RNA–Protein interactions for RNA: YFR034C

PHO4, Transcript of Basic helix-loop-helix (bHLH) transcription factor of the myc-family, yeastyeast

Gene PHO4, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO4YFR034C PTC4P38089 393 aa13.71□□□□□ -0.21
PHO4YFR034C RIM8P53179 542 aa13.71□□□□□ -0.21
PHO4YFR034C YML020WQ03722 664 aa13.71□□□□□ -0.21
PHO4YFR034C ATG16Q03818 150 aa13.71□□□□□ -0.21
PHO4YFR034C ABP140Q08641 628 aaKnown RBP13.71□□□□□ -0.21
PHO4YFR034C ZPS1Q12512 249 aa13.71□□□□□ -0.21
PHO4YFR034C WHI2P12611 486 aa13.7□□□□□ -0.22
PHO4YFR034C RRT12P25381 491 aa13.7□□□□□ -0.22
PHO4YFR034C ETP1P38748 585 aaKnown RBP13.7□□□□□ -0.22
PHO4YFR034C SAP1P39955 897 aaKnown RBP13.7□□□□□ -0.22
PHO4YFR034C KAP123P40069 1113 aaKnown RBP13.7□□□□□ -0.22
PHO4YFR034C YDR278CQ05612 105 aa13.7□□□□□ -0.22
PHO4YFR034C UTP13Q05946 817 aaKnown RBP13.7□□□□□ -0.22
PHO4YFR034C ASP3-2P0CX77 362 aa13.69□□□□□ -0.22
PHO4YFR034C ASP3-3P0CX78 362 aa13.69□□□□□ -0.22
PHO4YFR034C ASP3-4P0CX79 362 aa13.69□□□□□ -0.22
PHO4YFR034C ASP3-1P0CZ17 362 aa13.69□□□□□ -0.22
PHO4YFR034C RPL4AP10664 362 aaKnown RBP13.69□□□□□ -0.22
PHO4YFR034C SCJ1P25303 377 aa13.69□□□□□ -0.22
PHO4YFR034C ECM32P32644 1121 aaKnown RBP13.69□□□□□ -0.22
PHO4YFR034C UBC6P33296 250 aaPredicted RBP13.69□□□□□ -0.22
PHO4YFR034C LAS1P36146 502 aaPredicted RBP13.69□□□□□ -0.22
PHO4YFR034C RPL4BP49626 362 aaKnown RBP13.69□□□□□ -0.22
PHO4YFR034C YMR187CQ03236 431 aa13.69□□□□□ -0.22
PHO4YFR034C MSC2Q03455 724 aa13.69□□□□□ -0.22
PHO4YFR034C TDA9Q04545 1251 aa13.69□□□□□ -0.22
PHO4YFR034C ERV41Q04651 352 aa13.69□□□□□ -0.22
PHO4YFR034C PUF3Q07807 879 aaKnown RBP RIP-Chip data13.69□□□□□ -0.22not detected
PHO4YFR034C RAD1P06777 1100 aa13.68□□□□□ -0.22
PHO4YFR034C SPP381P38282 291 aaPredicted RBP13.68□□□□□ -0.22
PHO4YFR034C SAK1P38990 1142 aa13.68□□□□□ -0.22
PHO4YFR034C SAD1P43589 448 aa13.68□□□□□ -0.22
PHO4YFR034C GYL1Q04322 720 aa13.68□□□□□ -0.22
PHO4YFR034C SGT2Q12118 346 aaKnown RBP13.68□□□□□ -0.22
PHO4YFR034C ATG11Q12527 1178 aa13.68□□□□□ -0.22
PHO4YFR034C SNA3P14359 133 aa13.67□□□□□ -0.22
PHO4YFR034C TRM2P33753 639 aa13.67□□□□□ -0.22
PHO4YFR034C MMS21P38632 267 aa13.67□□□□□ -0.22
PHO4YFR034C YNL320WP42840 284 aa13.67□□□□□ -0.22
PHO4YFR034C RNT1Q02555 471 aa13.67□□□□□ -0.22
PHO4YFR034C ICL2Q12031 575 aa13.67□□□□□ -0.22
PHO4YFR034C RUD3Q12234 484 aaKnown RBP13.67□□□□□ -0.22
PHO4YFR034C TIF6Q12522 245 aaKnown RBP13.67□□□□□ -0.22
PHO4YFR034C YER152CP10356 443 aa13.66□□□□□ -0.22
PHO4YFR034C PRP9P19736 530 aaKnown RBP13.66□□□□□ -0.22
PHO4YFR034C AFT1P22149 690 aa13.66□□□□□ -0.22
PHO4YFR034C VMA4P22203 233 aaKnown RBP13.66□□□□□ -0.22
PHO4YFR034C CAP1P28495 268 aaKnown RBP13.66□□□□□ -0.22
PHO4YFR034C YBL055CP34220 418 aaPredicted RBP13.66□□□□□ -0.22
PHO4YFR034C END3P39013 349 aa13.66□□□□□ -0.22
PHO4YFR034C ASG1P40467 964 aa13.66□□□□□ -0.22
PHO4YFR034C CTK3P46963 296 aaPredicted RBP13.66□□□□□ -0.22
PHO4YFR034C CUS1Q02554 436 aaPredicted RBP13.66□□□□□ -0.22
PHO4YFR034C MTG1Q03151 367 aaPredicted RBP13.66□□□□□ -0.22
PHO4YFR034C OMS1Q06668 471 aa13.66□□□□□ -0.22
PHO4YFR034C COX4P04037 155 aa13.65□□□□□ -0.22
PHO4YFR034C MSH1P25846 959 aa13.65□□□□□ -0.22
PHO4YFR034C MSS51P32335 436 aa13.65□□□□□ -0.22
PHO4YFR034C GYP6P32806 458 aa13.65□□□□□ -0.22
PHO4YFR034C TIF5P38431 405 aaKnown RBP13.65□□□□□ -0.22
PHO4YFR034C SAH1P39954 449 aaKnown RBP13.65□□□□□ -0.22
PHO4YFR034C PUS2P53167 370 aa13.65□□□□□ -0.22
PHO4YFR034C STE23Q06010 1027 aa13.65□□□□□ -0.22
PHO4YFR034C BI2P03873 423 aa13.64□□□□□ -0.23
PHO4YFR034C BI4P03879 638 aa13.64□□□□□ -0.23
PHO4YFR034C GAL10P04397 699 aa13.64□□□□□ -0.23
PHO4YFR034C ADE3P07245 946 aaKnown RBP13.64□□□□□ -0.23
PHO4YFR034C DBP1P24784 617 aaKnown RBP13.64□□□□□ -0.23
PHO4YFR034C PMC1P38929 1173 aaPredicted RBP13.64□□□□□ -0.23
PHO4YFR034C SKP2P42843 763 aa13.64□□□□□ -0.23
PHO4YFR034C ULI1P43604 169 aa13.64□□□□□ -0.23
PHO4YFR034C NMD5P46970 1048 aa13.64□□□□□ -0.23
PHO4YFR034C YJR039WP47107 1121 aa13.64□□□□□ -0.23
PHO4YFR034C UTP6Q02354 440 aaKnown RBP13.64□□□□□ -0.23
PHO4YFR034C UFO1Q04511 668 aa13.64□□□□□ -0.23
PHO4YFR034C SFH1Q06168 426 aa13.64□□□□□ -0.23
PHO4YFR034C BI3Q9ZZW7 517 aa13.64□□□□□ -0.23
PHO4YFR034C PRR1P28708 518 aa13.63□□□□□ -0.23
PHO4YFR034C ABD1P32783 436 aaPredicted RBP13.63□□□□□ -0.23
PHO4YFR034C BCS1P32839 456 aa13.63□□□□□ -0.23
PHO4YFR034C SEG2P34250 1132 aa13.63□□□□□ -0.23
PHO4YFR034C CBR1P38626 284 aaKnown RBP13.63□□□□□ -0.23
PHO4YFR034C AIM21P40563 679 aa13.63□□□□□ -0.23
PHO4YFR034C ZAP1P47043 880 aa13.63□□□□□ -0.23
PHO4YFR034C DAK1P54838 584 aaKnown RBP13.63□□□□□ -0.23
PHO4YFR034C GLN3P18494 730 aa13.62□□□□□ -0.23
PHO4YFR034C GCD6P32501 712 aaKnown RBP13.62□□□□□ -0.23
PHO4YFR034C ECM2P38241 364 aaKnown RBP13.62□□□□□ -0.23
PHO4YFR034C RGD1P38339 666 aa13.62□□□□□ -0.23
PHO4YFR034C BRE5P53741 515 aaKnown RBP13.62□□□□□ -0.23
PHO4YFR034C CWC21Q03375 135 aaKnown RBP13.62□□□□□ -0.23
PHO4YFR034C YLR455WQ06188 304 aa13.62□□□□□ -0.23
PHO4YFR034C PMS1P14242 873 aa13.61□□□□□ -0.23
PHO4YFR034C YHR054CP38780 354 aa13.61□□□□□ -0.23
PHO4YFR034C VPS41P38959 992 aa13.61□□□□□ -0.23
PHO4YFR034C YJR079WP47126 109 aa13.61□□□□□ -0.23
PHO4YFR034C RPL22BP56628 122 aaKnown RBP13.61□□□□□ -0.23
PHO4YFR034C MRS2Q01926 470 aa13.61□□□□□ -0.23
PHO4YFR034C IVY1Q04934 453 aa13.61□□□□□ -0.23
PHO4YFR034C YOR223WQ12015 292 aa13.61□□□□□ -0.23
Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms