RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C TAF4P50105 388 aa5.12□□□□□ -1.59
SEC9YGR009C YBP2P53169 641 aa5.12□□□□□ -1.59
SEC9YGR009C YGR054WP53235 642 aaKnown RBP5.12□□□□□ -1.59
SEC9YGR009C TOF1P53840 1238 aa5.12□□□□□ -1.59
SEC9YGR009C DAK1P54838 584 aaKnown RBP5.12□□□□□ -1.59
SEC9YGR009C UTP5Q04177 643 aaKnown RBP5.12□□□□□ -1.59
SEC9YGR009C RBS1Q05672 457 aaKnown RBP5.12□□□□□ -1.59
SEC9YGR009C GMC2Q06201 188 aa5.12□□□□□ -1.59
SEC9YGR009C VIK1Q12045 647 aa5.12□□□□□ -1.59
SEC9YGR009C SPO21Q12411 609 aa5.12□□□□□ -1.59
SEC9YGR009C TRP5P00931 707 aaKnown RBP5.11□□□□□ -1.59
SEC9YGR009C HIS3P06633 220 aa5.11□□□□□ -1.59
SEC9YGR009C FBP1P09201 348 aa5.11□□□□□ -1.59
SEC9YGR009C MET8P15807 274 aa5.11□□□□□ -1.59
SEC9YGR009C CBP3P21560 335 aa5.11□□□□□ -1.59
SEC9YGR009C RAD53P22216 821 aa5.11□□□□□ -1.59
SEC9YGR009C RET1P22276 1149 aaKnown RBP5.11□□□□□ -1.59
SEC9YGR009C SEC14P24280 304 aaKnown RBP5.11□□□□□ -1.59
SEC9YGR009C CLB3P24870 427 aa5.11□□□□□ -1.59
SEC9YGR009C PTC3P34221 468 aaKnown RBP5.11□□□□□ -1.59
SEC9YGR009C SEG2P34250 1132 aa5.11□□□□□ -1.59
SEC9YGR009C SDS22P36047 338 aa5.11□□□□□ -1.59
SEC9YGR009C SEC31P38968 1273 aaKnown RBP5.11□□□□□ -1.59
SEC9YGR009C SAK1P38990 1142 aa5.11□□□□□ -1.59
SEC9YGR009C ULP2P40537 1034 aaPredicted RBP5.11□□□□□ -1.59
SEC9YGR009C YJR098CP47139 656 aa5.11□□□□□ -1.59
SEC9YGR009C HSH155P49955 971 aaKnown RBP5.11□□□□□ -1.59
SEC9YGR009C MEP3P53390 489 aa5.11□□□□□ -1.59
SEC9YGR009C COP1P53622 1201 aaKnown RBP5.11□□□□□ -1.59
SEC9YGR009C YNL108CP53929 270 aa5.11□□□□□ -1.59
SEC9YGR009C STE20Q03497 939 aaKnown RBP5.11□□□□□ -1.59
SEC9YGR009C TDA9Q04545 1251 aa5.11□□□□□ -1.59
SEC9YGR009C ARP10Q04549 284 aa5.11□□□□□ -1.59
SEC9YGR009C RTT103Q05543 409 aa5.11□□□□□ -1.59
SEC9YGR009C MRX10Q05648 414 aa5.11□□□□□ -1.59
SEC9YGR009C ATG17Q06410 417 aa5.11□□□□□ -1.59
SEC9YGR009C VPS36Q06696 566 aa5.11□□□□□ -1.59
SEC9YGR009C YOR296WQ08748 1289 aa5.11□□□□□ -1.59
SEC9YGR009C ICL2Q12031 575 aa5.11□□□□□ -1.59
SEC9YGR009C ATG29Q12092 213 aa5.11□□□□□ -1.59
SEC9YGR009C CHS5Q12114 671 aaKnown RBP5.11□□□□□ -1.59
SEC9YGR009C HXK1P04806 485 aaKnown RBP5.11□□□□□ -1.59
SEC9YGR009C CDC37P06101 506 aaKnown RBP5.11□□□□□ -1.59
SEC9YGR009C CYT1P07143 309 aa5.11□□□□□ -1.59
SEC9YGR009C MIH1P23748 554 aa5.11□□□□□ -1.59
SEC9YGR009C CDC12P32468 407 aaKnown RBP5.11□□□□□ -1.59
SEC9YGR009C PET309P32522 965 aaPredicted RBP5.11□□□□□ -1.59
SEC9YGR009C HSP78P33416 811 aa5.11□□□□□ -1.59
SEC9YGR009C CPR5P35176 225 aa5.11□□□□□ -1.59
SEC9YGR009C YMR262WP38430 313 aa5.11□□□□□ -1.59
SEC9YGR009C SAW1P39735 261 aa5.11□□□□□ -1.59
SEC9YGR009C SLN1P39928 1220 aaPredicted RBP5.11□□□□□ -1.59
SEC9YGR009C EDC3P39998 551 aaKnown RBP5.11□□□□□ -1.59
SEC9YGR009C YRB2P40517 327 aa5.11□□□□□ -1.59
SEC9YGR009C MND2P40577 368 aa5.11□□□□□ -1.59
SEC9YGR009C IRC6P43615 237 aa5.11□□□□□ -1.59
SEC9YGR009C PMT3P47190 753 aa5.11□□□□□ -1.59
SEC9YGR009C ALO1P54783 526 aaKnown RBP5.11□□□□□ -1.59
SEC9YGR009C CUS1Q02554 436 aaPredicted RBP5.11□□□□□ -1.59
SEC9YGR009C EGD1Q02642 157 aaKnown RBP5.11□□□□□ -1.59
SEC9YGR009C YPL109CQ02981 657 aa5.11□□□□□ -1.59
SEC9YGR009C EAR1Q03212 550 aa5.11□□□□□ -1.59
SEC9YGR009C KAP95Q06142 861 aaKnown RBP5.11□□□□□ -1.59
SEC9YGR009C EAF1Q06337 982 aa5.11□□□□□ -1.59
SEC9YGR009C VAM6Q07468 1049 aa5.11□□□□□ -1.59
SEC9YGR009C FMP40Q08968 688 aaPredicted RBP5.11□□□□□ -1.59
SEC9YGR009C CMC2Q3E7A4 109 aa5.11□□□□□ -1.59
SEC9YGR009C YLR358CO13565 187 aa5.1□□□□□ -1.59
SEC9YGR009C COX6P00427 148 aa5.1□□□□□ -1.59
SEC9YGR009C ENO1P00924 437 aaKnown RBP5.1□□□□□ -1.59
SEC9YGR009C YPK2P18961 677 aa5.1□□□□□ -1.59
SEC9YGR009C RRP43P25359 394 aaPredicted RBP5.1□□□□□ -1.59
SEC9YGR009C PRD1P25375 712 aa5.1□□□□□ -1.59
SEC9YGR009C SFP1P32432 683 aa5.1□□□□□ -1.59
SEC9YGR009C PHO11P35842 467 aa5.1□□□□□ -1.59
SEC9YGR009C PHO12P38693 467 aa5.1□□□□□ -1.59
SEC9YGR009C STL1P39932 569 aa5.1□□□□□ -1.59
SEC9YGR009C TPA1P40032 644 aaKnown RBP5.1□□□□□ -1.59
SEC9YGR009C YER137CP40083 148 aaKnown RBP5.1□□□□□ -1.59
SEC9YGR009C YER156CP40093 338 aaKnown RBP5.1□□□□□ -1.59
SEC9YGR009C JJJ2P46997 583 aa5.1□□□□□ -1.59
SEC9YGR009C LIA1P47120 325 aaKnown RBP5.1□□□□□ -1.59
SEC9YGR009C MRPS17Q03246 237 aaPredicted RBP5.1□□□□□ -1.59
SEC9YGR009C CWC15Q03772 175 aaKnown RBP5.1□□□□□ -1.59
SEC9YGR009C SPC24Q04477 213 aa5.1□□□□□ -1.59
SEC9YGR009C NUT2Q06213 157 aa5.1□□□□□ -1.59
SEC9YGR009C NTG2Q08214 380 aa5.1□□□□□ -1.59
SEC9YGR009C RRT8Q08219 342 aa5.1□□□□□ -1.59
SEC9YGR009C DSE3Q08729 430 aa5.1□□□□□ -1.59
SEC9YGR009C KEL3Q08979 651 aaPredicted RBP5.1□□□□□ -1.59
SEC9YGR009C PDX1P16451 410 aa5.09□□□□□ -1.59
SEC9YGR009C SED4P25365 1065 aa5.09□□□□□ -1.59
SEC9YGR009C CDC15P27636 974 aa5.09□□□□□ -1.59
SEC9YGR009C KTR1P27810 393 aaKnown RBP5.09□□□□□ -1.59
SEC9YGR009C KAR9P32526 644 aa5.09□□□□□ -1.59
SEC9YGR009C KAP104P38217 918 aaKnown RBP5.09□□□□□ -1.59
SEC9YGR009C UBS1P38290 277 aa5.09□□□□□ -1.59
SEC9YGR009C APM2P38700 605 aa5.09□□□□□ -1.59
SEC9YGR009C SIP3P38717 1229 aa5.09□□□□□ -1.59
SEC9YGR009C YHL041WP38730 149 aa5.09□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms