RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W UBC9P50623 157 aaPredicted RBP4.35□□□□□ -1.71
LOC1YFR001W SLI1P53304 468 aa4.35□□□□□ -1.71
LOC1YFR001W DOS2P54858 310 aa4.35□□□□□ -1.71
LOC1YFR001W DLT1Q04216 342 aa4.35□□□□□ -1.71
LOC1YFR001W RPN7Q06103 429 aaKnown RBP4.35□□□□□ -1.71
LOC1YFR001W ADR1P07248 1323 aa4.35□□□□□ -1.71
LOC1YFR001W MET3P08536 511 aa4.34□□□□□ -1.71
LOC1YFR001W CCR4P31384 837 aaKnown RBP4.34□□□□□ -1.71
LOC1YFR001W YKR018CP36114 725 aa4.34□□□□□ -1.71
LOC1YFR001W BRN1P38170 754 aa4.34□□□□□ -1.71
LOC1YFR001W MIP6P38760 659 aaKnown RBP4.34□□□□□ -1.71
LOC1YFR001W DOT6P40059 670 aaKnown RBP4.34□□□□□ -1.71
LOC1YFR001W MGS1P40151 587 aa4.34□□□□□ -1.71
LOC1YFR001W YJR142WP47173 342 aa4.34□□□□□ -1.71
LOC1YFR001W MUP1P50276 574 aa4.34□□□□□ -1.71
LOC1YFR001W TGL5Q12043 749 aa4.34□□□□□ -1.71
LOC1YFR001W CAF20P12962 161 aaKnown RBP4.33□□□□□ -1.72
LOC1YFR001W SPC42P36094 363 aa4.33□□□□□ -1.72
LOC1YFR001W SUL1P38359 859 aa4.33□□□□□ -1.72
LOC1YFR001W CHS7P38843 316 aa4.33□□□□□ -1.72
LOC1YFR001W ELO3P40319 345 aa4.33□□□□□ -1.72
LOC1YFR001W PRP31P49704 494 aaPredicted RBP4.33□□□□□ -1.72
LOC1YFR001W YBP2P53169 641 aa4.33□□□□□ -1.72
LOC1YFR001W SDA1P53313 767 aaKnown RBP4.33□□□□□ -1.72
LOC1YFR001W ORC4P54791 529 aa4.33□□□□□ -1.72
LOC1YFR001W RNT1Q02555 471 aa4.33□□□□□ -1.72
LOC1YFR001W GUD1Q07729 489 aa4.33□□□□□ -1.72
LOC1YFR001W YOL073CQ08232 322 aa4.33□□□□□ -1.72
LOC1YFR001W ALG7P07286 448 aa4.32□□□□□ -1.72
LOC1YFR001W YBR053CP38235 358 aa4.32□□□□□ -1.72
LOC1YFR001W ECM1P39715 212 aa4.32□□□□□ -1.72
LOC1YFR001W HLJ1P48353 224 aa4.32□□□□□ -1.72
LOC1YFR001W AMA1P50082 593 aa4.32□□□□□ -1.72
LOC1YFR001W PCL10P53124 433 aa4.32□□□□□ -1.72
LOC1YFR001W TEX1P53851 422 aaKnown RBP4.32□□□□□ -1.72
LOC1YFR001W FRE5Q08908 694 aa4.32□□□□□ -1.72
LOC1YFR001W PPR1P07272 904 aaPredicted RBP4.31□□□□□ -1.72
LOC1YFR001W ADE2P21264 571 aaKnown RBP4.31□□□□□ -1.72
LOC1YFR001W MNN4P36044 1178 aa4.31□□□□□ -1.72
LOC1YFR001W YIR042CP40586 236 aa4.31□□□□□ -1.72
LOC1YFR001W YNR029CP53729 429 aaKnown RBP4.31□□□□□ -1.72
LOC1YFR001W ARP4P80428 489 aa4.31□□□□□ -1.72
LOC1YFR001W ARG5,6Q01217 863 aa4.31□□□□□ -1.72
LOC1YFR001W YGR161W-CQ3E744 92 aa4.31□□□□□ -1.72
LOC1YFR001W TAD3Q9URQ3 322 aa4.31□□□□□ -1.72
LOC1YFR001W LAT1P12695 482 aaKnown RBP4.3□□□□□ -1.72
LOC1YFR001W YHR112CP38716 378 aa4.3□□□□□ -1.72
LOC1YFR001W CTF4Q01454 927 aa4.3□□□□□ -1.72
LOC1YFR001W LEE1Q02799 301 aaKnown RBP4.3□□□□□ -1.72
LOC1YFR001W GAD1Q04792 585 aa4.3□□□□□ -1.72
LOC1YFR001W ADY4Q05955 493 aa4.3□□□□□ -1.72
LOC1YFR001W THI73Q07904 523 aa4.3□□□□□ -1.72
LOC1YFR001W ATG11Q12527 1178 aa4.3□□□□□ -1.72
LOC1YFR001W APL2P36000 726 aaPredicted RBP4.29□□□□□ -1.72
LOC1YFR001W GID8P40208 455 aa4.29□□□□□ -1.72
LOC1YFR001W HOS4P40480 1083 aa4.29□□□□□ -1.72
LOC1YFR001W SSZ1P38788 538 aaKnown RBP4.28□□□□□ -1.72
LOC1YFR001W CRP1P38845 465 aaKnown RBP4.28□□□□□ -1.72
LOC1YFR001W CKB2P38930 258 aa4.28□□□□□ -1.72
LOC1YFR001W BAP3P41815 604 aa4.28□□□□□ -1.72
LOC1YFR001W YJL163CP46996 555 aa4.28□□□□□ -1.72
LOC1YFR001W YJR096WP47137 282 aa4.28□□□□□ -1.72
LOC1YFR001W BRE5P53741 515 aaKnown RBP4.28□□□□□ -1.72
LOC1YFR001W MCM21Q06675 368 aa4.28□□□□□ -1.72
LOC1YFR001W SSD1P24276 1250 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
LOC1YFR001W ERG6P25087 383 aaKnown RBP4.27□□□□□ -1.73
LOC1YFR001W TRZ1P36159 838 aaPredicted RBP4.27□□□□□ -1.73
LOC1YFR001W TYS1P36421 394 aaKnown RBP4.27□□□□□ -1.73
LOC1YFR001W APT2P36973 181 aa4.27□□□□□ -1.73
LOC1YFR001W PPS1P38148 807 aa4.27□□□□□ -1.73
LOC1YFR001W YJR039WP47107 1121 aa4.27□□□□□ -1.73
LOC1YFR001W PMT3P47190 753 aa4.27□□□□□ -1.73
LOC1YFR001W IRC13Q08630 104 aa4.27□□□□□ -1.73
LOC1YFR001W DCS2Q12123 353 aa4.27□□□□□ -1.73
LOC1YFR001W PRP19P32523 503 aaKnown RBP4.26□□□□□ -1.73
LOC1YFR001W AKL1P38080 1108 aaKnown RBP4.26□□□□□ -1.73
LOC1YFR001W BCD1P38772 366 aa4.26□□□□□ -1.73
LOC1YFR001W LYS9P38999 446 aa4.26□□□□□ -1.73
LOC1YFR001W SET2P46995 733 aaKnown RBP4.26□□□□□ -1.73
LOC1YFR001W MTL1P53214 551 aa4.26□□□□□ -1.73
LOC1YFR001W REC102Q02721 264 aa4.26□□□□□ -1.73
LOC1YFR001W UME1Q03010 460 aa4.26□□□□□ -1.73
LOC1YFR001W MTQ2Q03920 221 aaPredicted RBP4.26□□□□□ -1.73
LOC1YFR001W CTK1Q03957 528 aaKnown RBP4.26□□□□□ -1.73
LOC1YFR001W HMO1Q03973 246 aaKnown RBP4.26□□□□□ -1.73
LOC1YFR001W HRP1Q99383 534 aaKnown RBP4.26□□□□□ -1.73
LOC1YFR001W HIS7P33734 552 aaKnown RBP4.25□□□□□ -1.73
LOC1YFR001W OAR1P35731 278 aa4.25□□□□□ -1.73
LOC1YFR001W MAL31P38156 614 aa4.25□□□□□ -1.73
LOC1YFR001W APN2P38207 520 aa4.25□□□□□ -1.73
LOC1YFR001W UBC11P52492 156 aa4.25□□□□□ -1.73
LOC1YFR001W GPG1P53130 126 aa4.25□□□□□ -1.73
LOC1YFR001W GPD1Q00055 391 aaKnown RBP4.25□□□□□ -1.73
LOC1YFR001W YMR206WQ03695 313 aa4.25□□□□□ -1.73
LOC1YFR001W NUP145P49687 1317 aa4.24□□□□□ -1.73
LOC1YFR001W MOH1P38191 138 aa4.24□□□□□ -1.73
LOC1YFR001W TDA3P38758 523 aa4.24□□□□□ -1.73
LOC1YFR001W YHR202WP38887 602 aa4.24□□□□□ -1.73
LOC1YFR001W BEM4P39011 633 aa4.24□□□□□ -1.73
LOC1YFR001W NUG1P40010 520 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms