RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W HMG1P12683 1054 aa5.7□□□□□ -1.5
SHR3YDL212W HOS4P40480 1083 aa5.7□□□□□ -1.5
SHR3YDL212W YIR042CP40586 236 aa5.7□□□□□ -1.5
SHR3YDL212W YJL163CP46996 555 aa5.7□□□□□ -1.5
SHR3YDL212W AIM14P53109 570 aa5.7□□□□□ -1.5
SHR3YDL212W TEX1P53851 422 aaKnown RBP5.7□□□□□ -1.5
SHR3YDL212W TFB2Q02939 513 aa5.7□□□□□ -1.5
SHR3YDL212W IRC13Q08630 104 aa5.7□□□□□ -1.5
SHR3YDL212W ADE2P21264 571 aaKnown RBP5.69□□□□□ -1.5
SHR3YDL212W YBR259WP38338 688 aa5.69□□□□□ -1.5
SHR3YDL212W MIP6P38760 659 aaKnown RBP5.69□□□□□ -1.5
SHR3YDL212W PRP31P49704 494 aaPredicted RBP5.69□□□□□ -1.5
SHR3YDL212W STB4P50104 949 aa5.69□□□□□ -1.5
SHR3YDL212W ARP4P80428 489 aa5.69□□□□□ -1.5
SHR3YDL212W OMS1Q06668 471 aa5.69□□□□□ -1.5
SHR3YDL212W LAT1P12695 482 aaKnown RBP5.68□□□□□ -1.5
SHR3YDL212W HSL7P38274 827 aa5.68□□□□□ -1.5
SHR3YDL212W PCM1P38628 557 aaKnown RBP5.68□□□□□ -1.5
SHR3YDL212W AMA1P50082 593 aa5.68□□□□□ -1.5
SHR3YDL212W LEE1Q02799 301 aaKnown RBP5.68□□□□□ -1.5
SHR3YDL212W RPN7Q06103 429 aaKnown RBP5.68□□□□□ -1.5
SHR3YDL212W ATG33Q06485 197 aa5.68□□□□□ -1.5
SHR3YDL212W SFL1P20134 766 aa5.67□□□□□ -1.5
SHR3YDL212W YKR018CP36114 725 aa5.67□□□□□ -1.5
SHR3YDL212W YHR112CP38716 378 aa5.67□□□□□ -1.5
SHR3YDL212W BCD1P38772 366 aa5.67□□□□□ -1.5
SHR3YDL212W ECM1P39715 212 aa5.67□□□□□ -1.5
SHR3YDL212W ARG5,6Q01217 863 aa5.67□□□□□ -1.5
SHR3YDL212W RGC1Q06108 1083 aaKnown RBP5.67□□□□□ -1.5
SHR3YDL212W LYS9P38999 446 aa5.66□□□□□ -1.5
SHR3YDL212W BAP3P41815 604 aa5.66□□□□□ -1.5
SHR3YDL212W PCL10P53124 433 aa5.66□□□□□ -1.5
SHR3YDL212W MET13P53128 600 aa5.66□□□□□ -1.5
SHR3YDL212W YNL193WP53870 558 aa5.66□□□□□ -1.5
SHR3YDL212W GAD1Q04792 585 aa5.66□□□□□ -1.5
SHR3YDL212W NOP14Q99207 810 aaKnown RBP5.66□□□□□ -1.5
SHR3YDL212W RPL8AP17076 256 aaKnown RBP5.65□□□□□ -1.5
SHR3YDL212W ERG6P25087 383 aaKnown RBP5.65□□□□□ -1.5
SHR3YDL212W CCR4P31384 837 aaKnown RBP5.65□□□□□ -1.5
SHR3YDL212W YEL1P34225 687 aa5.65□□□□□ -1.5
SHR3YDL212W APL2P36000 726 aaPredicted RBP5.65□□□□□ -1.5
SHR3YDL212W NMD2P38798 1089 aaKnown RBP5.65□□□□□ -1.5
SHR3YDL212W MNN1P39106 762 aa5.65□□□□□ -1.5
SHR3YDL212W YBP2P53169 641 aa5.65□□□□□ -1.5
SHR3YDL212W MTL1P53214 551 aa5.65□□□□□ -1.5
SHR3YDL212W ORC4P54791 529 aa5.65□□□□□ -1.5
SHR3YDL212W TMN2Q04562 672 aa5.65□□□□□ -1.5
SHR3YDL212W ACF2Q12168 779 aa5.65□□□□□ -1.5
SHR3YDL212W MCH5Q08777 521 aa5.64□□□□□ -1.51
SHR3YDL212W ATG11Q12527 1178 aa5.64□□□□□ -1.51
SHR3YDL212W HRP1Q99383 534 aaKnown RBP5.64□□□□□ -1.51
SHR3YDL212W MNN4P36044 1178 aa5.63□□□□□ -1.51
SHR3YDL212W DOT6P40059 670 aaKnown RBP5.63□□□□□ -1.51
SHR3YDL212W UBC11P52492 156 aa5.63□□□□□ -1.51
SHR3YDL212W HMO1Q03973 246 aaKnown RBP5.63□□□□□ -1.51
SHR3YDL212W GIN4Q12263 1142 aa5.63□□□□□ -1.51
SHR3YDL212W HIS7P33734 552 aaKnown RBP5.62□□□□□ -1.51
SHR3YDL212W FMO1P38866 432 aa5.62□□□□□ -1.51
SHR3YDL212W GID8P40208 455 aa5.62□□□□□ -1.51
SHR3YDL212W BRE5P53741 515 aaKnown RBP5.62□□□□□ -1.51
SHR3YDL212W DNM1P54861 757 aa5.62□□□□□ -1.51
SHR3YDL212W COG8Q04632 607 aa5.62□□□□□ -1.51
SHR3YDL212W MCM21Q06675 368 aa5.62□□□□□ -1.51
SHR3YDL212W HIR1P32479 840 aa5.61□□□□□ -1.51
SHR3YDL212W YHL017WP38745 532 aa5.61□□□□□ -1.51
SHR3YDL212W HRB1P38922 454 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
SHR3YDL212W GET2P40056 285 aa5.61□□□□□ -1.51
SHR3YDL212W MGS1P40151 587 aa5.61□□□□□ -1.51
SHR3YDL212W DCS2Q12123 353 aa5.61□□□□□ -1.51
SHR3YDL212W PCL5P38794 229 aa5.6□□□□□ -1.51
SHR3YDL212W FMP52P40008 231 aa5.6□□□□□ -1.51
SHR3YDL212W YNL195CP40168 261 aa5.6□□□□□ -1.51
SHR3YDL212W SDS3P40505 327 aa5.6□□□□□ -1.51
SHR3YDL212W DAS1P47005 663 aa5.6□□□□□ -1.51
SHR3YDL212W UBA2P52488 636 aa5.6□□□□□ -1.51
SHR3YDL212W GND2P53319 492 aa5.6□□□□□ -1.51
SHR3YDL212W ADR1P07248 1323 aa5.59□□□□□ -1.51
SHR3YDL212W SIR3P06701 978 aa5.59□□□□□ -1.51
SHR3YDL212W MTH1P35198 433 aa5.59□□□□□ -1.51
SHR3YDL212W TRZ1P36159 838 aaPredicted RBP5.59□□□□□ -1.51
SHR3YDL212W SSZ1P38788 538 aaKnown RBP5.59□□□□□ -1.51
SHR3YDL212W CCT3P39077 534 aaKnown RBP5.59□□□□□ -1.51
SHR3YDL212W RNR1P21524 888 aaKnown RBP5.58□□□□□ -1.52
SHR3YDL212W YJR142WP47173 342 aa5.58□□□□□ -1.52
SHR3YDL212W TEL2P53038 688 aa5.58□□□□□ -1.52
SHR3YDL212W RIA1P53893 1110 aa5.58□□□□□ -1.52
SHR3YDL212W TIM44Q01852 431 aa5.58□□□□□ -1.52
SHR3YDL212W CTK1Q03957 528 aaKnown RBP5.58□□□□□ -1.52
SHR3YDL212W HBT1Q07653 1046 aaKnown RBP5.58□□□□□ -1.52
SHR3YDL212W GUD1Q07729 489 aa5.58□□□□□ -1.52
SHR3YDL212W SGO1Q08490 590 aa5.58□□□□□ -1.52
SHR3YDL212W MVD1P32377 396 aaKnown RBP5.57□□□□□ -1.52
SHR3YDL212W APT2P36973 181 aa5.57□□□□□ -1.52
SHR3YDL212W NUP60P39705 539 aa5.57□□□□□ -1.52
SHR3YDL212W SET2P46995 733 aaKnown RBP5.57□□□□□ -1.52
SHR3YDL212W YJR039WP47107 1121 aa5.57□□□□□ -1.52
SHR3YDL212W PAN2P53010 1115 aaPredicted RBP5.57□□□□□ -1.52
SHR3YDL212W SDA1P53313 767 aaKnown RBP5.57□□□□□ -1.52
SHR3YDL212W IRC10Q08118 586 aa5.57□□□□□ -1.52
SHR3YDL212W ECM3Q99252 613 aa5.57□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms