□□ -0.7
SHH4YLR164W LAA1P39526 2014 aa10.67□□□□□ -0.7
SHH4YLR164W SNF1P06782 633 aaKnown RBP10.66□□□□□ -0.7
SHH4YLR164W GFA1P14742 717 aaKnown RBP10.66□□□□□ -0.7
SHH4YLR164W GYP6P32806 458 aa10.66□□□□□ -0.7
SHH4YLR164W NCL1P38205 684 aaKnown RBP10.66□□□□□ -0.7
SHH4YLR164W YMR1P47147 688 aaKnown RBP RIP-Chip data10.66□□□□□ -0.7not detected
SHH4YLR164W ISM1P48526 1002 aa10.66□□□□□ -0.7
SHH4YLR164W HOS3Q02959 697 aaKnown RBP10.66□□□□□ -0.7
SHH4YLR164W GYL1Q04322 720 aa10.66□□□□□ -0.7
SHH4YLR164W YPR027CQ12079 277 aa10.66□□□□□ -0.7
SHH4YLR164W VPS13Q07878 3144 aa10.66□□□□□ -0.7
SHH4YLR164W BI2P03873 423 aa10.65□□□□□ -0.7
SHH4YLR164W BI4P03879 638 aa10.65□□□□□ -0.7
SHH4YLR164W CKI1P20485 582 aa10.65□□□□□ -0.7
SHH4YLR164W SDH2P21801 266 aa10.65□□□□□ -0.7
SHH4YLR164W FUB1P25659 250 aa10.65□□□□□ -0.7
SHH4YLR164W CBR1P38626 284 aaKnown RBP10.65□□□□□ -0.7
SHH4YLR164W YEL075CP39972 122 aa10.65□□□□□ -0.7
SHH4YLR164W YTA12P40341 825 aa10.65□□□□□ -0.7
SHH4YLR164W NDC80P40460 691 aa10.65□□□□□ -0.7
SHH4YLR164W SYH1Q02875 849 aaKnown RBP10.65□□□□□ -0.7
SHH4YLR164W YLR455WQ06188 304 aa10.65□□□□□ -0.7
SHH4YLR164W BI3Q9ZZW7 517 aa10.65□□□□□ -0.7
SHH4YLR164W SEC21P32074 935 aaKnown RBP10.64□□□□□ -0.71
SHH4YLR164W SRB4P32569 687 aa10.64□□□□□ -0.71
SHH4YLR164W HEL1P36113 551 aa10.64□□□□□ -0.71
SHH4YLR164W GRS1P38088 690 aaKnown RBP10.64□□□□□ -0.71
SHH4YLR164W REI1P38344 393 aaPredicted RBP10.64□□□□□ -0.71
SHH4YLR164W BRL1P38770 471 aa10.64□□□□□ -0.71
SHH4YLR164W BRO1P48582 844 aa10.64□□□□□ -0.71
SHH4YLR164W KAP114P53067 1004 aa10.64□□□□□ -0.71
SHH4YLR164W YMR114CQ04471 368 aaKnown RBP10.64□□□□□ -0.71
SHH4YLR164W MAG2Q06436 670 aaKnown RBP10.64□□□□□ -0.71
SHH4YLR164W RPS3P05750 240 aaKnown RBP10.63□□□□□ -0.71
SHH4YLR164W CIT2P08679 460 aa10.63□□□□□ -0.71
SHH4YLR164W STE11P23561 717 aa10.63□□□□□ -0.71
SHH4YLR164W BUD16P39988 312 aa10.63□□□□□ -0.71
SHH4YLR164W ASG1P40467 964 aa10.63□□□□□ -0.71
SHH4YLR164W YGL036WP53185 909 aaPredicted RBP10.63□□□□□ -0.71
SHH4YLR164W YGR035CP53222 116 aa10.63□□□□□ -0.71
SHH4YLR164W YMR018WQ04364 514 aa10.63□□□□□ -0.71
SHH4YLR164W DNL4Q08387 944 aaPredicted RBP10.63□□□□□ -0.71
SHH4YLR164W PET111P08468 800 aa10.62□□□□□ -0.71
SHH4YLR164W SAT4P25333 603 aaKnown RBP10.62□□□□□ -0.71
SHH4YLR164W BLI1P35727 113 aa10.62□□□□□ -0.71
SHH4YLR164W SLX1P38324 304 aa10.62□□□□□ -0.71
SHH4YLR164W KAP123P40069 1113 aaKnown RBP10.62□□□□□ -0.71
SHH4YLR164W CEP3P40969 608 aa10.62□□□□□ -0.71
SHH4YLR164W FOL2P51601 243 aaKnown RBP10.62□□□□□ -0.71
SHH4YLR164W YGR111WP53265 400 aa10.62□□□□□ -0.71
SHH4YLR164W GPD1Q00055 391 aaKnown RBP10.62□□□□□ -0.71
SHH4YLR164W KAR3P17119 729 aa10.61□□□□□ -0.71
SHH4YLR164W EST1P17214 699 aaPredicted RBP10.61□□□□□ -0.71
SHH4YLR164W VBA3P25594 458 aa10.61□□□□□ -0.71
SHH4YLR164W CYS3P31373 394 aaKnown RBP10.61□□□□□ -0.71
SHH4YLR164W EFB1P32471 206 aaKnown RBP10.61□□□□□ -0.71
SHH4YLR164W VBA5P36172 582 aa10.61□□□□□ -0.71
SHH4YLR164W TBS1P38114 1094 aa10.61□□□□□ -0.71
SHH4YLR164W POA1P38218 177 aa10.61□□□□□ -0.71
SHH4YLR164W HIS2P38635 335 aa10.61□□□□□ -0.71
SHH4YLR164W SPP1Q03012 353 aa10.61□□□□□ -0.71
SHH4YLR164W RRB1Q04225 511 aaKnown RBP10.61□□□□□ -0.71
SHH4YLR164W POB3Q04636 552 aaKnown RBP10.61□□□□□ -0.71
SHH4YLR164W YOR059CQ08448 450 aaKnown RBP10.61□□□□□ -0.71
SHH4YLR164W HIP1P06775 603 aa10.6□□□□□ -0.71
SHH4YLR164W YER152CP10356 443 aa10.6□□□□□ -0.71
SHH4YLR164W VMA4P22203 233 aaKnown RBP10.6□□□□□ -0.71
SHH4YLR164W DPB3P27344 201 aa10.6□□□□□ -0.71
SHH4YLR164W CAP1P28495 268 aaKnown RBP10.6□□□□□ -0.71
SHH4YLR164W MRP4P32902 394 aa10.6□□□□□ -0.71
SHH4YLR164W RRT2P38332 387 aa10.6□□□□□ -0.71
SHH4YLR164W RCK2P38623 610 aa10.6□□□□□ -0.71
SHH4YLR164W QNS1P38795 714 aaKnown RBP10.6□□□□□ -0.71
SHH4YLR164W FIR1P40020 876 aa10.6□□□□□ -0.71
SHH4YLR164W ESL1P40456 1118 aa10.6□□□□□ -0.71
Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms