RNA–Protein interactions for RNA: YKL197C

PEX1, Transcript of AAA-peroxin, yeast

Gene PEX1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX1	YKL197C	MDR1	P53258	950 aa		3.65	□□□□□ -1.83
PEX1	YKL197C	LSB1	P53281	241 aa		3.65	□□□□□ -1.83
PEX1	YKL197C	LSC1	P53598	329 aa	Known RBP	3.65	□□□□□ -1.83
PEX1	YKL197C	SPO20	Q04359	397 aa		3.65	□□□□□ -1.83
PEX1	YKL197C	SML1	Q04964	104 aa		3.65	□□□□□ -1.83
PEX1	YKL197C	TLG2	Q08144	397 aa		3.65	□□□□□ -1.83
PEX1	YKL197C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	3.65	□□□□□ -1.83	not detected
PEX1	YKL197C	CDC37	P06101	506 aa	Known RBP	3.64	□□□□□ -1.83
PEX1	YKL197C	DAT1	P13483	248 aa	Known RBP	3.64	□□□□□ -1.83
PEX1	YKL197C	NCP1	P16603	691 aa	Known RBP	3.64	□□□□□ -1.83
PEX1	YKL197C	HSP60	P19882	572 aa	Known RBP	3.64	□□□□□ -1.83
PEX1	YKL197C	VPS3	P23643	1011 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	LYP1	P32487	611 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	STE13	P33894	931 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	RSM22	P36056	628 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	MNN1	P39106	762 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	STU2	P46675	888 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	PEX14	P53112	341 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	TGL2	P54857	326 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	ERO1	Q03103	563 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	MCP2	Q06567	569 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	ACF2	Q12168	779 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	ADF1	Q2V2Q1	113 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	SWI1	P09547	1314 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	SSM4	P40318	1319 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	3.64	□□□□□ -1.83	not detected
PEX1	YKL197C	UIP5	P36137	443 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	RIM11	P38615	370 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	CBR1	P38626	284 aa	Known RBP	3.64	□□□□□ -1.83
PEX1	YKL197C	DED81	P38707	554 aa	Known RBP	3.64	□□□□□ -1.83
PEX1	YKL197C	SAK1	P38990	1142 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	YER137C	P40083	148 aa	Known RBP	3.64	□□□□□ -1.83
PEX1	YKL197C	PKP1	P40530	394 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	SAP185	P40856	1058 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	SCW11	P53189	542 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	RSC3	Q06639	885 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	VAM6	Q07468	1049 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	SRN2	Q99176	213 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	INH1	P01097	85 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	SSC1	P0CS90	654 aa	Known RBP	3.64	□□□□□ -1.83
PEX1	YKL197C	PDC6	P26263	563 aa	Known RBP	3.64	□□□□□ -1.83
PEX1	YKL197C	GAR1	P28007	205 aa	Known RBP	3.64	□□□□□ -1.83
PEX1	YKL197C	ICL1	P28240	557 aa	Predicted RBP	3.64	□□□□□ -1.83
PEX1	YKL197C	IRE1	P32361	1115 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	SRB4	P32569	687 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	VPS51	P36116	164 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	3.64	□□□□□ -1.83	not detected
PEX1	YKL197C	ALG3	P38179	458 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	YAP3	P38749	330 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	PIH1	P38768	344 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	RTT107	P38850	1070 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	YHR219W	P38900	624 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	ZRG8	P40021	1076 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	MET12	P46151	657 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	LYS4	P49367	693 aa	Predicted RBP	3.64	□□□□□ -1.83
PEX1	YKL197C	YGL242C	P53066	181 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	YGR266W	P53326	701 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	NCS2	P53923	493 aa	Predicted RBP	3.64	□□□□□ -1.83
PEX1	YKL197C	TAF12	Q03761	539 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	DCS1	Q06151	350 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	MED4	Q12343	284 aa		3.64	□□□□□ -1.83
PEX1	YKL197C	CYT1	P07143	309 aa		3.63	□□□□□ -1.83
PEX1	YKL197C	PRP6	P19735	899 aa	Predicted RBP	3.63	□□□□□ -1.83
PEX1	YKL197C	HCA4	P20448	770 aa	Known RBP	3.63	□□□□□ -1.83
PEX1	YKL197C	MCM2	P29469	868 aa		3.63	□□□□□ -1.83
PEX1	YKL197C	YKT6	P36015	200 aa	Known RBP	3.63	□□□□□ -1.83
PEX1	YKL197C	SWC5	P38326	303 aa		3.63	□□□□□ -1.83
PEX1	YKL197C	YHR131C	P38835	850 aa		3.63	□□□□□ -1.83
PEX1	YKL197C	YHB1	P39676	399 aa	Known RBP	3.63	□□□□□ -1.83
PEX1	YKL197C	PHB1	P40961	287 aa		3.63	□□□□□ -1.83
PEX1	YKL197C	MPS2	P53159	387 aa		3.63	□□□□□ -1.83
PEX1	YKL197C	RPM2	Q02773	1202 aa		3.63	□□□□□ -1.83
PEX1	YKL197C	NSE5	Q03718	556 aa		3.63	□□□□□ -1.83
PEX1	YKL197C	CRN1	Q06440	651 aa		3.63	□□□□□ -1.83
PEX1	YKL197C	ABP140	Q08641	628 aa	Known RBP	3.63	□□□□□ -1.83
PEX1	YKL197C	CHS5	Q12114	671 aa	Known RBP	3.63	□□□□□ -1.83
PEX1	YKL197C	LSO2	Q3E772	92 aa	Known RBP	3.63	□□□□□ -1.83
PEX1	YKL197C	BCK1	Q01389	1478 aa		3.63	□□□□□ -1.83
PEX1	YKL197C	RPC40	P07703	335 aa	Known RBP	3.63	□□□□□ -1.83
PEX1	YKL197C	ADH4	P10127	382 aa		3.63	□□□□□ -1.83
PEX1	YKL197C	MCM3	P24279	971 aa	Known RBP	3.63	□□□□□ -1.83
PEX1	YKL197C	MLF3	P32047	452 aa		3.63	□□□□□ -1.83
PEX1	YKL197C	SRP40	P32583	406 aa	Predicted RBP	3.63	□□□□□ -1.83
PEX1	YKL197C	YKL091C	P33324	310 aa	Known RBP	3.63	□□□□□ -1.83
PEX1	YKL197C	PSY4	P38193	441 aa		3.63	□□□□□ -1.83
PEX1	YKL197C	UBX7	P38349	436 aa		3.63	□□□□□ -1.83
PEX1	YKL197C	NUP84	P52891	726 aa		3.63	□□□□□ -1.83
PEX1	YKL197C	PDR11	P40550	1411 aa		3.62	□□□□□ -1.83
PEX1	YKL197C	ADE8	P04161	214 aa		3.62	□□□□□ -1.83
PEX1	YKL197C	MIH1	P23748	554 aa		3.62	□□□□□ -1.83
PEX1	YKL197C	VMA8	P32610	256 aa	Known RBP	3.62	□□□□□ -1.83
PEX1	YKL197C	MRP8	P35719	219 aa		3.62	□□□□□ -1.83
PEX1	YKL197C	HUL4	P40985	892 aa		3.62	□□□□□ -1.83
PEX1	YKL197C	URB2	P47108	1174 aa		3.62	□□□□□ -1.83
PEX1	YKL197C	YJR107W	P47145	328 aa		3.62	□□□□□ -1.83
PEX1	YKL197C	BSC5	P53755	489 aa		3.62	□□□□□ -1.83
PEX1	YKL197C	CUZ1	P53899	274 aa		3.62	□□□□□ -1.83
PEX1	YKL197C	GIM3	P53900	129 aa		3.62	□□□□□ -1.83
PEX1	YKL197C	YPL109C	Q02981	657 aa		3.62	□□□□□ -1.83
PEX1	YKL197C	IVY1	Q04934	453 aa		3.62	□□□□□ -1.83

Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms