RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W NIP1P32497 812 aaKnown RBP6.17□□□□□ -1.42
VMS1YDR049W SMI1P32566 505 aa6.17□□□□□ -1.42
VMS1YDR049W FBP26P32604 452 aa6.17□□□□□ -1.42
VMS1YDR049W YBR238CP38330 731 aaKnown RBP6.17□□□□□ -1.42
VMS1YDR049W RTS1P38903 757 aa6.17□□□□□ -1.42
VMS1YDR049W AXL2P38928 823 aa6.17□□□□□ -1.42
VMS1YDR049W LTP1P40347 161 aa6.17□□□□□ -1.42
VMS1YDR049W ALG2P43636 503 aa6.17□□□□□ -1.42
VMS1YDR049W GYP7P48365 746 aa6.17□□□□□ -1.42
VMS1YDR049W ARC35P53731 342 aaKnown RBP6.17□□□□□ -1.42
VMS1YDR049W RMT2Q03305 412 aa6.17□□□□□ -1.42
VMS1YDR049W ARP7Q12406 477 aa6.17□□□□□ -1.42
VMS1YDR049W FRE6Q12473 712 aa6.17□□□□□ -1.42
VMS1YDR049W RAS1P01119 309 aa6.17□□□□□ -1.42
VMS1YDR049W PHR1P05066 565 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
VMS1YDR049W CTT1P06115 562 aa6.17□□□□□ -1.42
VMS1YDR049W SNF1P06782 633 aaKnown RBP6.17□□□□□ -1.42
VMS1YDR049W MIS1P09440 975 aaKnown RBP6.17□□□□□ -1.42
VMS1YDR049W MSD1P15179 658 aaKnown RBP6.17□□□□□ -1.42
VMS1YDR049W SEC23P15303 768 aaKnown RBP6.17□□□□□ -1.42
VMS1YDR049W SED4P25365 1065 aa6.17□□□□□ -1.42
VMS1YDR049W MRE11P32829 692 aa6.17□□□□□ -1.42
VMS1YDR049W COY1P34237 679 aa6.17□□□□□ -1.42
VMS1YDR049W NCL1P38205 684 aaKnown RBP6.17□□□□□ -1.42
VMS1YDR049W VPS45P38932 577 aa6.17□□□□□ -1.42
VMS1YDR049W HOP2P53187 214 aa6.17□□□□□ -1.42
VMS1YDR049W SIW14P53965 281 aa6.17□□□□□ -1.42
VMS1YDR049W MCP2Q06567 569 aa6.17□□□□□ -1.42
VMS1YDR049W LEU1P07264 779 aaKnown RBP6.16□□□□□ -1.42
VMS1YDR049W STE6P12866 1290 aa6.16□□□□□ -1.42
VMS1YDR049W MIH1P23748 554 aa6.16□□□□□ -1.42
VMS1YDR049W ROX1P25042 368 aa6.16□□□□□ -1.42
VMS1YDR049W SPB1P25582 841 aaPredicted RBP6.16□□□□□ -1.42
VMS1YDR049W GPI10P30777 616 aa6.16□□□□□ -1.42
VMS1YDR049W VPS17P32913 551 aa6.16□□□□□ -1.42
VMS1YDR049W SQT1P35184 431 aa6.16□□□□□ -1.42
VMS1YDR049W HSL7P38274 827 aa6.16□□□□□ -1.42
VMS1YDR049W SMC2P38989 1170 aaKnown RBP6.16□□□□□ -1.42
VMS1YDR049W BUD16P39988 312 aa6.16□□□□□ -1.42
VMS1YDR049W CCT5P40413 562 aaKnown RBP6.16□□□□□ -1.42
VMS1YDR049W YJR098CP47139 656 aa6.16□□□□□ -1.42
VMS1YDR049W RSM26P47141 266 aa6.16□□□□□ -1.42
VMS1YDR049W YGR153WP48238 217 aa6.16□□□□□ -1.42
VMS1YDR049W NNF2P53253 936 aa6.16□□□□□ -1.42
VMS1YDR049W REX2P54964 269 aaKnown RBP6.16□□□□□ -1.42
VMS1YDR049W ECM9Q02202 377 aa6.16□□□□□ -1.42
VMS1YDR049W ADA2Q02336 434 aa6.16□□□□□ -1.42
VMS1YDR049W YPL107WQ02873 248 aa6.16□□□□□ -1.42
VMS1YDR049W FCP1Q03254 732 aa6.16□□□□□ -1.42
VMS1YDR049W HLR1Q04429 423 aa6.16□□□□□ -1.42
VMS1YDR049W COG8Q04632 607 aa6.16□□□□□ -1.42
VMS1YDR049W CSR1Q06705 408 aaKnown RBP6.16□□□□□ -1.42
VMS1YDR049W YPR015CQ12531 247 aa6.16□□□□□ -1.42
VMS1YDR049W MET17P06106 444 aa6.15□□□□□ -1.42
VMS1YDR049W RRP7P25368 297 aaPredicted RBP6.15□□□□□ -1.42
VMS1YDR049W SCD5P34758 872 aa6.15□□□□□ -1.42
VMS1YDR049W LDH1P38139 375 aa6.15□□□□□ -1.42
VMS1YDR049W GND1P38720 489 aaKnown RBP6.15□□□□□ -1.42
VMS1YDR049W RVS167P39743 482 aaKnown RBP6.15□□□□□ -1.42
VMS1YDR049W NPR2P39923 615 aa6.15□□□□□ -1.42
VMS1YDR049W UBP7P40453 1071 aa6.15□□□□□ -1.42
VMS1YDR049W MKT1P40850 830 aaKnown RBP6.15□□□□□ -1.42
VMS1YDR049W LCB2P40970 561 aa6.15□□□□□ -1.42
VMS1YDR049W YML119WQ03208 357 aa6.15□□□□□ -1.42
VMS1YDR049W MDM36Q06820 579 aa6.15□□□□□ -1.42
VMS1YDR049W YPR027CQ12079 277 aa6.15□□□□□ -1.42
VMS1YDR049W PDH1Q12428 516 aaKnown RBP6.15□□□□□ -1.42
VMS1YDR049W KCS1Q12494 1050 aa6.15□□□□□ -1.42
VMS1YDR049W ENA1P13587 1091 aa6.15□□□□□ -1.43
VMS1YDR049W GUK1P15454 187 aaKnown RBP6.15□□□□□ -1.43
VMS1YDR049W HOP1P20050 605 aa6.15□□□□□ -1.43
VMS1YDR049W STE50P25344 346 aa6.15□□□□□ -1.43
VMS1YDR049W NGG1P32494 702 aa6.15□□□□□ -1.43
VMS1YDR049W RPT3P33298 428 aaKnown RBP6.15□□□□□ -1.43
VMS1YDR049W TEF4P36008 412 aaKnown RBP6.15□□□□□ -1.43
VMS1YDR049W PET10P36139 283 aa6.15□□□□□ -1.43
VMS1YDR049W LAS1P36146 502 aaPredicted RBP6.15□□□□□ -1.43
VMS1YDR049W REI1P38344 393 aaPredicted RBP6.15□□□□□ -1.43
VMS1YDR049W PPE1P38796 400 aa6.15□□□□□ -1.43
VMS1YDR049W DUN1P39009 513 aa6.15□□□□□ -1.43
VMS1YDR049W FIR1P40020 876 aa6.15□□□□□ -1.43
VMS1YDR049W ARF3P40994 183 aaRIP-Chip data6.15□□□□□ -1.43not detected
VMS1YDR049W EPL1P43572 832 aa6.15□□□□□ -1.43
VMS1YDR049W ASK10P48361 1146 aa6.15□□□□□ -1.43
VMS1YDR049W LSB1P53281 241 aa6.15□□□□□ -1.43
VMS1YDR049W YNL247WP53852 767 aaKnown RBP6.15□□□□□ -1.43
VMS1YDR049W CBK1P53894 756 aa6.15□□□□□ -1.43
VMS1YDR049W ENA2Q01896 1091 aa6.15□□□□□ -1.43
VMS1YDR049W SNZ1Q03148 297 aa6.15□□□□□ -1.43
VMS1YDR049W VID22Q05934 901 aa6.15□□□□□ -1.43
VMS1YDR049W NBA1Q08229 501 aaKnown RBP6.15□□□□□ -1.43
VMS1YDR049W ENA5Q12691 1091 aa6.15□□□□□ -1.43
VMS1YDR049W CPA2P03965 1118 aaKnown RBP6.14□□□□□ -1.43
VMS1YDR049W GCD1P09032 578 aaPredicted RBP6.14□□□□□ -1.43
VMS1YDR049W MTF2P10849 440 aa6.14□□□□□ -1.43
VMS1YDR049W LAT1P12695 482 aaKnown RBP6.14□□□□□ -1.43
VMS1YDR049W RAM1P22007 431 aa6.14□□□□□ -1.43
VMS1YDR049W VAC17P25591 423 aa6.14□□□□□ -1.43
VMS1YDR049W EFB1P32471 206 aaKnown RBP6.14□□□□□ -1.43
VMS1YDR049W PEX28P38848 579 aa6.14□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms