RNA–Protein interactions for RNA: YER038C

KRE29, Transcript of Subunit of the SMC5-SMC6 complex, yeast

Gene KRE29, Length 1,395 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KRE29	YER038C	SIZ1	Q04195	904 aa		4.87	□□□□□ -1.63
KRE29	YER038C	RBA50	Q04418	439 aa		4.87	□□□□□ -1.63
KRE29	YER038C	NCB2	Q92317	146 aa		4.87	□□□□□ -1.63
KRE29	YER038C	PMA1	P05030	918 aa	Known RBP	4.86	□□□□□ -1.63
KRE29	YER038C	RPL11A	P0C0W9	174 aa	Known RBP	4.86	□□□□□ -1.63
KRE29	YER038C	GRX7	P38068	203 aa		4.86	□□□□□ -1.63
KRE29	YER038C	SNF7	P39929	240 aa	Known RBP	4.86	□□□□□ -1.63
KRE29	YER038C	MXR1	P40029	184 aa		4.86	□□□□□ -1.63
KRE29	YER038C	MSE1	P48525	536 aa		4.86	□□□□□ -1.63
KRE29	YER038C	YGL242C	P53066	181 aa		4.86	□□□□□ -1.63
KRE29	YER038C	VPS72	Q03388	795 aa		4.86	□□□□□ -1.63
KRE29	YER038C	MSC2	Q03455	724 aa		4.86	□□□□□ -1.63
KRE29	YER038C	OYE2	Q03558	400 aa	Known RBP	4.86	□□□□□ -1.63
KRE29	YER038C	PUS9	Q12069	462 aa		4.86	□□□□□ -1.63
KRE29	YER038C	RIB2	Q12362	591 aa	Known RBP	4.86	□□□□□ -1.63
KRE29	YER038C	RPL11B	Q3E757	174 aa	Predicted RBP	4.86	□□□□□ -1.63
KRE29	YER038C	CYB2	P00175	591 aa		4.85	□□□□□ -1.63
KRE29	YER038C	LST4	P34239	828 aa		4.85	□□□□□ -1.63
KRE29	YER038C	YBL028C	P38202	106 aa		4.85	□□□□□ -1.63
KRE29	YER038C	SUB1	P54000	292 aa	Known RBP	4.85	□□□□□ -1.63
KRE29	YER038C	YAP6	Q03935	383 aa		4.85	□□□□□ -1.63
KRE29	YER038C	YLR224W	Q05947	369 aa		4.85	□□□□□ -1.63
KRE29	YER038C	NOP12	Q08208	459 aa	Known RBP	4.85	□□□□□ -1.63
KRE29	YER038C	PPM2	Q08282	695 aa		4.85	□□□□□ -1.63
KRE29	YER038C	PCL8	Q08966	492 aa		4.85	□□□□□ -1.63
KRE29	YER038C	BI4	P03879	638 aa		4.84	□□□□□ -1.63
KRE29	YER038C	ENA1	P13587	1091 aa		4.84	□□□□□ -1.63
KRE29	YER038C	EMC1	P25574	760 aa		4.84	□□□□□ -1.63
KRE29	YER038C	DUT1	P33317	147 aa		4.84	□□□□□ -1.63
KRE29	YER038C	POA1	P38218	177 aa		4.84	□□□□□ -1.63
KRE29	YER038C	IOC3	P43596	787 aa		4.84	□□□□□ -1.63
KRE29	YER038C	GCV2	P49095	1034 aa		4.84	□□□□□ -1.63
KRE29	YER038C	PIP2	P52960	996 aa		4.84	□□□□□ -1.63
KRE29	YER038C	VPS62	P53285	467 aa		4.84	□□□□□ -1.63
KRE29	YER038C	ENA2	Q01896	1091 aa		4.84	□□□□□ -1.63
KRE29	YER038C	ENA5	Q12691	1091 aa		4.84	□□□□□ -1.63
KRE29	YER038C	NOT3	P06102	836 aa	Known RBP	4.83	□□□□□ -1.64
KRE29	YER038C	DBP2	P24783	546 aa	Known RBP	4.83	□□□□□ -1.64
KRE29	YER038C	PMI40	P29952	429 aa	Known RBP	4.83	□□□□□ -1.64
KRE29	YER038C	LYP1	P32487	611 aa		4.83	□□□□□ -1.64
KRE29	YER038C	NMD2	P38798	1089 aa	Known RBP	4.83	□□□□□ -1.64
KRE29	YER038C	ACA1	P39970	489 aa		4.83	□□□□□ -1.64
KRE29	YER038C	ZRG8	P40021	1076 aa		4.83	□□□□□ -1.64
KRE29	YER038C	MLC1	P53141	149 aa		4.83	□□□□□ -1.64
KRE29	YER038C	GIS1	Q03833	894 aa		4.83	□□□□□ -1.64
KRE29	YER038C	NTO1	Q12311	748 aa		4.83	□□□□□ -1.64
KRE29	YER038C	PDR18	P53756	1333 aa		4.83	□□□□□ -1.64
KRE29	YER038C	TRP2	P00899	507 aa	Known RBP	4.82	□□□□□ -1.64
KRE29	YER038C	CDC34	P14682	295 aa		4.82	□□□□□ -1.64
KRE29	YER038C	PET112	P33893	541 aa		4.82	□□□□□ -1.64
KRE29	YER038C	AIM21	P40563	679 aa		4.82	□□□□□ -1.64
KRE29	YER038C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
KRE29	YER038C	RTS3	P53289	263 aa		4.82	□□□□□ -1.64
KRE29	YER038C	YDL124W	Q07551	312 aa	Known RBP	4.82	□□□□□ -1.64
KRE29	YER038C	KEL3	Q08979	651 aa	Predicted RBP	4.82	□□□□□ -1.64
KRE29	YER038C	HMI1	Q12039	706 aa		4.82	□□□□□ -1.64
KRE29	YER038C	OSW2	Q12202	724 aa		4.82	□□□□□ -1.64
KRE29	YER038C	VPS13	Q07878	3144 aa		4.82	□□□□□ -1.64
KRE29	YER038C	CDC6	P09119	513 aa		4.81	□□□□□ -1.64
KRE29	YER038C	SLA2	P33338	968 aa		4.81	□□□□□ -1.64
KRE29	YER038C	OCT1	P35999	772 aa		4.81	□□□□□ -1.64
KRE29	YER038C	ECM21	P38167	1117 aa	Known RBP	4.81	□□□□□ -1.64
KRE29	YER038C	ERG7	P38604	731 aa		4.81	□□□□□ -1.64
KRE29	YER038C	YMR147W	P40218	223 aa	Known RBP	4.81	□□□□□ -1.64
KRE29	YER038C	NET1	P47035	1189 aa		4.81	□□□□□ -1.64
KRE29	YER038C	TYW3	P53177	273 aa		4.81	□□□□□ -1.64
KRE29	YER038C	SPO20	Q04359	397 aa		4.81	□□□□□ -1.64
KRE29	YER038C	YLR225C	Q05948	407 aa	Known RBP	4.81	□□□□□ -1.64
KRE29	YER038C	FBP1	P09201	348 aa		4.8	□□□□□ -1.64
KRE29	YER038C	PAM1	P37304	830 aa	Known RBP	4.8	□□□□□ -1.64
KRE29	YER038C	BRN1	P38170	754 aa		4.8	□□□□□ -1.64
KRE29	YER038C	PBY1	P38254	753 aa		4.8	□□□□□ -1.64
KRE29	YER038C	MND2	P40577	368 aa		4.8	□□□□□ -1.64
KRE29	YER038C	IRC8	P47046	822 aa		4.8	□□□□□ -1.64
KRE29	YER038C	PIB2	P53191	635 aa		4.8	□□□□□ -1.64
KRE29	YER038C	EEB1	Q02891	456 aa		4.8	□□□□□ -1.64
KRE29	YER038C	TPO1	Q07824	586 aa		4.8	□□□□□ -1.64
KRE29	YER038C	RKM4	Q12504	494 aa		4.8	□□□□□ -1.64
KRE29	YER038C	INO1	P11986	533 aa		4.79	□□□□□ -1.64
KRE29	YER038C	YKL107W	P34251	309 aa		4.79	□□□□□ -1.64
KRE29	YER038C	MNR2	P35724	969 aa		4.79	□□□□□ -1.64
KRE29	YER038C	MCD4	P36051	919 aa		4.79	□□□□□ -1.64
KRE29	YER038C	CST26	P38226	397 aa		4.79	□□□□□ -1.64
KRE29	YER038C	PLB1	P39105	664 aa		4.79	□□□□□ -1.64
KRE29	YER038C	LYS14	P40971	790 aa		4.79	□□□□□ -1.64
KRE29	YER038C	MET12	P46151	657 aa		4.79	□□□□□ -1.64
KRE29	YER038C	PSP2	P50109	593 aa	Known RBP	4.79	□□□□□ -1.64
KRE29	YER038C	HFM1	P51979	1187 aa		4.79	□□□□□ -1.64
KRE29	YER038C	MRPS35	P53292	345 aa		4.79	□□□□□ -1.64
KRE29	YER038C	TLG1	Q03322	224 aa		4.79	□□□□□ -1.64
KRE29	YER038C	CFT2	Q12102	859 aa	Predicted RBP	4.79	□□□□□ -1.64
KRE29	YER038C	KRS1	P15180	591 aa	Known RBP	4.78	□□□□□ -1.64
KRE29	YER038C	PRE8	P23639	250 aa		4.78	□□□□□ -1.64
KRE29	YER038C	TIF4631	P39935	952 aa	Known RBP	4.78	□□□□□ -1.64
KRE29	YER038C	VAB2	P40003	282 aa		4.78	□□□□□ -1.64
KRE29	YER038C	ENP2	P48234	707 aa	Known RBP	4.78	□□□□□ -1.64
KRE29	YER038C	PHO23	P50947	330 aa		4.78	□□□□□ -1.64
KRE29	YER038C	SUN4	P53616	420 aa		4.78	□□□□□ -1.64
KRE29	YER038C	TAH18	Q12181	623 aa		4.78	□□□□□ -1.64
KRE29	YER038C	YPL066W	Q12194	479 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 43.4 ms