RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W TVP38P36164 337 aa2.56□□□□□ -2
UBP1YDL122W BAT1P38891 393 aaKnown RBP2.56□□□□□ -2
UBP1YDL122W VPS45P38932 577 aa2.56□□□□□ -2
UBP1YDL122W GIP4P39732 760 aa2.56□□□□□ -2
UBP1YDL122W VID28P40547 921 aa2.56□□□□□ -2
UBP1YDL122W ATG36P46983 293 aa2.56□□□□□ -2
UBP1YDL122W YJL049WP47048 450 aa2.56□□□□□ -2
UBP1YDL122W DNL4Q08387 944 aaPredicted RBP2.56□□□□□ -2
UBP1YDL122W CLF1Q12309 687 aaPredicted RBP2.56□□□□□ -2
UBP1YDL122W IPP1P00817 287 aaKnown RBP2.56□□□□□ -2
UBP1YDL122W RPP1AP05318 106 aaPredicted RBP2.56□□□□□ -2
UBP1YDL122W RPS31P05759 152 aaKnown RBP2.56□□□□□ -2
UBP1YDL122W HAP2P06774 265 aa2.56□□□□□ -2
UBP1YDL122W PHO4P07270 312 aaKnown RBP2.56□□□□□ -2
UBP1YDL122W RPS6AP0CX37 236 aaKnown RBP2.56□□□□□ -2
UBP1YDL122W RPS6BP0CX38 236 aaPredicted RBP2.56□□□□□ -2
UBP1YDL122W RGD1P38339 666 aa2.56□□□□□ -2
UBP1YDL122W IRC24P40580 263 aa2.56□□□□□ -2
UBP1YDL122W CTR1P49573 406 aa2.56□□□□□ -2
UBP1YDL122W ALG12P53730 551 aa2.56□□□□□ -2
UBP1YDL122W ESC2Q06340 456 aa2.56□□□□□ -2
UBP1YDL122W CDA2Q06703 312 aa2.56□□□□□ -2
UBP1YDL122W HIF1Q12373 385 aa2.56□□□□□ -2
UBP1YDL122W RAD61Q99359 647 aa2.56□□□□□ -2
UBP1YDL122W GPM1P00950 247 aaKnown RBP2.55□□□□□ -2
UBP1YDL122W GAL4P04386 881 aa2.55□□□□□ -2
UBP1YDL122W LEU1P07264 779 aaKnown RBP2.55□□□□□ -2
UBP1YDL122W SAM2P19358 384 aaKnown RBP2.55□□□□□ -2
UBP1YDL122W FPS1P23900 669 aa2.55□□□□□ -2
UBP1YDL122W TSR4P25040 408 aa2.55□□□□□ -2
UBP1YDL122W GCD6P32501 712 aaKnown RBP2.55□□□□□ -2
UBP1YDL122W TOM20P35180 183 aa2.55□□□□□ -2
UBP1YDL122W UBX6P47049 396 aa2.55□□□□□ -2
UBP1YDL122W NUT1P53114 1132 aa2.55□□□□□ -2
UBP1YDL122W NMA2P53204 395 aa2.55□□□□□ -2
UBP1YDL122W GPI13Q07830 1017 aa2.55□□□□□ -2
UBP1YDL122W PLP2Q12017 286 aa2.55□□□□□ -2
UBP1YDL122W SSF2Q12153 453 aaPredicted RBP2.55□□□□□ -2
UBP1YDL122W RKM4Q12504 494 aa2.55□□□□□ -2
UBP1YDL122W STI1P15705 589 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
UBP1YDL122W VID27P40157 782 aa2.54□□□□□ -2
UBP1YDL122W YGL036WP53185 909 aaPredicted RBP2.54□□□□□ -2
UBP1YDL122W LSB1P53281 241 aa2.54□□□□□ -2
UBP1YDL122W UFD2P54860 961 aa2.54□□□□□ -2
UBP1YDL122W UBP3Q01477 912 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
UBP1YDL122W POB3Q04636 552 aaKnown RBP2.54□□□□□ -2
UBP1YDL122W YLR456WQ06199 204 aa2.54□□□□□ -2
UBP1YDL122W YIL046W-AQ3E7Z4 54 aa2.54□□□□□ -2
UBP1YDL122W CYT1P07143 309 aa2.54□□□□□ -2
UBP1YDL122W MAS1P10507 462 aa2.54□□□□□ -2
UBP1YDL122W GAC1P28006 793 aa2.54□□□□□ -2
UBP1YDL122W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
UBP1YDL122W MRPL16P38064 232 aa2.54□□□□□ -2
UBP1YDL122W MED6P38782 295 aa2.54□□□□□ -2
UBP1YDL122W RTS1P38903 757 aa2.54□□□□□ -2
UBP1YDL122W RPS26AP39938 119 aaKnown RBP2.54□□□□□ -2
UBP1YDL122W RPS26BP39939 119 aaKnown RBP2.54□□□□□ -2
UBP1YDL122W YJR061WP40355 935 aa2.54□□□□□ -2
UBP1YDL122W DAK2P43550 591 aa2.54□□□□□ -2
UBP1YDL122W SUB1P54000 292 aaKnown RBP2.54□□□□□ -2
UBP1YDL122W RPN4Q03465 531 aa2.54□□□□□ -2
UBP1YDL122W FMP45Q07651 309 aa2.54□□□□□ -2
UBP1YDL122W ESC8Q08119 714 aa2.54□□□□□ -2
UBP1YDL122W YPR053CQ6Q5F3 151 aa2.54□□□□□ -2
UBP1YDL122W FPR1P20081 114 aaKnown RBP2.53□□□□□ -2
UBP1YDL122W STE11P23561 717 aa2.53□□□□□ -2
UBP1YDL122W CHS3P29465 1165 aa2.53□□□□□ -2
UBP1YDL122W ISC10P32645 267 aa2.53□□□□□ -2
UBP1YDL122W PET112P33893 541 aa2.53□□□□□ -2
UBP1YDL122W MNR2P35724 969 aa2.53□□□□□ -2
UBP1YDL122W SRX1P36077 127 aa2.53□□□□□ -2
UBP1YDL122W GRX7P38068 203 aa2.53□□□□□ -2
UBP1YDL122W YBR287WP38355 427 aa2.53□□□□□ -2
UBP1YDL122W SAH1P39954 449 aaKnown RBP2.53□□□□□ -2
UBP1YDL122W LAM5P43560 674 aa2.53□□□□□ -2
UBP1YDL122W FET5P43561 622 aa2.53□□□□□ -2
UBP1YDL122W ENP2P48234 707 aaKnown RBP2.53□□□□□ -2
UBP1YDL122W CCM1P48237 864 aaPredicted RBP2.53□□□□□ -2
UBP1YDL122W BRR2P32639 2163 aaKnown RBP2.53□□□□□ -2
UBP1YDL122W RAD2P07276 1031 aa2.53□□□□□ -2
UBP1YDL122W KNS1P32350 737 aaPredicted RBP2.53□□□□□ -2
UBP1YDL122W VPS35P34110 944 aa2.53□□□□□ -2
UBP1YDL122W AAP1P37898 856 aaKnown RBP2.53□□□□□ -2
UBP1YDL122W DUG2P38149 878 aa2.53□□□□□ -2
UBP1YDL122W PBP2P38151 413 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
UBP1YDL122W YBR197CP38306 217 aa2.53□□□□□ -2
UBP1YDL122W MCX1P38323 520 aaPredicted RBP2.53□□□□□ -2
UBP1YDL122W SKN7P38889 622 aa2.53□□□□□ -2
UBP1YDL122W PIK1P39104 1066 aa2.53□□□□□ -2
UBP1YDL122W YTA6P40328 754 aa2.53□□□□□ -2
UBP1YDL122W ADA2Q02336 434 aa2.53□□□□□ -2
UBP1YDL122W OXR1Q08952 273 aa2.53□□□□□ -2
UBP1YDL122W PKH2Q12236 1081 aaKnown RBP2.53□□□□□ -2
UBP1YDL122W RPB10P22139 70 aa2.52□□□□□ -2.01
UBP1YDL122W ERG6P25087 383 aaKnown RBP2.52□□□□□ -2.01
UBP1YDL122W GCS1P35197 352 aa2.52□□□□□ -2.01
UBP1YDL122W VPS8P39702 1274 aa2.52□□□□□ -2.01
UBP1YDL122W BUD6P41697 788 aa2.52□□□□□ -2.01
UBP1YDL122W SAM37P50110 327 aa2.52□□□□□ -2.01
UBP1YDL122W YGR122WP53272 402 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 52 ms