RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W TFB1P32776 642 aa5.78□□□□□ -1.48
PDE1YGL248W YEL1P34225 687 aa5.78□□□□□ -1.48
PDE1YGL248W BYE1P36106 594 aa5.78□□□□□ -1.48
PDE1YGL248W QRI7P43122 407 aa5.78□□□□□ -1.48
PDE1YGL248W CTH1P47976 325 aa5.78□□□□□ -1.48
PDE1YGL248W YAP1802P53309 568 aa5.78□□□□□ -1.48
PDE1YGL248W SFB2P53953 876 aa5.78□□□□□ -1.48
PDE1YGL248W ARA2Q04212 335 aa5.78□□□□□ -1.48
PDE1YGL248W YCG1Q06680 1035 aa5.78□□□□□ -1.48
PDE1YGL248W RMP1Q12530 201 aa5.78□□□□□ -1.48
PDE1YGL248W HOM2P13663 365 aaKnown RBP5.77□□□□□ -1.49
PDE1YGL248W VBA3P25594 458 aa5.77□□□□□ -1.49
PDE1YGL248W NTG1P31378 399 aa5.77□□□□□ -1.49
PDE1YGL248W PAH1P32567 862 aa5.77□□□□□ -1.49
PDE1YGL248W ABD1P32783 436 aaPredicted RBP5.77□□□□□ -1.49
PDE1YGL248W MDL1P33310 695 aa5.77□□□□□ -1.49
PDE1YGL248W MUD2P36084 527 aaKnown RBP5.77□□□□□ -1.49
PDE1YGL248W SIT1P39980 628 aa5.77□□□□□ -1.49
PDE1YGL248W KAP123P40069 1113 aaKnown RBP5.77□□□□□ -1.49
PDE1YGL248W RGD2P43556 714 aa5.77□□□□□ -1.49
PDE1YGL248W VPS53P47061 822 aa5.77□□□□□ -1.49
PDE1YGL248W UPF3P48412 387 aaKnown RBP5.77□□□□□ -1.49
PDE1YGL248W ZIP2P53061 704 aa5.77□□□□□ -1.49
PDE1YGL248W MET13P53128 600 aa5.77□□□□□ -1.49
PDE1YGL248W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.77□□□□□ -1.49not detected
PDE1YGL248W ARP9Q05123 467 aa5.77□□□□□ -1.49
PDE1YGL248W CYC7P00045 113 aa5.76□□□□□ -1.49
PDE1YGL248W PMS1P14242 873 aa5.76□□□□□ -1.49
PDE1YGL248W AAC3P18238 307 aa5.76□□□□□ -1.49
PDE1YGL248W MCM5P29496 775 aaKnown RBP5.76□□□□□ -1.49
PDE1YGL248W HEM12P32347 362 aaPredicted RBP5.76□□□□□ -1.49
PDE1YGL248W ATG19P35193 415 aa5.76□□□□□ -1.49
PDE1YGL248W MAE1P36013 669 aaKnown RBP5.76□□□□□ -1.49
PDE1YGL248W MIC60P36112 540 aa5.76□□□□□ -1.49
PDE1YGL248W BIT2P38346 545 aa5.76□□□□□ -1.49
PDE1YGL248W PEX18P38855 283 aa5.76□□□□□ -1.49
PDE1YGL248W CKB2P38930 258 aa5.76□□□□□ -1.49
PDE1YGL248W OAF1P39720 1047 aaPredicted RBP5.76□□□□□ -1.49
PDE1YGL248W TPA1P40032 644 aaKnown RBP5.76□□□□□ -1.49
PDE1YGL248W PIC2P40035 300 aa5.76□□□□□ -1.49
PDE1YGL248W VHR1P40522 640 aa5.76□□□□□ -1.49
PDE1YGL248W MAD3P47074 515 aa5.76□□□□□ -1.49
PDE1YGL248W YJR096WP47137 282 aa5.76□□□□□ -1.49
PDE1YGL248W YNL247WP53852 767 aaKnown RBP5.76□□□□□ -1.49
PDE1YGL248W MRL1Q06815 381 aa5.76□□□□□ -1.49
PDE1YGL248W CUE5Q08412 411 aaKnown RBP5.76□□□□□ -1.49
PDE1YGL248W RPB2P08518 1224 aaKnown RBP5.75□□□□□ -1.49
PDE1YGL248W ILS1P09436 1072 aaKnown RBP5.75□□□□□ -1.49
PDE1YGL248W OM45P16547 393 aa5.75□□□□□ -1.49
PDE1YGL248W KAR3P17119 729 aa5.75□□□□□ -1.49
