RNA–Protein interactions for RNA: YBR106W

PHO88, Transcript of Probable membrane protein, yeast

Gene PHO88, Length 567 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PHO88	YBR106W	SRP101	P32916	621 aa		4.11	□□□□□ -1.75
PHO88	YBR106W	OAF3	P36023	863 aa		4.11	□□□□□ -1.75
PHO88	YBR106W	APT2	P36973	181 aa		4.11	□□□□□ -1.75
PHO88	YBR106W	FUI1	P38196	639 aa		4.11	□□□□□ -1.75
PHO88	YBR106W	SRP68	P38687	599 aa	Known RBP	4.11	□□□□□ -1.75
PHO88	YBR106W	SSZ1	P38788	538 aa	Known RBP	4.11	□□□□□ -1.75
PHO88	YBR106W	YHR078W	P38799	552 aa		4.11	□□□□□ -1.75
PHO88	YBR106W	SKN7	P38889	622 aa		4.11	□□□□□ -1.75
PHO88	YBR106W	SDP1	P40479	209 aa		4.11	□□□□□ -1.75
PHO88	YBR106W	MND2	P40577	368 aa		4.11	□□□□□ -1.75
PHO88	YBR106W	SSY5	P47002	699 aa		4.11	□□□□□ -1.75
PHO88	YBR106W	YNL034W	P53963	612 aa		4.11	□□□□□ -1.75
PHO88	YBR106W	YNL018C	P53976	612 aa		4.11	□□□□□ -1.75
PHO88	YBR106W	YDL121C	Q07541	149 aa		4.11	□□□□□ -1.75
PHO88	YBR106W	KCS1	Q12494	1050 aa		4.11	□□□□□ -1.75
PHO88	YBR106W	CYC7	P00045	113 aa		4.1	□□□□□ -1.75
PHO88	YBR106W	SPE1	P08432	466 aa		4.1	□□□□□ -1.75
PHO88	YBR106W	HCA4	P20448	770 aa	Known RBP	4.1	□□□□□ -1.75
PHO88	YBR106W	DGR2	P32330	852 aa		4.1	□□□□□ -1.75
PHO88	YBR106W	MNN4	P36044	1178 aa		4.1	□□□□□ -1.75
PHO88	YBR106W	YKR051W	P36142	418 aa		4.1	□□□□□ -1.75
PHO88	YBR106W	HXT6	P39003	570 aa	Known RBP	4.1	□□□□□ -1.75
PHO88	YBR106W	HXT7	P39004	570 aa		4.1	□□□□□ -1.75
PHO88	YBR106W	SAW1	P39735	261 aa		4.1	□□□□□ -1.75
PHO88	YBR106W	HIS6	P40545	261 aa		4.1	□□□□□ -1.75
PHO88	YBR106W	URM1	P40554	99 aa	Predicted RBP	4.1	□□□□□ -1.75
PHO88	YBR106W	SNO2	P53823	222 aa		4.1	□□□□□ -1.75
PHO88	YBR106W	REC102	Q02721	264 aa		4.1	□□□□□ -1.75
PHO88	YBR106W	PPN1	Q04119	674 aa		4.1	□□□□□ -1.75
PHO88	YBR106W	MED7	Q08278	222 aa		4.1	□□□□□ -1.75
PHO88	YBR106W	HAL9	Q12180	1030 aa		4.1	□□□□□ -1.75
PHO88	YBR106W	YLR122C	Q12312	125 aa		4.1	□□□□□ -1.75
PHO88	YBR106W	CMP2	P14747	604 aa		4.09	□□□□□ -1.75
PHO88	YBR106W	HOP1	P20050	605 aa		4.09	□□□□□ -1.75
PHO88	YBR106W	MIH1	P23748	554 aa		4.09	□□□□□ -1.75
PHO88	YBR106W	MSH1	P25846	959 aa		4.09	□□□□□ -1.75
PHO88	YBR106W	SSH4	P32343	579 aa		4.09	□□□□□ -1.75
PHO88	YBR106W	YBR259W	P38338	688 aa		4.09	□□□□□ -1.75
PHO88	YBR106W	CCT3	P39077	534 aa	Known RBP	4.09	□□□□□ -1.75
PHO88	YBR106W	IES5	P40060	125 aa		4.09	□□□□□ -1.75
PHO88	YBR106W	RSC8	P43609	557 aa	Known RBP	4.09	□□□□□ -1.75
PHO88	YBR106W	MET12	P46151	657 aa		4.09	□□□□□ -1.75
PHO88	YBR106W	SET2	P46995	733 aa	Known RBP	4.09	□□□□□ -1.75
PHO88	YBR106W	YMR210W	Q03649	449 aa		4.09	□□□□□ -1.75
PHO88	YBR106W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
PHO88	YBR106W	PUS1	Q12211	544 aa	Known RBP	4.09	□□□□□ -1.75
PHO88	YBR106W	SWM1	Q12379	170 aa		4.09	□□□□□ -1.75
PHO88	YBR106W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
PHO88	YBR106W	YLR149C	Q99296	730 aa		4.09	□□□□□ -1.75
PHO88	YBR106W	THO2	P53552	1597 aa	Known RBP	4.09	□□□□□ -1.75
PHO88	YBR106W	CYC1	P00044	109 aa	Predicted RBP	4.08	□□□□□ -1.76
PHO88	YBR106W	HIS5	P07172	385 aa		4.08	□□□□□ -1.76
PHO88	YBR106W	SWI6	P09959	803 aa		4.08	□□□□□ -1.76
PHO88	YBR106W	YCK2	P23292	546 aa	Known RBP	4.08	□□□□□ -1.76
PHO88	YBR106W	PRP22	P24384	1145 aa	Known RBP	4.08	□□□□□ -1.76
PHO88	YBR106W	PET309	P32522	965 aa	Predicted RBP	4.08	□□□□□ -1.76
PHO88	YBR106W	RPD3	P32561	433 aa		4.08	□□□□□ -1.76
PHO88	YBR106W	SGS1	P35187	1447 aa		4.08	□□□□□ -1.76
PHO88	YBR106W	ABZ1	P37254	787 aa	Predicted RBP	4.08	□□□□□ -1.76
PHO88	YBR106W	KTR4	P38131	464 aa		4.08	□□□□□ -1.76
PHO88	YBR106W	APN2	P38207	520 aa		4.08	□□□□□ -1.76
PHO88	YBR106W	PPE1	P38796	400 aa		4.08	□□□□□ -1.76
PHO88	YBR106W	BEM4	P39011	633 aa		4.08	□□□□□ -1.76
PHO88	YBR106W	ECM1	P39715	212 aa		4.08	□□□□□ -1.76
PHO88	YBR106W	SLN1	P39928	1220 aa	Predicted RBP	4.08	□□□□□ -1.76
PHO88	YBR106W	ACA1	P39970	489 aa		4.08	□□□□□ -1.76
PHO88	YBR106W	TAF1	P46677	1066 aa		4.08	□□□□□ -1.76
PHO88	YBR106W	BUD4	P47136	1447 aa		4.08	□□□□□ -1.76
PHO88	YBR106W	YGR130C	P53278	816 aa		4.08	□□□□□ -1.76
PHO88	YBR106W	SSL1	Q04673	461 aa	Predicted RBP	4.08	□□□□□ -1.76
PHO88	YBR106W	SGD1	Q06132	899 aa		4.08	□□□□□ -1.76
PHO88	YBR106W	DCS2	Q12123	353 aa		4.08	□□□□□ -1.76
PHO88	YBR106W	REV3	P14284	1504 aa		4.07	□□□□□ -1.76
PHO88	YBR106W	MDS3	P53094	1487 aa		4.07	□□□□□ -1.76
PHO88	YBR106W	AKL1	P38080	1108 aa	Known RBP	4.07	□□□□□ -1.76
PHO88	YBR106W	YHL041W	P38730	149 aa		4.07	□□□□□ -1.76
PHO88	YBR106W	YHR202W	P38887	602 aa		4.07	□□□□□ -1.76
PHO88	YBR106W	RRP8	P38961	392 aa	Known RBP	4.07	□□□□□ -1.76
PHO88	YBR106W	SAP185	P40856	1058 aa		4.07	□□□□□ -1.76
PHO88	YBR106W	CHA4	P43634	648 aa		4.07	□□□□□ -1.76
PHO88	YBR106W	ASK10	P48361	1146 aa		4.07	□□□□□ -1.76
PHO88	YBR106W	PKH1	Q03407	766 aa		4.07	□□□□□ -1.76
PHO88	YBR106W	RXT3	Q07458	294 aa		4.07	□□□□□ -1.76
PHO88	YBR106W	TPO1	Q07824	586 aa		4.07	□□□□□ -1.76
PHO88	YBR106W	LPX1	Q12405	387 aa	Known RBP	4.07	□□□□□ -1.76
PHO88	YBR106W	TUF1	P02992	437 aa	Known RBP	4.06	□□□□□ -1.76
PHO88	YBR106W	GAL10	P04397	699 aa		4.06	□□□□□ -1.76
PHO88	YBR106W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
PHO88	YBR106W	PET127	P32606	800 aa		4.06	□□□□□ -1.76
PHO88	YBR106W	MFT1	P33441	392 aa	Known RBP	4.06	□□□□□ -1.76
PHO88	YBR106W	SAK1	P38990	1142 aa		4.06	□□□□□ -1.76
PHO88	YBR106W	DUN1	P39009	513 aa		4.06	□□□□□ -1.76
PHO88	YBR106W	STL1	P39932	569 aa		4.06	□□□□□ -1.76
PHO88	YBR106W	EXG2	P52911	562 aa		4.06	□□□□□ -1.76
PHO88	YBR106W	TEP1	P53916	434 aa		4.06	□□□□□ -1.76
PHO88	YBR106W	NOP15	P53927	220 aa	Predicted RBP	4.06	□□□□□ -1.76
PHO88	YBR106W	NSE5	Q03718	556 aa		4.06	□□□□□ -1.76
PHO88	YBR106W	MCM21	Q06675	368 aa		4.06	□□□□□ -1.76
PHO88	YBR106W	OPY2	Q06810	360 aa		4.06	□□□□□ -1.76
PHO88	YBR106W	ADY3	Q07732	790 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 30.9 ms