RNA–Protein interactions for RNA: YKL123W

YKL123W, Transcript of Dubious open reading frame, yeast

Gene YKL123W, Length 381 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKL123W	YKL123W	MDM12	Q92328	271 aa		4.95	□□□□□ -1.62
YKL123W	YKL123W	YLR149C	Q99296	730 aa		4.95	□□□□□ -1.62
YKL123W	YKL123W	HIR1	P32479	840 aa		4.94	□□□□□ -1.62
YKL123W	YKL123W	STO1	P34160	861 aa	Known RBP	4.94	□□□□□ -1.62
YKL123W	YKL123W	BUD6	P41697	788 aa		4.94	□□□□□ -1.62
YKL123W	YKL123W	BNA2	P47125	453 aa		4.94	□□□□□ -1.62
YKL123W	YKL123W	YBP2	P53169	641 aa		4.94	□□□□□ -1.62
YKL123W	YKL123W	SIR3	P06701	978 aa		4.93	□□□□□ -1.62
YKL123W	YKL123W	APL2	P36000	726 aa	Predicted RBP	4.93	□□□□□ -1.62
YKL123W	YKL123W	CCT3	P39077	534 aa	Known RBP	4.93	□□□□□ -1.62
YKL123W	YKL123W	YML122C	Q03207	126 aa		4.93	□□□□□ -1.62
YKL123W	YKL123W	CDC9	P04819	755 aa		4.92	□□□□□ -1.62
YKL123W	YKL123W	ADE2	P21264	571 aa	Known RBP	4.92	□□□□□ -1.62
YKL123W	YKL123W	MEF1	P25039	761 aa		4.92	□□□□□ -1.62
YKL123W	YKL123W	CAF16	P43569	289 aa		4.92	□□□□□ -1.62
YKL123W	YKL123W	SSL2	Q00578	843 aa		4.92	□□□□□ -1.62
YKL123W	YKL123W	SNP1	Q00916	300 aa	Predicted RBP	4.92	□□□□□ -1.62
YKL123W	YKL123W	SUT2	Q12286	268 aa		4.92	□□□□□ -1.62
YKL123W	YKL123W	GFA1	P14742	717 aa	Known RBP	4.91	□□□□□ -1.62
YKL123W	YKL123W	MIH1	P23748	554 aa		4.91	□□□□□ -1.62
YKL123W	YKL123W	TDP1	P38319	544 aa		4.91	□□□□□ -1.62
YKL123W	YKL123W	YHR112C	P38716	378 aa		4.91	□□□□□ -1.62
YKL123W	YKL123W	RPN10	P38886	268 aa	Known RBP	4.91	□□□□□ -1.62
YKL123W	YKL123W	NUP82	P40368	713 aa		4.91	□□□□□ -1.62
YKL123W	YKL123W	YFL052W	P43551	465 aa		4.91	□□□□□ -1.62
YKL123W	YKL123W	YAP1802	P53309	568 aa		4.91	□□□□□ -1.62
YKL123W	YKL123W	SMX3	P54999	86 aa	Predicted RBP	4.91	□□□□□ -1.62
YKL123W	YKL123W	ARG5,6	Q01217	863 aa		4.91	□□□□□ -1.62
YKL123W	YKL123W	MCM21	Q06675	368 aa		4.91	□□□□□ -1.62
YKL123W	YKL123W	YLR125W	Q12138	136 aa		4.91	□□□□□ -1.62
YKL123W	YKL123W	Q0142	Q9ZZW4	58 aa		4.91	□□□□□ -1.62
YKL123W	YKL123W	GSY1	P23337	708 aa		4.9	□□□□□ -1.63
YKL123W	YKL123W	CUE2	P36075	443 aa	Known RBP	4.9	□□□□□ -1.63
YKL123W	YKL123W	MIP6	P38760	659 aa	Known RBP	4.9	□□□□□ -1.63
YKL123W	YKL123W	FMO1	P38866	432 aa		4.9	□□□□□ -1.63
YKL123W	YKL123W	LYS9	P38999	446 aa		4.9	□□□□□ -1.63
YKL123W	YKL123W	VPS73	P53142	486 aa	Known RBP	4.9	□□□□□ -1.63
YKL123W	YKL123W	MTL1	P53214	551 aa		4.9	□□□□□ -1.63
YKL123W	YKL123W	ORC4	P54791	529 aa		4.9	□□□□□ -1.63
YKL123W	YKL123W	CDC43	P18898	376 aa		4.89	□□□□□ -1.63
YKL123W	YKL123W	KIN3	P22209	435 aa		4.89	□□□□□ -1.63
YKL123W	YKL123W	YKR051W	P36142	418 aa		4.89	□□□□□ -1.63
YKL123W	YKL123W	TRZ1	P36159	838 aa	Predicted RBP	4.89	□□□□□ -1.63
YKL123W	YKL123W	APT2	P36973	181 aa		4.89	□□□□□ -1.63
YKL123W	YKL123W	CBR1	P38626	284 aa	Known RBP	4.89	□□□□□ -1.63
YKL123W	YKL123W	REV7	P38927	245 aa		4.89	□□□□□ -1.63
YKL123W	YKL123W	DSS1	P39112	969 aa		4.89	□□□□□ -1.63
YKL123W	YKL123W	TAH11	P47112	604 aa		4.89	□□□□□ -1.63
YKL123W	YKL123W	NPY1	P53164	384 aa		4.89	□□□□□ -1.63
YKL123W	YKL123W	CTK1	Q03957	528 aa	Known RBP	4.89	□□□□□ -1.63
YKL123W	YKL123W	YKL033W-A	Q86ZR7	236 aa		4.89	□□□□□ -1.63
YKL123W	YKL123W	PYC1	P11154	1178 aa	Known RBP	4.88	□□□□□ -1.63
YKL123W	YKL123W	PHO8	P11491	566 aa		4.88	□□□□□ -1.63
YKL123W	YKL123W	VBA3	P25594	458 aa		4.88	□□□□□ -1.63
YKL123W	YKL123W	PAN2	P53010	1115 aa	Predicted RBP	4.88	□□□□□ -1.63
YKL123W	YKL123W	HMO1	Q03973	246 aa	Known RBP	4.88	□□□□□ -1.63
YKL123W	YKL123W	HRP1	Q99383	534 aa	Known RBP	4.88	□□□□□ -1.63
YKL123W	YKL123W	SRD1	P09007	221 aa		4.87	□□□□□ -1.63
YKL123W	YKL123W	HCA4	P20448	770 aa	Known RBP	4.87	□□□□□ -1.63
YKL123W	YKL123W	MSH2	P25847	964 aa		4.87	□□□□□ -1.63
YKL123W	YKL123W	MVD1	P32377	396 aa	Known RBP	4.87	□□□□□ -1.63
YKL123W	YKL123W	HOG1	P32485	435 aa		4.87	□□□□□ -1.63
YKL123W	YKL123W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
YKL123W	YKL123W	NUP60	P39705	539 aa		4.87	□□□□□ -1.63
YKL123W	YKL123W	NHX1	Q04121	633 aa		4.87	□□□□□ -1.63
YKL123W	YKL123W	TAF3	Q12297	353 aa		4.87	□□□□□ -1.63
YKL123W	YKL123W	ERG6	P25087	383 aa	Known RBP	4.86	□□□□□ -1.63
YKL123W	YKL123W	YKR018C	P36114	725 aa		4.86	□□□□□ -1.63
YKL123W	YKL123W	HSL7	P38274	827 aa		4.86	□□□□□ -1.63
YKL123W	YKL123W	SFB3	P38810	929 aa		4.86	□□□□□ -1.63
YKL123W	YKL123W	YJL206C	P39529	758 aa		4.86	□□□□□ -1.63
YKL123W	YKL123W	GID8	P40208	455 aa		4.86	□□□□□ -1.63
YKL123W	YKL123W	NDC80	P40460	691 aa		4.86	□□□□□ -1.63
YKL123W	YKL123W	CCT7	P42943	550 aa	Known RBP	4.86	□□□□□ -1.63
YKL123W	YKL123W	PCL10	P53124	433 aa		4.86	□□□□□ -1.63
YKL123W	YKL123W	FHN1	P53279	174 aa		4.86	□□□□□ -1.63
YKL123W	YKL123W	LGE1	Q02796	332 aa	Known RBP	4.86	□□□□□ -1.63
YKL123W	YKL123W	RPN7	Q06103	429 aa	Known RBP	4.86	□□□□□ -1.63
YKL123W	YKL123W	MET6	P05694	767 aa	Known RBP	4.85	□□□□□ -1.63
YKL123W	YKL123W	DMC1	P25453	334 aa		4.85	□□□□□ -1.63
YKL123W	YKL123W	UGO1	Q03327	502 aa		4.85	□□□□□ -1.63
YKL123W	YKL123W	RGC1	Q06108	1083 aa	Known RBP	4.85	□□□□□ -1.63
YKL123W	YKL123W	NDJ1	Q12366	352 aa		4.85	□□□□□ -1.63
YKL123W	YKL123W	BNR1	P40450	1375 aa		4.85	□□□□□ -1.63
YKL123W	YKL123W	RNR1	P21524	888 aa	Known RBP	4.84	□□□□□ -1.63
YKL123W	YKL123W	PHO11	P35842	467 aa		4.84	□□□□□ -1.63
YKL123W	YKL123W	PHO12	P38693	467 aa		4.84	□□□□□ -1.63
YKL123W	YKL123W	GET2	P40056	285 aa		4.84	□□□□□ -1.63
YKL123W	YKL123W	ARP4	P80428	489 aa		4.84	□□□□□ -1.63
YKL123W	YKL123W	REC102	Q02721	264 aa		4.84	□□□□□ -1.63
YKL123W	YKL123W	CIT2	P08679	460 aa		4.83	□□□□□ -1.64
YKL123W	YKL123W	THI4	P32318	326 aa		4.83	□□□□□ -1.64
YKL123W	YKL123W	PPZ2	P33329	710 aa		4.83	□□□□□ -1.64
YKL123W	YKL123W	PEX6	P33760	1030 aa		4.83	□□□□□ -1.64
YKL123W	YKL123W	BDH2	P39713	417 aa		4.83	□□□□□ -1.64
YKL123W	YKL123W	ARG2	P40360	574 aa		4.83	□□□□□ -1.64
YKL123W	YKL123W	YIL166C	P40445	542 aa		4.83	□□□□□ -1.64
YKL123W	YKL123W	RAD18	P10862	487 aa		4.82	□□□□□ -1.64
YKL123W	YKL123W	ADY2	P25613	283 aa		4.82	□□□□□ -1.64
YKL123W	YKL123W	UBS1	P38290	277 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 43.4 ms