RNA–Protein interactions for RNA: YHR085W

IPI1, Transcript of Component of the Rix1 complex and possibly pre-replicative complexes, yeast

Gene IPI1, Length 1,005 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IPI1	YHR085W	TMA17	Q12513	150 aa		6.28	□□□□□ -1.4
IPI1	YHR085W	TMA7	Q3E764	64 aa	Known RBP	6.28	□□□□□ -1.4
IPI1	YHR085W	HBN1	Q96VH4	193 aa		6.28	□□□□□ -1.4
IPI1	YHR085W	MYO1	P08964	1928 aa		6.28	□□□□□ -1.4
IPI1	YHR085W	KRS1	P15180	591 aa	Known RBP	6.27	□□□□□ -1.41
IPI1	YHR085W	PWP2	P25635	923 aa	Known RBP	6.27	□□□□□ -1.41
IPI1	YHR085W	CHS3	P29465	1165 aa		6.27	□□□□□ -1.41
IPI1	YHR085W	DOM34	P33309	386 aa		6.27	□□□□□ -1.41
IPI1	YHR085W	ARL1	P38116	183 aa	Known RBP	6.27	□□□□□ -1.41
IPI1	YHR085W	MCM7	P38132	845 aa		6.27	□□□□□ -1.41
IPI1	YHR085W	YBL028C	P38202	106 aa		6.27	□□□□□ -1.41
IPI1	YHR085W	TIF4631	P39935	952 aa	Known RBP	6.27	□□□□□ -1.41
IPI1	YHR085W	NEO1	P40527	1151 aa		6.27	□□□□□ -1.41
IPI1	YHR085W	SPO74	P45819	413 aa		6.27	□□□□□ -1.41
IPI1	YHR085W	CEF1	Q03654	590 aa	Predicted RBP	6.27	□□□□□ -1.41
IPI1	YHR085W	UTP5	Q04177	643 aa	Known RBP	6.27	□□□□□ -1.41
IPI1	YHR085W	THI73	Q07904	523 aa		6.27	□□□□□ -1.41
IPI1	YHR085W	YPL260W	Q08977	551 aa		6.27	□□□□□ -1.41
IPI1	YHR085W	MDM12	Q92328	271 aa		6.27	□□□□□ -1.41
IPI1	YHR085W	TOM70	P07213	617 aa	Known RBP	6.26	□□□□□ -1.41
IPI1	YHR085W	GSY1	P23337	708 aa		6.26	□□□□□ -1.41
IPI1	YHR085W	PRE8	P23639	250 aa		6.26	□□□□□ -1.41
IPI1	YHR085W	VID27	P40157	782 aa		6.26	□□□□□ -1.41
IPI1	YHR085W	HNT2	P49775	206 aa		6.26	□□□□□ -1.41
IPI1	YHR085W	MAL11	P53048	616 aa		6.26	□□□□□ -1.41
IPI1	YHR085W	UME1	Q03010	460 aa		6.26	□□□□□ -1.41
IPI1	YHR085W	RKM2	Q03942	479 aa		6.26	□□□□□ -1.41
IPI1	YHR085W	SLX4	Q12098	748 aa		6.26	□□□□□ -1.41
IPI1	YHR085W	RAD61	Q99359	647 aa		6.26	□□□□□ -1.41
IPI1	YHR085W	FBP1	P09201	348 aa		6.25	□□□□□ -1.41
IPI1	YHR085W	SRP54	P20424	541 aa	Known RBP	6.25	□□□□□ -1.41
IPI1	YHR085W	DPB3	P27344	201 aa		6.25	□□□□□ -1.41
IPI1	YHR085W	HBS1	P32769	611 aa	Known RBP	6.25	□□□□□ -1.41
IPI1	YHR085W	VPS24	P36095	224 aa	Known RBP	6.25	□□□□□ -1.41
IPI1	YHR085W	CSM2	P40465	213 aa		6.25	□□□□□ -1.41
IPI1	YHR085W	YIG1	Q08956	461 aa		6.25	□□□□□ -1.41
IPI1	YHR085W	YPL066W	Q12194	479 aa		6.25	□□□□□ -1.41
IPI1	YHR085W	VPS13	Q07878	3144 aa		6.25	□□□□□ -1.41
IPI1	YHR085W	TUS1	Q06412	1307 aa		6.25	□□□□□ -1.41
IPI1	YHR085W	CYC7	P00045	113 aa		6.24	□□□□□ -1.41
IPI1	YHR085W	SAM2	P19358	384 aa	Known RBP	6.24	□□□□□ -1.41
IPI1	YHR085W	ACE2	P21192	770 aa		6.24	□□□□□ -1.41
IPI1	YHR085W	MSB1	P21339	1137 aa	Known RBP	6.24	□□□□□ -1.41
IPI1	YHR085W	ANP1	P32629	500 aa		6.24	□□□□□ -1.41
IPI1	YHR085W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	6.24	□□□□□ -1.41	not detected
IPI1	YHR085W	NEM1	P38757	446 aa		6.24	□□□□□ -1.41
IPI1	YHR085W	DSS1	P39112	969 aa		6.24	□□□□□ -1.41
IPI1	YHR085W	ACA1	P39970	489 aa		6.24	□□□□□ -1.41
IPI1	YHR085W	SLS1	P42900	643 aa		6.24	□□□□□ -1.41
IPI1	YHR085W	DAS1	P47005	663 aa		6.24	□□□□□ -1.41
IPI1	YHR085W	SDA1	P53313	767 aa	Known RBP	6.24	□□□□□ -1.41
IPI1	YHR085W	NCE103	P53615	221 aa		6.24	□□□□□ -1.41
IPI1	YHR085W	MYO5	Q04439	1219 aa	Known RBP	6.24	□□□□□ -1.41
IPI1	YHR085W	ELG1	Q12050	791 aa		6.24	□□□□□ -1.41
IPI1	YHR085W	FAP7	Q12055	197 aa	Predicted RBP	6.24	□□□□□ -1.41
IPI1	YHR085W	TY1A-LR4	P0C2I8	440 aa	Known RBP	6.23	□□□□□ -1.41
IPI1	YHR085W	TY1A-DR6	P0CX70	440 aa		6.23	□□□□□ -1.41
IPI1	YHR085W	TY1A-ER1	P0CX71	440 aa		6.23	□□□□□ -1.41
IPI1	YHR085W	TY1A-LR2	P0CX72	440 aa		6.23	□□□□□ -1.41
IPI1	YHR085W	TY1A-PL	P0CX73	440 aa		6.23	□□□□□ -1.41
IPI1	YHR085W	TY1A-JR1	P0CX74	440 aa		6.23	□□□□□ -1.41
IPI1	YHR085W	TY1A-LR3	P0CX75	440 aa		6.23	□□□□□ -1.41
IPI1	YHR085W	TY1A-ML2	P0CX76	440 aa		6.23	□□□□□ -1.41
IPI1	YHR085W	RGD1	P38339	666 aa		6.23	□□□□□ -1.41
IPI1	YHR085W	CRG1	P38892	291 aa	RIP-Chip data	6.23	□□□□□ -1.41	not detected
IPI1	YHR085W	MPH1	P40562	993 aa		6.23	□□□□□ -1.41
IPI1	YHR085W	UBP6	P43593	499 aa	Known RBP	6.23	□□□□□ -1.41
IPI1	YHR085W	RRT6	P53117	311 aa	Predicted RBP	6.23	□□□□□ -1.41
IPI1	YHR085W	DUS1	P53759	423 aa	Known RBP	6.23	□□□□□ -1.41
IPI1	YHR085W	TFC6	Q06339	672 aa		6.23	□□□□□ -1.41
IPI1	YHR085W	LAP2	Q10740	671 aa		6.23	□□□□□ -1.41
IPI1	YHR085W	TY1A-GR1	Q12085	440 aa		6.23	□□□□□ -1.41
IPI1	YHR085W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	6.23	□□□□□ -1.41
IPI1	YHR085W	TY1A-OL	Q92392	440 aa	Known RBP	6.23	□□□□□ -1.41
IPI1	YHR085W	ATP4	P05626	244 aa		6.22	□□□□□ -1.41
IPI1	YHR085W	TOP3	P13099	656 aa		6.22	□□□□□ -1.41
IPI1	YHR085W	RIT1	P23796	513 aa		6.22	□□□□□ -1.41
IPI1	YHR085W	PEP3	P27801	918 aa		6.22	□□□□□ -1.41
IPI1	YHR085W	IMP2'	P32351	346 aa		6.22	□□□□□ -1.41
IPI1	YHR085W	AAR2	P32357	355 aa	Predicted RBP	6.22	□□□□□ -1.41
IPI1	YHR085W	CST26	P38226	397 aa		6.22	□□□□□ -1.41
IPI1	YHR085W	HFD1	Q04458	532 aa		6.22	□□□□□ -1.41
IPI1	YHR085W	MRD1	Q06106	887 aa	Known RBP	6.22	□□□□□ -1.41
IPI1	YHR085W	SPN1	Q06505	410 aa	Predicted RBP	6.22	□□□□□ -1.41
IPI1	YHR085W	SUE1	Q06524	206 aa		6.22	□□□□□ -1.41
IPI1	YHR085W	YOR378W	Q08902	515 aa		6.22	□□□□□ -1.41
IPI1	YHR085W	GNT1	Q12096	491 aa		6.22	□□□□□ -1.41
IPI1	YHR085W	GIN4	Q12263	1142 aa		6.22	□□□□□ -1.41
IPI1	YHR085W	MAK31	P23059	88 aa		6.21	□□□□□ -1.42
IPI1	YHR085W	YBR284W	P38150	797 aa		6.21	□□□□□ -1.42
IPI1	YHR085W	NDT80	P38830	627 aa		6.21	□□□□□ -1.42
IPI1	YHR085W	VID28	P40547	921 aa		6.21	□□□□□ -1.42
IPI1	YHR085W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	6.21	□□□□□ -1.42	not detected
IPI1	YHR085W	YJR120W	P47157	116 aa		6.21	□□□□□ -1.42
IPI1	YHR085W	GCV1	P48015	400 aa		6.21	□□□□□ -1.42
IPI1	YHR085W	YLR001C	Q07895	862 aa		6.21	□□□□□ -1.42
IPI1	YHR085W	ERS1	P17261	260 aa		6.2	□□□□□ -1.42
IPI1	YHR085W	MEF1	P25039	761 aa		6.2	□□□□□ -1.42
IPI1	YHR085W	VBA3	P25594	458 aa		6.2	□□□□□ -1.42
IPI1	YHR085W	MLS1	P30952	554 aa		6.2	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 78.3 ms