RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	MAL31	P38156	614 aa		5.88	□□□□□ -1.47
NSE3	YDR288W	MIP6	P38760	659 aa	Known RBP	5.88	□□□□□ -1.47
NSE3	YDR288W	GZF3	P42944	551 aa	Known RBP	5.88	□□□□□ -1.47
NSE3	YDR288W	RET2	P43621	546 aa		5.88	□□□□□ -1.47
NSE3	YDR288W	PRP31	P49704	494 aa	Predicted RBP	5.88	□□□□□ -1.47
NSE3	YDR288W	EXG2	P52911	562 aa		5.88	□□□□□ -1.47
NSE3	YDR288W	ASM4	Q05166	528 aa		5.88	□□□□□ -1.47
NSE3	YDR288W	YBR259W	P38338	688 aa		5.87	□□□□□ -1.47
NSE3	YDR288W	IRC24	P40580	263 aa		5.87	□□□□□ -1.47
NSE3	YDR288W	NRG1	Q03125	231 aa		5.87	□□□□□ -1.47
NSE3	YDR288W	CLU1	Q03690	1277 aa	Known RBP	5.87	□□□□□ -1.47
NSE3	YDR288W	ENB1	Q08299	606 aa		5.87	□□□□□ -1.47
NSE3	YDR288W	PRP4	P20053	465 aa	Known RBP	5.86	□□□□□ -1.47
NSE3	YDR288W	CTF13	P35203	478 aa		5.86	□□□□□ -1.47
NSE3	YDR288W	APT2	P36973	181 aa		5.86	□□□□□ -1.47
NSE3	YDR288W	TMA17	Q12513	150 aa		5.86	□□□□□ -1.47
NSE3	YDR288W	DID4	P36108	232 aa		5.85	□□□□□ -1.47
NSE3	YDR288W	OAF1	P39720	1047 aa	Predicted RBP	5.85	□□□□□ -1.47
NSE3	YDR288W	FKH2	P41813	862 aa		5.85	□□□□□ -1.47
NSE3	YDR288W	SLU7	Q02775	382 aa	Known RBP	5.85	□□□□□ -1.47
NSE3	YDR288W	TRE2	Q08693	809 aa		5.85	□□□□□ -1.47
NSE3	YDR288W	MRC1	P25588	1096 aa		5.84	□□□□□ -1.47
NSE3	YDR288W	MNN11	P46985	422 aa	Known RBP	5.84	□□□□□ -1.47
NSE3	YDR288W	FOL1	P53848	824 aa		5.84	□□□□□ -1.47
NSE3	YDR288W	HCM1	P25364	564 aa		5.83	□□□□□ -1.48
NSE3	YDR288W	DCG1	P32460	244 aa		5.83	□□□□□ -1.48
NSE3	YDR288W	APN2	P38207	520 aa		5.83	□□□□□ -1.48
NSE3	YDR288W	SSZ1	P38788	538 aa	Known RBP	5.83	□□□□□ -1.48
NSE3	YDR288W	CCT5	P40413	562 aa	Known RBP	5.83	□□□□□ -1.48
NSE3	YDR288W	YHM2	Q04013	314 aa		5.83	□□□□□ -1.48
NSE3	YDR288W	IOC4	Q04213	475 aa		5.83	□□□□□ -1.48
NSE3	YDR288W	GAD1	Q04792	585 aa		5.83	□□□□□ -1.48
NSE3	YDR288W	AIM39	Q08223	395 aa		5.83	□□□□□ -1.48
NSE3	YDR288W	GPR1	Q12361	961 aa		5.83	□□□□□ -1.48
NSE3	YDR288W	MET3	P08536	511 aa		5.82	□□□□□ -1.48
NSE3	YDR288W	EUG1	P32474	517 aa		5.82	□□□□□ -1.48
NSE3	YDR288W	SHM2	P37291	469 aa	Known RBP	5.82	□□□□□ -1.48
NSE3	YDR288W	SIC1	P38634	284 aa		5.82	□□□□□ -1.48
NSE3	YDR288W	YHR202W	P38887	602 aa		5.82	□□□□□ -1.48
NSE3	YDR288W	SET2	P46995	733 aa	Known RBP	5.82	□□□□□ -1.48
NSE3	YDR288W	YJR039W	P47107	1121 aa		5.82	□□□□□ -1.48
NSE3	YDR288W	ARP4	P80428	489 aa		5.82	□□□□□ -1.48
NSE3	YDR288W	PTA1	Q01329	785 aa	Predicted RBP	5.82	□□□□□ -1.48
NSE3	YDR288W	DCS2	Q12123	353 aa		5.82	□□□□□ -1.48
NSE3	YDR288W	TRP4	P07285	380 aa	Predicted RBP	5.81	□□□□□ -1.48
NSE3	YDR288W	ADE2	P21264	571 aa	Known RBP	5.81	□□□□□ -1.48
NSE3	YDR288W	PAF1	P38351	445 aa		5.81	□□□□□ -1.48
NSE3	YDR288W	YJR120W	P47157	116 aa		5.81	□□□□□ -1.48
NSE3	YDR288W	COX18	P53239	316 aa		5.81	□□□□□ -1.48
NSE3	YDR288W	BRE5	P53741	515 aa	Known RBP	5.81	□□□□□ -1.48
NSE3	YDR288W	ECM9	Q02202	377 aa		5.81	□□□□□ -1.48
NSE3	YDR288W	REC102	Q02721	264 aa		5.81	□□□□□ -1.48
NSE3	YDR288W	DLT1	Q04216	342 aa		5.81	□□□□□ -1.48
NSE3	YDR288W	RMP1	Q12530	201 aa		5.81	□□□□□ -1.48
NSE3	YDR288W	CAF20	P12962	161 aa	Known RBP	5.8	□□□□□ -1.48
NSE3	YDR288W	CTS1	P29029	562 aa		5.8	□□□□□ -1.48
NSE3	YDR288W	APL2	P36000	726 aa	Predicted RBP	5.8	□□□□□ -1.48
NSE3	YDR288W	TRZ1	P36159	838 aa	Predicted RBP	5.8	□□□□□ -1.48
NSE3	YDR288W	YBR071W	P38243	211 aa		5.8	□□□□□ -1.48
NSE3	YDR288W	ECM1	P39715	212 aa		5.8	□□□□□ -1.48
NSE3	YDR288W	DUG1	P43616	481 aa	Known RBP	5.8	□□□□□ -1.48
NSE3	YDR288W	PHO23	P50947	330 aa		5.8	□□□□□ -1.48
NSE3	YDR288W	ARG5,6	Q01217	863 aa		5.8	□□□□□ -1.48
NSE3	YDR288W	YMR210W	Q03649	449 aa		5.8	□□□□□ -1.48
NSE3	YDR288W	ESC8	Q08119	714 aa		5.8	□□□□□ -1.48
NSE3	YDR288W	TGL5	Q12043	749 aa		5.8	□□□□□ -1.48
NSE3	YDR288W	LAS17	Q12446	633 aa		5.8	□□□□□ -1.48
NSE3	YDR288W	PMA1	P05030	918 aa	Known RBP	5.79	□□□□□ -1.48
NSE3	YDR288W	AEP2	P22136	580 aa		5.79	□□□□□ -1.48
NSE3	YDR288W	SEC65	P29478	273 aa		5.79	□□□□□ -1.48
NSE3	YDR288W	GRX7	P38068	203 aa		5.79	□□□□□ -1.48
NSE3	YDR288W	AMA1	P50082	593 aa		5.79	□□□□□ -1.48
NSE3	YDR288W	MRPS35	P53292	345 aa		5.79	□□□□□ -1.48
NSE3	YDR288W	LEE1	Q02799	301 aa	Known RBP	5.79	□□□□□ -1.48
NSE3	YDR288W	CTK1	Q03957	528 aa	Known RBP	5.79	□□□□□ -1.48
NSE3	YDR288W	MCM21	Q06675	368 aa		5.79	□□□□□ -1.48
NSE3	YDR288W	ISA1	Q07821	250 aa	Predicted RBP	5.79	□□□□□ -1.48
NSE3	YDR288W	PYC1	P11154	1178 aa	Known RBP	5.78	□□□□□ -1.48
NSE3	YDR288W	AKL1	P38080	1108 aa	Known RBP	5.78	□□□□□ -1.48
NSE3	YDR288W	YHR112C	P38716	378 aa		5.78	□□□□□ -1.48
NSE3	YDR288W	YIR042C	P40586	236 aa		5.78	□□□□□ -1.48
NSE3	YDR288W	URN1	Q06525	465 aa	Known RBP	5.78	□□□□□ -1.48
NSE3	YDR288W	SGO1	Q08490	590 aa		5.78	□□□□□ -1.48
NSE3	YDR288W	RPS21B	Q3E754	87 aa	Known RBP	5.78	□□□□□ -1.48
NSE3	YDR288W	HRR25	P29295	494 aa	Known RBP	5.77	□□□□□ -1.49
NSE3	YDR288W	EFT1	P32324	842 aa	Known RBP	5.77	□□□□□ -1.49
NSE3	YDR288W	NUG1	P40010	520 aa	Known RBP	5.77	□□□□□ -1.49
NSE3	YDR288W	ELO3	P40319	345 aa		5.77	□□□□□ -1.49
NSE3	YDR288W	MUP1	P50276	574 aa		5.77	□□□□□ -1.49
NSE3	YDR288W	PEX14	P53112	341 aa		5.77	□□□□□ -1.49
NSE3	YDR288W	TEX1	P53851	422 aa	Known RBP	5.77	□□□□□ -1.49
NSE3	YDR288W	YLR407W	Q06070	228 aa		5.77	□□□□□ -1.49
NSE3	YDR288W	VHS3	Q08438	674 aa		5.77	□□□□□ -1.49
NSE3	YDR288W	NTO1	Q12311	748 aa		5.77	□□□□□ -1.49
NSE3	YDR288W	HXT6	P39003	570 aa	Known RBP	5.76	□□□□□ -1.49
NSE3	YDR288W	HXT7	P39004	570 aa		5.76	□□□□□ -1.49
NSE3	YDR288W	SPC105	P53148	917 aa		5.76	□□□□□ -1.49
NSE3	YDR288W	ERG5	P54781	538 aa		5.76	□□□□□ -1.49
NSE3	YDR288W	DIA2	Q08496	732 aa	Predicted RBP	5.76	□□□□□ -1.49
NSE3	YDR288W	HFI1	Q12060	488 aa		5.76	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms