RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC2YDR180W HTZ1Q12692 134 aaKnown RBP1.15□□□□□ -2.23
SCC2YDR180W SSK22P25390 1331 aaPredicted RBP1.15□□□□□ -2.23
SCC2YDR180W CDC9P04819 755 aa1.15□□□□□ -2.23
SCC2YDR180W RAP1P11938 827 aa1.15□□□□□ -2.23
SCC2YDR180W GLN4P13188 809 aaKnown RBP1.15□□□□□ -2.23
SCC2YDR180W TUP1P16649 713 aa1.15□□□□□ -2.23
SCC2YDR180W PHO13P19881 312 aa1.15□□□□□ -2.23
SCC2YDR180W VMA4P22203 233 aaKnown RBP1.15□□□□□ -2.23
SCC2YDR180W PHO84P25297 587 aaKnown RBP1.15□□□□□ -2.23
SCC2YDR180W PWP2P25635 923 aaKnown RBP1.15□□□□□ -2.23
SCC2YDR180W MTC2P34246 357 aa1.15□□□□□ -2.23
SCC2YDR180W YKL107WP34251 309 aa1.15□□□□□ -2.23
SCC2YDR180W SPT23P35210 1082 aa1.15□□□□□ -2.23
SCC2YDR180W EXO84P38261 753 aa1.15□□□□□ -2.23
SCC2YDR180W YNL320WP42840 284 aa1.15□□□□□ -2.23
SCC2YDR180W VPS53P47061 822 aa1.15□□□□□ -2.23
SCC2YDR180W YJR096WP47137 282 aa1.15□□□□□ -2.23
SCC2YDR180W SHE10P53075 577 aa1.15□□□□□ -2.23
SCC2YDR180W UTP22P53254 1237 aaPredicted RBP1.15□□□□□ -2.23
SCC2YDR180W BSC5P53755 489 aa1.15□□□□□ -2.23
SCC2YDR180W NGL3Q03210 505 aa1.15□□□□□ -2.23
SCC2YDR180W VMS1Q04311 632 aaKnown RBP1.15□□□□□ -2.23
SCC2YDR180W YLR407WQ06070 228 aa1.15□□□□□ -2.23
SCC2YDR180W YSH1Q06224 779 aaPredicted RBP1.15□□□□□ -2.23
SCC2YDR180W GIC2Q06648 383 aa1.15□□□□□ -2.23
SCC2YDR180W TRE1Q08919 783 aa1.15□□□□□ -2.23
SCC2YDR180W SWI1P09547 1314 aa1.15□□□□□ -2.23
SCC2YDR180W YPR089WO13585 888 aa1.15□□□□□ -2.23
SCC2YDR180W HIS3P06633 220 aa1.15□□□□□ -2.23
SCC2YDR180W FUS1P11710 512 aa1.15□□□□□ -2.23
SCC2YDR180W RAD53P22216 821 aa1.15□□□□□ -2.23
SCC2YDR180W GFD2P25370 566 aaKnown RBP1.15□□□□□ -2.23
SCC2YDR180W MCM4P30665 933 aaKnown RBP1.15□□□□□ -2.23
SCC2YDR180W KAR9P32526 644 aa1.15□□□□□ -2.23
SCC2YDR180W GCG1P32656 232 aaKnown RBP1.15□□□□□ -2.23
SCC2YDR180W MRS6P32864 603 aaKnown RBP1.15□□□□□ -2.23
SCC2YDR180W DOM34P33309 386 aa1.15□□□□□ -2.23
SCC2YDR180W VRP1P37370 817 aa1.15□□□□□ -2.23
SCC2YDR180W YRO2P38079 344 aa1.15□□□□□ -2.23
SCC2YDR180W RDH54P38086 958 aa1.15□□□□□ -2.23
SCC2YDR180W YBL086CP38177 466 aa1.15□□□□□ -2.23
SCC2YDR180W YBR071WP38243 211 aa1.15□□□□□ -2.23
SCC2YDR180W YBR238CP38330 731 aaKnown RBP1.15□□□□□ -2.23
SCC2YDR180W RFC1P38630 861 aaKnown RBP1.15□□□□□ -2.23
SCC2YDR180W ERC1P38767 581 aa1.15□□□□□ -2.23
SCC2YDR180W RIX1P38883 763 aaPredicted RBP1.15□□□□□ -2.23
SCC2YDR180W GPB2P39717 880 aa1.15□□□□□ -2.23
SCC2YDR180W SDS3P40505 327 aa1.15□□□□□ -2.23
SCC2YDR180W SYG1P40528 902 aa1.15□□□□□ -2.23
SCC2YDR180W JJJ2P46997 583 aa1.15□□□□□ -2.23
SCC2YDR180W PMT3P47190 753 aa1.15□□□□□ -2.23
SCC2YDR180W GNP1P48813 663 aa1.15□□□□□ -2.23
SCC2YDR180W ATP22P50273 684 aaPredicted RBP1.15□□□□□ -2.23
SCC2YDR180W TAD1P53065 400 aa1.15□□□□□ -2.23
SCC2YDR180W MET13P53128 600 aa1.15□□□□□ -2.23
SCC2YDR180W SPC105P53148 917 aa1.15□□□□□ -2.23
SCC2YDR180W EST2Q06163 884 aa1.15□□□□□ -2.23
SCC2YDR180W TMA10Q06177 86 aa1.15□□□□□ -2.23
SCC2YDR180W VAM6Q07468 1049 aa1.15□□□□□ -2.23
SCC2YDR180W NBA1Q08229 501 aaKnown RBP1.15□□□□□ -2.23
SCC2YDR180W HMI1Q12039 706 aa1.15□□□□□ -2.23
SCC2YDR180W GNT1Q12096 491 aa1.15□□□□□ -2.23
SCC2YDR180W YRM1Q12340 786 aa1.15□□□□□ -2.23
SCC2YDR180W RPP2BP02400 110 aaKnown RBP1.14□□□□□ -2.23
SCC2YDR180W BI2P03873 423 aa1.14□□□□□ -2.23
SCC2YDR180W GAL1P04385 528 aa1.14□□□□□ -2.23
SCC2YDR180W PGI1P12709 554 aaKnown RBP1.14□□□□□ -2.23
SCC2YDR180W HSP30P25619 332 aa1.14□□□□□ -2.23
SCC2YDR180W SBA1P28707 216 aaKnown RBP1.14□□□□□ -2.23
SCC2YDR180W UIP5P36137 443 aa1.14□□□□□ -2.23
SCC2YDR180W AHP1P38013 176 aaKnown RBP1.14□□□□□ -2.23
SCC2YDR180W RFT1P38206 574 aaPredicted RBP1.14□□□□□ -2.23
SCC2YDR180W OSH3P38713 996 aaKnown RBP1.14□□□□□ -2.23
SCC2YDR180W TCD1P38756 429 aa1.14□□□□□ -2.23
SCC2YDR180W SAK1P38990 1142 aa1.14□□□□□ -2.23
SCC2YDR180W YER156CP40093 338 aaKnown RBP1.14□□□□□ -2.23
SCC2YDR180W BPL1P48445 690 aaPredicted RBP1.14□□□□□ -2.23
SCC2YDR180W YGR012WP53206 393 aa1.14□□□□□ -2.23
SCC2YDR180W YGR021WP53212 290 aa1.14□□□□□ -2.23
SCC2YDR180W TGL2P54857 326 aa1.14□□□□□ -2.23
SCC2YDR180W NPL3Q01560 414 aaKnown RBP RIP-Chip data1.14□□□□□ -2.23not detected
SCC2YDR180W MUB1Q03162 620 aa1.14□□□□□ -2.23
SCC2YDR180W CEF1Q03654 590 aaPredicted RBP1.14□□□□□ -2.23
SCC2YDR180W NOP6Q07623 225 aaKnown RBP1.14□□□□□ -2.23
SCC2YDR180W TRE2Q08693 809 aa1.14□□□□□ -2.23
SCC2YDR180W TY1A-DR3Q12441 440 aa1.14□□□□□ -2.23
SCC2YDR180W RPS31P05759 152 aaKnown RBP1.14□□□□□ -2.23
SCC2YDR180W CMP2P14747 604 aa1.14□□□□□ -2.23
SCC2YDR180W SEC18P18759 758 aaKnown RBP1.14□□□□□ -2.23
SCC2YDR180W TPD3P31383 635 aa1.14□□□□□ -2.23
SCC2YDR180W IRE1P32361 1115 aa1.14□□□□□ -2.23
SCC2YDR180W HXT1P32465 570 aa1.14□□□□□ -2.23
SCC2YDR180W SSE1P32589 693 aaKnown RBP1.14□□□□□ -2.23
SCC2YDR180W YME2P32843 850 aa1.14□□□□□ -2.23
SCC2YDR180W NMD3P38861 518 aaKnown RBP1.14□□□□□ -2.23
SCC2YDR180W SEC9P40357 651 aa1.14□□□□□ -2.23
SCC2YDR180W YIL165CP40446 119 aa1.14□□□□□ -2.23
SCC2YDR180W HIS6P40545 261 aa1.14□□□□□ -2.23
SCC2YDR180W SLS1P42900 643 aa1.14□□□□□ -2.23
SCC2YDR180W IMD4P50094 524 aaKnown RBP1.14□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms