RNA–Protein interactions for RNA: YCR096C

HMRA2, Transcript of Silenced copy of a2 at HMR, yeast

Gene HMRA2, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA2	YCR096C	MLH3	Q12083	715 aa		3.17	□□□□□ -1.9
HMRA2	YCR096C	CCR4	P31384	837 aa	Known RBP	3.16	□□□□□ -1.9
HMRA2	YCR096C	MVD1	P32377	396 aa	Known RBP	3.16	□□□□□ -1.9
HMRA2	YCR096C	PHO11	P35842	467 aa		3.16	□□□□□ -1.9
HMRA2	YCR096C	PHO12	P38693	467 aa		3.16	□□□□□ -1.9
HMRA2	YCR096C	LYS9	P38999	446 aa		3.16	□□□□□ -1.9
HMRA2	YCR096C	IRR1	P40541	1150 aa		3.16	□□□□□ -1.9
HMRA2	YCR096C	TAD1	P53065	400 aa		3.16	□□□□□ -1.9
HMRA2	YCR096C	THI21	Q08975	551 aa		3.16	□□□□□ -1.9
HMRA2	YCR096C	APN1	P22936	367 aa		3.15	□□□□□ -1.91
HMRA2	YCR096C	ASF1	P32447	279 aa		3.15	□□□□□ -1.91
HMRA2	YCR096C	YPL068C	Q02749	293 aa		3.15	□□□□□ -1.91
HMRA2	YCR096C	FMP30	Q02883	468 aa		3.15	□□□□□ -1.91
HMRA2	YCR096C	RPA135	P22138	1203 aa	Known RBP	3.14	□□□□□ -1.91
HMRA2	YCR096C	MTR3	P48240	250 aa	Predicted RBP	3.14	□□□□□ -1.91
HMRA2	YCR096C	MSD1	P15179	658 aa	Known RBP	3.13	□□□□□ -1.91
HMRA2	YCR096C	THR1	P17423	357 aa	Known RBP	3.13	□□□□□ -1.91
HMRA2	YCR096C	FUB1	P25659	250 aa		3.13	□□□□□ -1.91
HMRA2	YCR096C	SAP190	P36123	1033 aa		3.13	□□□□□ -1.91
HMRA2	YCR096C	PFD1	P46988	109 aa		3.13	□□□□□ -1.91
HMRA2	YCR096C	PRP9	P19736	530 aa	Known RBP	3.12	□□□□□ -1.91
HMRA2	YCR096C	MBR1	P23493	339 aa		3.12	□□□□□ -1.91
HMRA2	YCR096C	YMC1	P32331	307 aa		3.12	□□□□□ -1.91
HMRA2	YCR096C	PET10	P36139	283 aa		3.12	□□□□□ -1.91
HMRA2	YCR096C	NUP60	P39705	539 aa		3.12	□□□□□ -1.91
HMRA2	YCR096C	ECM1	P39715	212 aa		3.12	□□□□□ -1.91
HMRA2	YCR096C	NIT3	P49954	291 aa		3.12	□□□□□ -1.91
HMRA2	YCR096C	PIN2	Q12057	282 aa		3.12	□□□□□ -1.91
HMRA2	YCR096C	USV1	Q12132	391 aa		3.12	□□□□□ -1.91
HMRA2	YCR096C	STE12	P13574	688 aa		3.11	□□□□□ -1.91
HMRA2	YCR096C	CDC11	P32458	415 aa		3.11	□□□□□ -1.91
HMRA2	YCR096C	SET3	P36124	751 aa		3.11	□□□□□ -1.91
HMRA2	YCR096C	ALR2	P43553	858 aa		3.11	□□□□□ -1.91
HMRA2	YCR096C	TAX4	P47030	604 aa		3.11	□□□□□ -1.91
HMRA2	YCR096C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
HMRA2	YCR096C	STP1	Q00947	519 aa		3.11	□□□□□ -1.91
HMRA2	YCR096C	CTK1	Q03957	528 aa	Known RBP	3.11	□□□□□ -1.91
HMRA2	YCR096C	ADE5,7	P07244	802 aa	Known RBP	3.1	□□□□□ -1.91
HMRA2	YCR096C	GMH1	P36125	273 aa		3.1	□□□□□ -1.91
HMRA2	YCR096C	YBR184W	P38299	523 aa		3.1	□□□□□ -1.91
HMRA2	YCR096C	YHR112C	P38716	378 aa		3.1	□□□□□ -1.91
HMRA2	YCR096C	MAD1	P40957	749 aa		3.1	□□□□□ -1.91
HMRA2	YCR096C	HFD1	Q04458	532 aa		3.1	□□□□□ -1.91
HMRA2	YCR096C	EAF1	Q06337	982 aa		3.1	□□□□□ -1.91
HMRA2	YCR096C	HBN1	Q96VH4	193 aa		3.1	□□□□□ -1.91
HMRA2	YCR096C	ERG6	P25087	383 aa	Known RBP	3.09	□□□□□ -1.91
HMRA2	YCR096C	SAT4	P25333	603 aa	Known RBP	3.09	□□□□□ -1.91
HMRA2	YCR096C	YMC2	P38087	329 aa		3.09	□□□□□ -1.91
HMRA2	YCR096C	SET5	P38890	526 aa	Known RBP	3.09	□□□□□ -1.91
HMRA2	YCR096C	PRP31	P49704	494 aa	Predicted RBP	3.09	□□□□□ -1.91
HMRA2	YCR096C	ZIP2	P53061	704 aa		3.09	□□□□□ -1.91
HMRA2	YCR096C	YML020W	Q03722	664 aa		3.09	□□□□□ -1.91
HMRA2	YCR096C	ADE2	P21264	571 aa	Known RBP	3.08	□□□□□ -1.92
HMRA2	YCR096C	EMC3	P36039	253 aa		3.08	□□□□□ -1.92
HMRA2	YCR096C	SPF1	P39986	1215 aa	Known RBP	3.08	□□□□□ -1.92
HMRA2	YCR096C	MIT1	P40002	666 aa		3.08	□□□□□ -1.92
HMRA2	YCR096C	ZRT2	Q12436	422 aa		3.08	□□□□□ -1.92
HMRA2	YCR096C	YBR182C-A	Q8TGU6	64 aa		3.08	□□□□□ -1.92
HMRA2	YCR096C	HRP1	Q99383	534 aa	Known RBP	3.08	□□□□□ -1.92
HMRA2	YCR096C	KCC4	P25389	1037 aa		3.07	□□□□□ -1.92
HMRA2	YCR096C	UGP1	P32861	499 aa	Known RBP	3.07	□□□□□ -1.92
HMRA2	YCR096C	PMC1	P38929	1173 aa	Predicted RBP	3.07	□□□□□ -1.92
HMRA2	YCR096C	CCT5	P40413	562 aa	Known RBP	3.07	□□□□□ -1.92
HMRA2	YCR096C	ULP2	P40537	1034 aa	Predicted RBP	3.07	□□□□□ -1.92
HMRA2	YCR096C	GYP8	P43570	497 aa		3.07	□□□□□ -1.92
HMRA2	YCR096C	UBX5	Q06682	500 aa		3.07	□□□□□ -1.92
HMRA2	YCR096C	FMP25	Q08023	583 aa		3.07	□□□□□ -1.92
HMRA2	YCR096C	PHO5	P00635	467 aa		3.06	□□□□□ -1.92
HMRA2	YCR096C	TRZ1	P36159	838 aa	Predicted RBP	3.06	□□□□□ -1.92
HMRA2	YCR096C	IRC8	P47046	822 aa		3.06	□□□□□ -1.92
HMRA2	YCR096C	YBP2	P53169	641 aa		3.06	□□□□□ -1.92
HMRA2	YCR096C	UTP8	P53276	713 aa	Known RBP	3.06	□□□□□ -1.92
HMRA2	YCR096C	YGR283C	P53336	341 aa	Predicted RBP	3.06	□□□□□ -1.92
HMRA2	YCR096C	SPC98	P53540	846 aa		3.06	□□□□□ -1.92
HMRA2	YCR096C	APL2	P36000	726 aa	Predicted RBP	3.05	□□□□□ -1.92
HMRA2	YCR096C	PSA1	P41940	361 aa	Known RBP	3.05	□□□□□ -1.92
HMRA2	YCR096C	ASN1	P49089	572 aa	Known RBP	3.05	□□□□□ -1.92
HMRA2	YCR096C	NOP1	P15646	327 aa	Known RBP	3.04	□□□□□ -1.92
HMRA2	YCR096C	ECM32	P32644	1121 aa	Known RBP	3.04	□□□□□ -1.92
HMRA2	YCR096C	HOT13	P36078	116 aa		3.04	□□□□□ -1.92
HMRA2	YCR096C	GET2	P40056	285 aa		3.04	□□□□□ -1.92
HMRA2	YCR096C	SHR5	P41912	237 aa		3.04	□□□□□ -1.92
HMRA2	YCR096C	HXT16	P47185	567 aa		3.04	□□□□□ -1.92
HMRA2	YCR096C	YGR151C	P53287	111 aa		3.04	□□□□□ -1.92
HMRA2	YCR096C	ARG5,6	Q01217	863 aa		3.04	□□□□□ -1.92
HMRA2	YCR096C	TDA5	Q06417	326 aa	Known RBP	3.04	□□□□□ -1.92
HMRA2	YCR096C	ULA1	Q12059	462 aa		3.04	□□□□□ -1.92
HMRA2	YCR096C	CRP1	P38845	465 aa	Known RBP	3.03	□□□□□ -1.92
HMRA2	YCR096C	KSP1	P38691	1029 aa	Known RBP	3.02	□□□□□ -1.93
HMRA2	YCR096C	RLP7	P40693	322 aa	Known RBP	3.02	□□□□□ -1.93
HMRA2	YCR096C	REH1	Q06709	432 aa		3.02	□□□□□ -1.93
HMRA2	YCR096C	NOP8	Q08287	484 aa	Predicted RBP	3.02	□□□□□ -1.93
HMRA2	YCR096C	RPL8B	P29453	256 aa	Known RBP	3.01	□□□□□ -1.93
HMRA2	YCR096C	UBP6	P43593	499 aa	Known RBP	3.01	□□□□□ -1.93
HMRA2	YCR096C	YDR514C	Q04408	483 aa		3.01	□□□□□ -1.93
HMRA2	YCR096C	JIP5	Q06214	492 aa	Predicted RBP	3.01	□□□□□ -1.93
HMRA2	YCR096C	MCM21	Q06675	368 aa		3.01	□□□□□ -1.93
HMRA2	YCR096C	CLF1	Q12309	687 aa	Predicted RBP	3.01	□□□□□ -1.93
HMRA2	YCR096C	DIF1	O13577	133 aa		3	□□□□□ -1.93
HMRA2	YCR096C	ZDS1	P50111	915 aa	Known RBP	3	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 44.1 ms