RNA–Protein interactions for RNA: YKL020C

SPT23, Transcript of ER membrane protein involved in regulation of OLE1 transcription, yeast

Gene SPT23, Length 3,249 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT23	YKL020C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
SPT23	YKL020C	PDE2	P06776	526 aa		4.14	□□□□□ -1.75
SPT23	YKL020C	HSP60	P19882	572 aa	Known RBP	4.14	□□□□□ -1.75
SPT23	YKL020C	GDA1	P32621	518 aa		4.14	□□□□□ -1.75
SPT23	YKL020C	CPR5	P35176	225 aa		4.14	□□□□□ -1.75
SPT23	YKL020C	KES1	P35844	434 aa	Known RBP	4.14	□□□□□ -1.75
SPT23	YKL020C	QDR2	P40474	542 aa		4.14	□□□□□ -1.75
SPT23	YKL020C	YNL108C	P53929	270 aa		4.14	□□□□□ -1.75
SPT23	YKL020C	TRS120	Q04183	1289 aa		4.14	□□□□□ -1.75
SPT23	YKL020C	NUR1	Q12066	484 aa		4.14	□□□□□ -1.75
SPT23	YKL020C	RED1	P14291	827 aa		4.13	□□□□□ -1.75
SPT23	YKL020C	YJU2	P28320	278 aa	Predicted RBP	4.13	□□□□□ -1.75
SPT23	YKL020C	AIM9	P40053	627 aa	Known RBP	4.13	□□□□□ -1.75
SPT23	YKL020C	YER156C	P40093	338 aa	Known RBP	4.13	□□□□□ -1.75
SPT23	YKL020C	YJR061W	P40355	935 aa		4.13	□□□□□ -1.75
SPT23	YKL020C	NIS1	P53939	407 aa		4.13	□□□□□ -1.75
SPT23	YKL020C	SEN54	Q02825	467 aa	Predicted RBP	4.13	□□□□□ -1.75
SPT23	YKL020C	GAD1	Q04792	585 aa		4.13	□□□□□ -1.75
SPT23	YKL020C	ESC8	Q08119	714 aa		4.13	□□□□□ -1.75
SPT23	YKL020C	IES3	Q12345	250 aa		4.13	□□□□□ -1.75
SPT23	YKL020C	ALG1	P16661	449 aa		4.13	□□□□□ -1.75
SPT23	YKL020C	PHO13	P19881	312 aa		4.13	□□□□□ -1.75
SPT23	YKL020C	RDS1	P25611	832 aa		4.13	□□□□□ -1.75
SPT23	YKL020C	CUE2	P36075	443 aa	Known RBP	4.13	□□□□□ -1.75
SPT23	YKL020C	HAL5	P38970	855 aa	Known RBP	4.13	□□□□□ -1.75
SPT23	YKL020C	FCY21	P40039	528 aa		4.13	□□□□□ -1.75
SPT23	YKL020C	STB2	P46679	850 aa		4.13	□□□□□ -1.75
SPT23	YKL020C	SAE2	P46946	345 aa		4.13	□□□□□ -1.75
SPT23	YKL020C	YJL055W	P47044	245 aa		4.13	□□□□□ -1.75
SPT23	YKL020C	SAP4	P53036	818 aa		4.13	□□□□□ -1.75
SPT23	YKL020C	TAF12	Q03761	539 aa		4.13	□□□□□ -1.75
SPT23	YKL020C	SVF1	Q05515	481 aa		4.13	□□□□□ -1.75
SPT23	YKL020C	ATG17	Q06410	417 aa		4.13	□□□□□ -1.75
SPT23	YKL020C	SOG2	Q08817	791 aa		4.13	□□□□□ -1.75
SPT23	YKL020C	ICL2	Q12031	575 aa		4.13	□□□□□ -1.75
SPT23	YKL020C	MSH5	Q12175	901 aa		4.13	□□□□□ -1.75
SPT23	YKL020C	REC8	Q12188	680 aa		4.13	□□□□□ -1.75
SPT23	YKL020C	HAT1	Q12341	374 aa		4.13	□□□□□ -1.75
SPT23	YKL020C	TRP2	P00899	507 aa	Known RBP	4.12	□□□□□ -1.75
SPT23	YKL020C	HO	P09932	586 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	DAP2	P18962	818 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	PRP5	P21372	849 aa	Predicted RBP	4.12	□□□□□ -1.75
SPT23	YKL020C	RAD53	P22216	821 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	HSP30	P25619	332 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	BUD23	P25627	275 aa	Predicted RBP	4.12	□□□□□ -1.75
SPT23	YKL020C	MSH2	P25847	964 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	PEP7	P32609	515 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	VMA8	P32610	256 aa	Known RBP	4.12	□□□□□ -1.75
SPT23	YKL020C	AFG2	P32794	780 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	YPT52	P36018	234 aa	Known RBP	4.12	□□□□□ -1.75
SPT23	YKL020C	BNA6	P43619	295 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	HFM1	P51979	1187 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	MNP1	P53163	194 aa	Predicted RBP	4.12	□□□□□ -1.75
SPT23	YKL020C	SFB2	P53953	876 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	PTA1	Q01329	785 aa	Predicted RBP	4.12	□□□□□ -1.75
SPT23	YKL020C	RPM2	Q02773	1202 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	YDR131C	Q03899	556 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	SPC24	Q04477	213 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	TSR2	Q06672	205 aa	Known RBP	4.12	□□□□□ -1.75
SPT23	YKL020C	PGC1	Q08959	321 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	CPA2	P03965	1118 aa	Known RBP	4.12	□□□□□ -1.75
SPT23	YKL020C	ARG81	P05085	880 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	THR1	P17423	357 aa	Known RBP	4.12	□□□□□ -1.75
SPT23	YKL020C	SFL1	P20134	766 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	MRPL8	P22353	238 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	VPS3	P23643	1011 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	STP2	P38704	541 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	PCI8	P40512	444 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	CNN1	P43618	361 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	ABM1	P47146	123 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	FOL2	P51601	243 aa	Known RBP	4.12	□□□□□ -1.75
SPT23	YKL020C	ERP6	P53198	216 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	YNL193W	P53870	558 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	GTR1	Q00582	310 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	ABZ2	Q03266	374 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	SAS4	Q04003	481 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	YPL150W	Q12152	901 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	SCM3	Q12334	223 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	BCK1	Q01389	1478 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	HCA4	P20448	770 aa	Known RBP	4.12	□□□□□ -1.75
SPT23	YKL020C	TRX1	P22217	103 aa	Known RBP	4.12	□□□□□ -1.75
SPT23	YKL020C	BOI1	P38041	980 aa	Known RBP	4.12	□□□□□ -1.75
SPT23	YKL020C	HXT6	P39003	570 aa	Known RBP	4.12	□□□□□ -1.75
SPT23	YKL020C	HXT7	P39004	570 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	EDC3	P39998	551 aa	Known RBP	4.12	□□□□□ -1.75
SPT23	YKL020C	YER186C	P40101	306 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	COG6	P53959	839 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	CIK1	Q01649	594 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	YDR090C	Q03193	310 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	VPS38	Q05919	439 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	YLR326W	Q06170	240 aa	Known RBP	4.12	□□□□□ -1.75
SPT23	YKL020C	YPQ2	Q06328	317 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	EAF1	Q06337	982 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	OSW1	Q08692	278 aa		4.12	□□□□□ -1.75
SPT23	YKL020C	GPN2	Q08726	347 aa	Predicted RBP	4.12	□□□□□ -1.75
SPT23	YKL020C	STF1	P01098	86 aa		4.11	□□□□□ -1.75
SPT23	YKL020C	HOM2	P13663	365 aa	Known RBP	4.11	□□□□□ -1.75
SPT23	YKL020C	MSS116	P15424	664 aa	Known RBP	4.11	□□□□□ -1.75
SPT23	YKL020C	PEX1	P24004	1043 aa		4.11	□□□□□ -1.75
SPT23	YKL020C	YME1	P32795	747 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 88.6 ms