PDE1YGL248W SEC18P18759 758 aaKnown RBP5.75□□□□□ -1.49
PDE1YGL248W DAL7P21826 554 aa5.75□□□□□ -1.49
PDE1YGL248W MNE1P24720 663 aa5.75□□□□□ -1.49
PDE1YGL248W MSH1P25846 959 aa5.75□□□□□ -1.49
PDE1YGL248W SSE1P32589 693 aaKnown RBP5.75□□□□□ -1.49
PDE1YGL248W REI1P38344 393 aaPredicted RBP5.75□□□□□ -1.49
PDE1YGL248W YER034WP40022 185 aaKnown RBP5.75□□□□□ -1.49
PDE1YGL248W KHA1P40309 873 aa5.75□□□□□ -1.49
PDE1YGL248W AIM20P40451 204 aa5.75□□□□□ -1.49
PDE1YGL248W CCT7P42943 550 aaKnown RBP5.75□□□□□ -1.49
PDE1YGL248W GZF3P42944 551 aaKnown RBP5.75□□□□□ -1.49
PDE1YGL248W AGX1P43567 385 aa5.75□□□□□ -1.49
PDE1YGL248W POL31P46957 487 aa5.75□□□□□ -1.49
PDE1YGL248W AIM14P53109 570 aa5.75□□□□□ -1.49
PDE1YGL248W PCL10P53124 433 aa5.75□□□□□ -1.49
PDE1YGL248W SLD3P53135 668 aa5.75□□□□□ -1.49
PDE1YGL248W ULP1Q02724 621 aa5.75□□□□□ -1.49
PDE1YGL248W RRN5Q02983 363 aa5.75□□□□□ -1.49
PDE1YGL248W DPB4Q04603 196 aaKnown RBP5.75□□□□□ -1.49
PDE1YGL248W UTP21Q06078 939 aaPredicted RBP5.75□□□□□ -1.49
PDE1YGL248W ISA2Q12425 185 aa5.75□□□□□ -1.49
PDE1YGL248W RAD53P22216 821 aa5.74□□□□□ -1.49
PDE1YGL248W KTR2P33550 425 aa5.74□□□□□ -1.49
PDE1YGL248W MTH1P35198 433 aa5.74□□□□□ -1.49
PDE1YGL248W YLF2P38746 405 aa5.74□□□□□ -1.49
PDE1YGL248W SMC2P38989 1170 aaKnown RBP5.74□□□□□ -1.49
PDE1YGL248W GDI1P39958 451 aaKnown RBP5.74□□□□□ -1.49
PDE1YGL248W NTA1P40354 457 aa5.74□□□□□ -1.49
PDE1YGL248W CIR1P42940 261 aa5.74□□□□□ -1.49
PDE1YGL248W SAP155P43612 1002 aa5.74□□□□□ -1.49
PDE1YGL248W NUP84P52891 726 aa5.74□□□□□ -1.49
PDE1YGL248W YGL140CP53120 1219 aa5.74□□□□□ -1.49
PDE1YGL248W CIK1Q01649 594 aa5.74□□□□□ -1.49
PDE1YGL248W PEX25Q02969 394 aa5.74□□□□□ -1.49
PDE1YGL248W FDC1Q03034 503 aa5.74□□□□□ -1.49
PDE1YGL248W HOT1Q03213 719 aa5.74□□□□□ -1.49
PDE1YGL248W FCP1Q03254 732 aa5.74□□□□□ -1.49
PDE1YGL248W ELG1Q12050 791 aa5.74□□□□□ -1.49
PDE1YGL248W SEM1O94742 89 aa5.73□□□□□ -1.49
PDE1YGL248W TRP2P00899 507 aaKnown RBP5.73□□□□□ -1.49
PDE1YGL248W GFA1P14742 717 aaKnown RBP5.73□□□□□ -1.49
PDE1YGL248W MET8P15807 274 aa5.73□□□□□ -1.49
PDE1YGL248W PRP28P23394 588 aa5.73□□□□□ -1.49
PDE1YGL248W PUF4P25339 888 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
PDE1YGL248W PPQ1P32945 549 aa5.73□□□□□ -1.49
PDE1YGL248W XRS2P33301 854 aa5.73□□□□□ -1.49
PDE1YGL248W DOM34P33309 386 aa5.73□□□□□ -1.49
PDE1YGL248W SLC1P33333 303 aa5.73□□□□□ -1.49
PDE1YGL248W SEA4P38164 1038 aa5.73□□□□□ -1.49
PDE1YGL248W CTM1P38818 585 aa5.73□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms