RNA–Protein interactions for RNA: YDR302W

GPI11, Transcript of ER membrane protein involved in a late step of GPI anchor assembly, yeast

Gene GPI11, Length 660 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GPI11	YDR302W	YNL144C	P53907	740 aa		6.58	□□□□□ -1.36
GPI11	YDR302W	HPC2	Q01448	625 aa		6.58	□□□□□ -1.36
GPI11	YDR302W	FOX2	Q02207	900 aa	Known RBP	6.58	□□□□□ -1.36
GPI11	YDR302W	UTP6	Q02354	440 aa	Known RBP	6.58	□□□□□ -1.36
GPI11	YDR302W	RAT1	Q02792	1006 aa	Known RBP	6.58	□□□□□ -1.36
GPI11	YDR302W	FUS2	Q05670	677 aa		6.58	□□□□□ -1.36
GPI11	YDR302W	YPL260W	Q08977	551 aa		6.58	□□□□□ -1.36
GPI11	YDR302W	FAL1	Q12099	399 aa	Known RBP	6.58	□□□□□ -1.36
GPI11	YDR302W	FLO1	P32768	1537 aa		6.58	□□□□□ -1.36
GPI11	YDR302W	YLR462W	O13556	202 aa		6.57	□□□□□ -1.36
GPI11	YDR302W	ILV2	P07342	687 aa	Known RBP	6.57	□□□□□ -1.36
GPI11	YDR302W	CLN3	P13365	580 aa		6.57	□□□□□ -1.36
GPI11	YDR302W	POL3	P15436	1097 aa		6.57	□□□□□ -1.36
GPI11	YDR302W	RPL8B	P29453	256 aa	Known RBP	6.57	□□□□□ -1.36
GPI11	YDR302W	SIN4	P32259	974 aa		6.57	□□□□□ -1.36
GPI11	YDR302W	YHL049C	P38722	271 aa		6.57	□□□□□ -1.36
GPI11	YDR302W	PES4	P39684	611 aa		6.57	□□□□□ -1.36
GPI11	YDR302W	YEL075C	P39972	122 aa		6.57	□□□□□ -1.36
GPI11	YDR302W	YER189W	P40104	122 aa		6.57	□□□□□ -1.36
GPI11	YDR302W	DOT5	P40553	215 aa		6.57	□□□□□ -1.36
GPI11	YDR302W	IAH1	P41734	238 aa		6.57	□□□□□ -1.36
GPI11	YDR302W	YFL064C	P43540	174 aa		6.57	□□□□□ -1.36
GPI11	YDR302W	CIT3	P43635	486 aa		6.57	□□□□□ -1.36
GPI11	YDR302W	ESBP6	P53918	673 aa		6.57	□□□□□ -1.36
GPI11	YDR302W	BET4	Q00618	327 aa		6.57	□□□□□ -1.36
GPI11	YDR302W	SYF1	Q04048	859 aa	Predicted RBP	6.57	□□□□□ -1.36
GPI11	YDR302W	ORM2	Q06144	216 aa		6.57	□□□□□ -1.36
GPI11	YDR302W	PSF3	Q12146	194 aa		6.57	□□□□□ -1.36
GPI11	YDR302W	MED1	Q12321	566 aa		6.57	□□□□□ -1.36
GPI11	YDR302W	YBL111C	Q3E7Y5	667 aa		6.57	□□□□□ -1.36
GPI11	YDR302W	SNA3	P14359	133 aa		6.56	□□□□□ -1.36
GPI11	YDR302W	ADE2	P21264	571 aa	Known RBP	6.56	□□□□□ -1.36
GPI11	YDR302W	PWP1	P21304	576 aa	Known RBP	6.56	□□□□□ -1.36
GPI11	YDR302W	PUP2	P32379	260 aa		6.56	□□□□□ -1.36
GPI11	YDR302W	GCD6	P32501	712 aa	Known RBP	6.56	□□□□□ -1.36
GPI11	YDR302W	PRP40	P33203	583 aa	Known RBP	6.56	□□□□□ -1.36
GPI11	YDR302W	TRM2	P33753	639 aa		6.56	□□□□□ -1.36
GPI11	YDR302W	VPS35	P34110	944 aa		6.56	□□□□□ -1.36
GPI11	YDR302W	YBL055C	P34220	418 aa	Predicted RBP	6.56	□□□□□ -1.36
GPI11	YDR302W	RPC37	P36121	282 aa		6.56	□□□□□ -1.36
GPI11	YDR302W	ECM2	P38241	364 aa	Known RBP	6.56	□□□□□ -1.36
GPI11	YDR302W	EMW1	P42842	904 aa	Known RBP	6.56	□□□□□ -1.36
GPI11	YDR302W	BNI5	P53890	448 aa	Known RBP	6.56	□□□□□ -1.36
GPI11	YDR302W	ALD6	P54115	500 aa	Known RBP	6.56	□□□□□ -1.36
GPI11	YDR302W	YKU80	Q04437	629 aa		6.56	□□□□□ -1.36
GPI11	YDR302W	HFD1	Q04458	532 aa		6.56	□□□□□ -1.36
GPI11	YDR302W	CSM3	Q04659	317 aa		6.56	□□□□□ -1.36
GPI11	YDR302W	YLR297W	Q05899	129 aa		6.56	□□□□□ -1.36
GPI11	YDR302W	SMD2	Q06217	110 aa	Known RBP	6.56	□□□□□ -1.36
GPI11	YDR302W	RAD59	Q12223	238 aa		6.56	□□□□□ -1.36
GPI11	YDR302W	YML002W	P0CF17	737 aa		6.55	□□□□□ -1.36
GPI11	YDR302W	HEM15	P16622	393 aa		6.55	□□□□□ -1.36
GPI11	YDR302W	CAP1	P28495	268 aa	Known RBP	6.55	□□□□□ -1.36
GPI11	YDR302W	TRK2	P28584	889 aa		6.55	□□□□□ -1.36
GPI11	YDR302W	TFC4	P33339	1025 aa		6.55	□□□□□ -1.36
GPI11	YDR302W	TIF5	P38431	405 aa	Known RBP	6.55	□□□□□ -1.36
GPI11	YDR302W	END3	P39013	349 aa		6.55	□□□□□ -1.36
GPI11	YDR302W	UBP6	P43593	499 aa	Known RBP	6.55	□□□□□ -1.36
GPI11	YDR302W	MSN5	P52918	1224 aa		6.55	□□□□□ -1.36
GPI11	YDR302W	NBP1	P52919	319 aa	Predicted RBP	6.55	□□□□□ -1.36
GPI11	YDR302W	PIP2	P52960	996 aa		6.55	□□□□□ -1.36
GPI11	YDR302W	VID30	P53076	958 aa		6.55	□□□□□ -1.36
GPI11	YDR302W	UBP2	Q01476	1272 aa		6.55	□□□□□ -1.36
GPI11	YDR302W	IRC4	Q03036	179 aa		6.55	□□□□□ -1.36
GPI11	YDR302W	BUL2	Q03758	920 aa	Known RBP	6.55	□□□□□ -1.36
GPI11	YDR302W	GTB1	Q04924	702 aa		6.55	□□□□□ -1.36
GPI11	YDR302W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	6.55	□□□□□ -1.36	not detected
GPI11	YDR302W	TY1A-BL	Q12266	440 aa		6.55	□□□□□ -1.36
GPI11	YDR302W	YVC1	Q12324	675 aa		6.55	□□□□□ -1.36
GPI11	YDR302W	NAT1	P12945	854 aa	Known RBP	6.54	□□□□□ -1.36
GPI11	YDR302W	REC107	P21651	314 aa		6.54	□□□□□ -1.36
GPI11	YDR302W	SRO9	P25567	434 aa	Known RBP	6.54	□□□□□ -1.36
GPI11	YDR302W	SEC21	P32074	935 aa	Known RBP	6.54	□□□□□ -1.36
GPI11	YDR302W	FRD1	P32614	470 aa	Known RBP	6.54	□□□□□ -1.36
GPI11	YDR302W	YKL050C	P35736	922 aa		6.54	□□□□□ -1.36
GPI11	YDR302W	PPS1	P38148	807 aa		6.54	□□□□□ -1.36
GPI11	YDR302W	SPC72	P39723	622 aa		6.54	□□□□□ -1.36
GPI11	YDR302W	PSY2	P40164	858 aa		6.54	□□□□□ -1.36
GPI11	YDR302W	ALG5	P40350	334 aa		6.54	□□□□□ -1.36
GPI11	YDR302W	YIR007W	P40566	764 aa		6.54	□□□□□ -1.36
GPI11	YDR302W	GCN20	P43535	752 aa	Known RBP	6.54	□□□□□ -1.36
GPI11	YDR302W	BRO1	P48582	844 aa		6.54	□□□□□ -1.36
GPI11	YDR302W	GUP1	P53154	560 aa		6.54	□□□□□ -1.36
GPI11	YDR302W	JJJ1	P53863	590 aa		6.54	□□□□□ -1.36
GPI11	YDR302W	ARO80	Q04052	950 aa		6.54	□□□□□ -1.36
GPI11	YDR302W	YDL057W	Q07379	328 aa		6.54	□□□□□ -1.36
GPI11	YDR302W	BDF2	Q07442	638 aa		6.54	□□□□□ -1.36
GPI11	YDR302W	SLP1	Q12232	587 aa		6.54	□□□□□ -1.36
GPI11	YDR302W	SNF1	P06782	633 aa	Known RBP	6.53	□□□□□ -1.36
GPI11	YDR302W	ADE3	P07245	946 aa	Known RBP	6.53	□□□□□ -1.36
GPI11	YDR302W	TEC1	P18412	486 aa		6.53	□□□□□ -1.36
GPI11	YDR302W	TYR1	P20049	452 aa		6.53	□□□□□ -1.36
GPI11	YDR302W	KRE2	P27809	442 aa		6.53	□□□□□ -1.36
GPI11	YDR302W	MLS1	P30952	554 aa		6.53	□□□□□ -1.36
GPI11	YDR302W	RAD16	P31244	790 aa		6.53	□□□□□ -1.36
GPI11	YDR302W	VPH2	P32341	215 aa		6.53	□□□□□ -1.36
GPI11	YDR302W	SSE1	P32589	693 aa	Known RBP	6.53	□□□□□ -1.36
GPI11	YDR302W	MDL2	P33311	773 aa		6.53	□□□□□ -1.36
GPI11	YDR302W	MKS1	P34072	584 aa		6.53	□□□□□ -1.36
GPI11	YDR302W	LHS1	P36016	881 aa		6.53	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 72.3 ms