RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W FLR1P38124 548 aa5.11□□□□□ -1.59
HSP42YDR171W ZDS1P50111 915 aaKnown RBP5.11□□□□□ -1.59
HSP42YDR171W MCM6P53091 1017 aaKnown RBP5.11□□□□□ -1.59
HSP42YDR171W EAF7P53911 425 aaKnown RBP5.11□□□□□ -1.59
HSP42YDR171W DNM1P54861 757 aa5.11□□□□□ -1.59
HSP42YDR171W YDR338CQ05497 695 aa5.11□□□□□ -1.59
HSP42YDR171W ADR1P07248 1323 aa5.11□□□□□ -1.59
HSP42YDR171W CFT1Q06632 1357 aaKnown RBP5.11□□□□□ -1.59
HSP42YDR171W MDS3P53094 1487 aa5.11□□□□□ -1.59
HSP42YDR171W TY1B-BRQ12193 1756 aa5.11□□□□□ -1.59
HSP42YDR171W TY1B-GR3Q12316 1755 aa5.11□□□□□ -1.59
HSP42YDR171W TY1B-ORQ92393 1755 aa5.11□□□□□ -1.59
HSP42YDR171W RPL8AP17076 256 aaKnown RBP5.1□□□□□ -1.59
HSP42YDR171W CAD1P24813 409 aaKnown RBP5.1□□□□□ -1.59
HSP42YDR171W SEC21P32074 935 aaKnown RBP5.1□□□□□ -1.59
HSP42YDR171W FPR3P38911 411 aaKnown RBP5.1□□□□□ -1.59
HSP42YDR171W MSS4P38994 779 aa5.1□□□□□ -1.59
HSP42YDR171W MPT5P39016 859 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
HSP42YDR171W VTH1P40438 1549 aa5.1□□□□□ -1.59
HSP42YDR171W VTH2P40890 1549 aa5.1□□□□□ -1.59
HSP42YDR171W CAF16P43569 289 aa5.1□□□□□ -1.59
HSP42YDR171W SSY5P47002 699 aa5.1□□□□□ -1.59
HSP42YDR171W SNT2P53127 1403 aa5.1□□□□□ -1.59
HSP42YDR171W CLU1Q03690 1277 aaKnown RBP5.1□□□□□ -1.59
HSP42YDR171W THI21Q08975 551 aa5.1□□□□□ -1.59
HSP42YDR171W KAR4P25583 335 aa5.09□□□□□ -1.59
HSP42YDR171W OPY1P38271 328 aa5.09□□□□□ -1.59
HSP42YDR171W SAK1P38990 1142 aa5.09□□□□□ -1.59
HSP42YDR171W YNL193WP53870 558 aa5.09□□□□□ -1.59
HSP42YDR171W SNP1Q00916 300 aaPredicted RBP5.09□□□□□ -1.59
HSP42YDR171W YGR161W-CQ3E744 92 aa5.09□□□□□ -1.59
HSP42YDR171W TY1B-JR2P47100 1755 aaKnown RBP5.09□□□□□ -1.6
HSP42YDR171W TY1B-ER2Q03619 1755 aa5.09□□□□□ -1.6
HSP42YDR171W TY1B-MR1Q04214 1755 aa5.09□□□□□ -1.6
HSP42YDR171W TY1B-MR2Q04670 1755 aaKnown RBP5.09□□□□□ -1.6
HSP42YDR171W TY1B-LR1Q12088 1755 aaKnown RBP5.09□□□□□ -1.6
HSP42YDR171W TY1B-NL1Q12112 1755 aa5.09□□□□□ -1.6
HSP42YDR171W TY1B-GR1Q12141 1755 aa5.09□□□□□ -1.6
HSP42YDR171W TY1B-BLQ12490 1755 aa5.09□□□□□ -1.6
HSP42YDR171W PCL2P25693 308 aa5.08□□□□□ -1.6
HSP42YDR171W RPN10P38886 268 aaKnown RBP5.08□□□□□ -1.6
HSP42YDR171W TAF1P46677 1066 aa5.08□□□□□ -1.6
HSP42YDR171W SLU7Q02775 382 aaKnown RBP5.08□□□□□ -1.6
HSP42YDR171W UTP14Q04500 899 aaKnown RBP5.08□□□□□ -1.6
HSP42YDR171W YLR001CQ07895 862 aa5.08□□□□□ -1.6
HSP42YDR171W ESC8Q08119 714 aa5.08□□□□□ -1.6
HSP42YDR171W TUB3P09734 445 aaKnown RBP5.07□□□□□ -1.6
HSP42YDR171W STE11P23561 717 aa5.07□□□□□ -1.6
HSP42YDR171W CTS1P29029 562 aa5.07□□□□□ -1.6
HSP42YDR171W HOG1P32485 435 aa5.07□□□□□ -1.6
HSP42YDR171W VHR1P40522 640 aa5.07□□□□□ -1.6
HSP42YDR171W MNN10P50108 393 aaKnown RBP5.07□□□□□ -1.6
HSP42YDR171W EXG2P52911 562 aa5.07□□□□□ -1.6
HSP42YDR171W ZIP2P53061 704 aa5.07□□□□□ -1.6
HSP42YDR171W AIM14P53109 570 aa5.07□□□□□ -1.6
HSP42YDR171W DOS2P54858 310 aa5.07□□□□□ -1.6
HSP42YDR171W PEX19Q07418 342 aa5.07□□□□□ -1.6
HSP42YDR171W SWM1Q12379 170 aa5.07□□□□□ -1.6
HSP42YDR171W Q0142Q9ZZW4 58 aa5.07□□□□□ -1.6
HSP42YDR171W PRP4P20053 465 aaKnown RBP5.06□□□□□ -1.6
HSP42YDR171W SFL1P20134 766 aa5.06□□□□□ -1.6
HSP42YDR171W MIH1P23748 554 aa5.06□□□□□ -1.6
HSP42YDR171W SHM2P37291 469 aaKnown RBP5.06□□□□□ -1.6
HSP42YDR171W PZF1P39933 429 aa5.06□□□□□ -1.6
HSP42YDR171W YFL052WP43551 465 aa5.06□□□□□ -1.6
HSP42YDR171W YFR016CP43597 1233 aaKnown RBP5.06□□□□□ -1.6
HSP42YDR171W SDA1P53313 767 aaKnown RBP5.06□□□□□ -1.6
HSP42YDR171W NHX1Q04121 633 aa5.06□□□□□ -1.6
HSP42YDR171W ASM4Q05166 528 aa5.06□□□□□ -1.6
HSP42YDR171W LAS17Q12446 633 aa5.06□□□□□ -1.6
HSP42YDR171W GEA2P39993 1459 aaKnown RBP5.06□□□□□ -1.6
HSP42YDR171W ARO1P08566 1588 aaKnown RBP5.05□□□□□ -1.6
HSP42YDR171W RPP0P05317 312 aaKnown RBP5.05□□□□□ -1.6
HSP42YDR171W HMG1P12683 1054 aa5.05□□□□□ -1.6
HSP42YDR171W YKR051WP36142 418 aa5.05□□□□□ -1.6
HSP42YDR171W DOT6P40059 670 aaKnown RBP5.05□□□□□ -1.6
HSP42YDR171W PFA3P42836 336 aa5.05□□□□□ -1.6
HSP42YDR171W MTR3P48240 250 aaPredicted RBP5.05□□□□□ -1.6
HSP42YDR171W HLJ1P48353 224 aa5.05□□□□□ -1.6
HSP42YDR171W UBC9P50623 157 aaPredicted RBP5.05□□□□□ -1.6
HSP42YDR171W PHO23P50947 330 aa5.05□□□□□ -1.6
HSP42YDR171W MET13P53128 600 aa5.05□□□□□ -1.6
HSP42YDR171W NPY1P53164 384 aa5.05□□□□□ -1.6
HSP42YDR171W ASI2P53895 289 aa5.05□□□□□ -1.6
HSP42YDR171W MUS81Q04149 632 aaPredicted RBP5.05□□□□□ -1.6
HSP42YDR171W GDB1Q06625 1536 aa5.05□□□□□ -1.6
HSP42YDR171W TY3B-IQ7LHG5 1498 aaKnown RBP5.05□□□□□ -1.6
HSP42YDR171W GIP4P39732 760 aa5.04□□□□□ -1.6
HSP42YDR171W YIR014WP40570 242 aa5.04□□□□□ -1.6
HSP42YDR171W PKH1Q03407 766 aa5.04□□□□□ -1.6
HSP42YDR171W ATG33Q06485 197 aa5.04□□□□□ -1.6
HSP42YDR171W GUP2Q08929 609 aa5.04□□□□□ -1.6
HSP42YDR171W YLR149CQ99296 730 aa5.04□□□□□ -1.6
HSP42YDR171W PFK1P16861 987 aaKnown RBP5.03□□□□□ -1.6
HSP42YDR171W HCM1P25364 564 aa5.03□□□□□ -1.6
HSP42YDR171W YKL222CP35995 705 aa5.03□□□□□ -1.6
HSP42YDR171W HSL7P38274 827 aa5.03□□□□□ -1.6
HSP42YDR171W PCM1P38628 557 aaKnown RBP5.03□□□□□ -1.6
HSP42YDR171W RPP1P38786 293 aa5.03□□□□□ -1.6
HSP42YDR171W CRP1P38845 465 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms