RNA–Protein interactions for RNA: YBR216C

YBP1, Transcript of Protein involved in cellular response to oxidative stress, yeast

Gene YBP1, Length 2,025 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YBP1	YBR216C	MET7	Q08645	548 aa		3.03	□□□□□ -1.92
YBP1	YBR216C	YBR182C-A	Q8TGU6	64 aa		3.03	□□□□□ -1.92
YBP1	YBR216C	CCT3	P39077	534 aa	Known RBP	3.02	□□□□□ -1.93
YBP1	YBR216C	ECM1	P39715	212 aa		3.02	□□□□□ -1.93
YBP1	YBR216C	CCT7	P42943	550 aa	Known RBP	3.02	□□□□□ -1.93
YBP1	YBR216C	YBP2	P53169	641 aa		3.02	□□□□□ -1.93
YBP1	YBR216C	THI7	Q05998	598 aa		3.02	□□□□□ -1.93
YBP1	YBR216C	TAF3	Q12297	353 aa		3.02	□□□□□ -1.93
YBP1	YBR216C	ATP25	Q03153	612 aa		3.02	□□□□□ -1.93
YBP1	YBR216C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	3.01	□□□□□ -1.93	not detected
YBP1	YBR216C	SIR3	P06701	978 aa		3.01	□□□□□ -1.93
YBP1	YBR216C	BET3	P36149	193 aa		3.01	□□□□□ -1.93
YBP1	YBR216C	YKL033W-A	Q86ZR7	236 aa		3.01	□□□□□ -1.93
YBP1	YBR216C	PYC1	P11154	1178 aa	Known RBP	3	□□□□□ -1.93
YBP1	YBR216C	PER1	P25625	357 aa		3	□□□□□ -1.93
YBP1	YBR216C	ARG2	P40360	574 aa		3	□□□□□ -1.93
YBP1	YBR216C	ALY2	P47029	1046 aa		3	□□□□□ -1.93
YBP1	YBR216C	HXT16	P47185	567 aa		3	□□□□□ -1.93
YBP1	YBR216C	PRP31	P49704	494 aa	Predicted RBP	3	□□□□□ -1.93
YBP1	YBR216C	FLC1	Q08967	793 aa		3	□□□□□ -1.93
YBP1	YBR216C	MVD1	P32377	396 aa	Known RBP	3	□□□□□ -1.93
YBP1	YBR216C	EMP70	P32802	667 aa		3	□□□□□ -1.93
YBP1	YBR216C	SPC29	P33419	253 aa		3	□□□□□ -1.93
YBP1	YBR216C	SFB3	P38810	929 aa		3	□□□□□ -1.93
YBP1	YBR216C	YEL020C	P39994	560 aa		3	□□□□□ -1.93
YBP1	YBR216C	PAN2	P53010	1115 aa	Predicted RBP	3	□□□□□ -1.93
YBP1	YBR216C	CTK1	Q03957	528 aa	Known RBP	3	□□□□□ -1.93
YBP1	YBR216C	RPN13	O13563	156 aa		2.99	□□□□□ -1.93
YBP1	YBR216C	GLG1	P36143	616 aa		2.99	□□□□□ -1.93
YBP1	YBR216C	YHR020W	P38708	688 aa	Known RBP	2.99	□□□□□ -1.93
YBP1	YBR216C	BDH2	P39713	417 aa		2.99	□□□□□ -1.93
YBP1	YBR216C	CTR1	P49573	406 aa		2.99	□□□□□ -1.93
YBP1	YBR216C	MTL1	P53214	551 aa		2.99	□□□□□ -1.93
YBP1	YBR216C	FMO1	P38866	432 aa		2.98	□□□□□ -1.93
YBP1	YBR216C	RTA1	P53047	317 aa		2.98	□□□□□ -1.93
YBP1	YBR216C	YAP7	Q08182	245 aa		2.98	□□□□□ -1.93
YBP1	YBR216C	ICT1	Q12385	394 aa		2.98	□□□□□ -1.93
YBP1	YBR216C	YDR338C	Q05497	695 aa		2.98	□□□□□ -1.93
YBP1	YBR216C	ADE2	P21264	571 aa	Known RBP	2.97	□□□□□ -1.93
YBP1	YBR216C	ORC2	P32833	620 aa		2.97	□□□□□ -1.93
YBP1	YBR216C	APL2	P36000	726 aa	Predicted RBP	2.97	□□□□□ -1.93
YBP1	YBR216C	TRZ1	P36159	838 aa	Predicted RBP	2.97	□□□□□ -1.93
YBP1	YBR216C	APT2	P36973	181 aa		2.97	□□□□□ -1.93
YBP1	YBR216C	YHR112C	P38716	378 aa		2.97	□□□□□ -1.93
YBP1	YBR216C	LYS9	P38999	446 aa		2.97	□□□□□ -1.93
YBP1	YBR216C	NUP60	P39705	539 aa		2.97	□□□□□ -1.93
YBP1	YBR216C	RSP5	P39940	809 aa	Known RBP	2.97	□□□□□ -1.93
YBP1	YBR216C	YJL049W	P47048	450 aa		2.97	□□□□□ -1.93
YBP1	YBR216C	ATG4	P53867	494 aa		2.97	□□□□□ -1.93
YBP1	YBR216C	ORC4	P54791	529 aa		2.97	□□□□□ -1.93
YBP1	YBR216C	MRI1	Q06489	411 aa	Known RBP	2.97	□□□□□ -1.93
YBP1	YBR216C	CAN1	P04817	590 aa		2.97	□□□□□ -1.93
YBP1	YBR216C	GAL11	P19659	1081 aa		2.97	□□□□□ -1.93
YBP1	YBR216C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	2.97	□□□□□ -1.93	not detected
YBP1	YBR216C	TY4A-J	P47023	414 aa		2.97	□□□□□ -1.93
YBP1	YBR216C	HUL5	P53119	910 aa		2.97	□□□□□ -1.93
YBP1	YBR216C	CCR4	P31384	837 aa	Known RBP	2.96	□□□□□ -1.94
YBP1	YBR216C	TMT1	P32643	299 aa		2.96	□□□□□ -1.94
YBP1	YBR216C	PHO11	P35842	467 aa		2.96	□□□□□ -1.94
YBP1	YBR216C	UBS1	P38290	277 aa		2.96	□□□□□ -1.94
YBP1	YBR216C	PHO12	P38693	467 aa		2.96	□□□□□ -1.94
YBP1	YBR216C	GLO1	P50107	326 aa		2.96	□□□□□ -1.94
YBP1	YBR216C	UBC9	P50623	157 aa	Predicted RBP	2.96	□□□□□ -1.94
YBP1	YBR216C	FHN1	P53279	174 aa		2.96	□□□□□ -1.94
YBP1	YBR216C	ARG5,6	Q01217	863 aa		2.96	□□□□□ -1.94
YBP1	YBR216C	MCM21	Q06675	368 aa		2.96	□□□□□ -1.94
YBP1	YBR216C	YFL052W	P43551	465 aa		2.95	□□□□□ -1.94
YBP1	YBR216C	SEC5	P89102	971 aa		2.95	□□□□□ -1.94
YBP1	YBR216C	HOM2	P13663	365 aa	Known RBP	2.95	□□□□□ -1.94
YBP1	YBR216C	MLH3	Q12083	715 aa		2.95	□□□□□ -1.94
YBP1	YBR216C	YLR149C	Q99296	730 aa		2.95	□□□□□ -1.94
YBP1	YBR216C	HRP1	Q99383	534 aa	Known RBP	2.95	□□□□□ -1.94
YBP1	YBR216C	ERG6	P25087	383 aa	Known RBP	2.94	□□□□□ -1.94
YBP1	YBR216C	PAC2	P39937	518 aa		2.94	□□□□□ -1.94
YBP1	YBR216C	CLF1	Q12309	687 aa	Predicted RBP	2.94	□□□□□ -1.94
YBP1	YBR216C	ZRT2	Q12436	422 aa		2.94	□□□□□ -1.94
YBP1	YBR216C	VPS34	P22543	875 aa		2.93	□□□□□ -1.94
YBP1	YBR216C	MUP3	P38734	546 aa		2.93	□□□□□ -1.94
YBP1	YBR216C	BNA2	P47125	453 aa		2.93	□□□□□ -1.94
YBP1	YBR216C	USV1	Q12132	391 aa		2.93	□□□□□ -1.94
YBP1	YBR216C	THR1	P17423	357 aa	Known RBP	2.93	□□□□□ -1.94
YBP1	YBR216C	MIP6	P38760	659 aa	Known RBP	2.93	□□□□□ -1.94
YBP1	YBR216C	NPY1	P53164	384 aa		2.93	□□□□□ -1.94
YBP1	YBR216C	RIM13	Q03792	727 aa		2.93	□□□□□ -1.94
YBP1	YBR216C	RGC1	Q06108	1083 aa	Known RBP	2.93	□□□□□ -1.94
YBP1	YBR216C	Q0142	Q9ZZW4	58 aa		2.93	□□□□□ -1.94
YBP1	YBR216C	FUB1	P25659	250 aa		2.92	□□□□□ -1.94
YBP1	YBR216C	CRP1	P38845	465 aa	Known RBP	2.92	□□□□□ -1.94
YBP1	YBR216C	RPN10	P38886	268 aa	Known RBP	2.92	□□□□□ -1.94
YBP1	YBR216C	GET2	P40056	285 aa		2.92	□□□□□ -1.94
YBP1	YBR216C	MRK1	P50873	501 aa		2.92	□□□□□ -1.94
YBP1	YBR216C	RNR1	P21524	888 aa	Known RBP	2.92	□□□□□ -1.94
YBP1	YBR216C	MTC2	P34246	357 aa		2.92	□□□□□ -1.94
YBP1	YBR216C	MCD4	P36051	919 aa		2.92	□□□□□ -1.94
YBP1	YBR216C	GMH1	P36125	273 aa		2.92	□□□□□ -1.94
YBP1	YBR216C	GDH3	P39708	457 aa		2.92	□□□□□ -1.94
YBP1	YBR216C	REC102	Q02721	264 aa		2.92	□□□□□ -1.94
YBP1	YBR216C	SEG1	Q04279	960 aa		2.92	□□□□□ -1.94
YBP1	YBR216C	SLK19	Q08581	821 aa	Known RBP	2.92	□□□□□ -1.94
YBP1	YBR216C	OSW1	Q08692	278 aa		2.92	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 110.6 ms