RNA–Protein interactions for RNA: YBL031W

SHE1, Transcript of Mitotic spindle protein, yeast

Gene SHE1, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE1	YBL031W	TY1B-BR	Q12193	1756 aa		5.25	□□□□□ -1.57
SHE1	YBL031W	TY1B-GR3	Q12316	1755 aa		5.25	□□□□□ -1.57
SHE1	YBL031W	TY1B-OR	Q92393	1755 aa		5.25	□□□□□ -1.57
SHE1	YBL031W	YLR358C	O13565	187 aa		5.25	□□□□□ -1.57
SHE1	YBL031W	TUB2	P02557	457 aa	Known RBP	5.25	□□□□□ -1.57
SHE1	YBL031W	SPE1	P08432	466 aa		5.25	□□□□□ -1.57
SHE1	YBL031W	ENA1	P13587	1091 aa		5.25	□□□□□ -1.57
SHE1	YBL031W	CYS3	P31373	394 aa	Known RBP	5.25	□□□□□ -1.57
SHE1	YBL031W	HSL7	P38274	827 aa		5.25	□□□□□ -1.57
SHE1	YBL031W	MND2	P40577	368 aa		5.25	□□□□□ -1.57
SHE1	YBL031W	SHR5	P41912	237 aa		5.25	□□□□□ -1.57
SHE1	YBL031W	ENA2	Q01896	1091 aa		5.25	□□□□□ -1.57
SHE1	YBL031W	LRS4	Q04087	347 aa	Known RBP	5.25	□□□□□ -1.57
SHE1	YBL031W	ATG33	Q06485	197 aa		5.25	□□□□□ -1.57
SHE1	YBL031W	YOR352W	Q08816	343 aa		5.25	□□□□□ -1.57
SHE1	YBL031W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.25	□□□□□ -1.57	not detected
SHE1	YBL031W	ENA5	Q12691	1091 aa		5.25	□□□□□ -1.57
SHE1	YBL031W	GCN2	P15442	1659 aa		5.24	□□□□□ -1.57
SHE1	YBL031W	CYC1	P00044	109 aa	Predicted RBP	5.24	□□□□□ -1.57
SHE1	YBL031W	PRC1	P00729	532 aa		5.24	□□□□□ -1.57
SHE1	YBL031W	RPP0	P05317	312 aa	Known RBP	5.24	□□□□□ -1.57
SHE1	YBL031W	HMG1	P12683	1054 aa		5.24	□□□□□ -1.57
SHE1	YBL031W	CKB2	P38930	258 aa		5.24	□□□□□ -1.57
SHE1	YBL031W	YRB30	P53107	440 aa	Predicted RBP	5.24	□□□□□ -1.57
SHE1	YBL031W	PBP1	P53297	722 aa	Known RBP	5.24	□□□□□ -1.57
SHE1	YBL031W	CLU1	Q03690	1277 aa	Known RBP	5.24	□□□□□ -1.57
SHE1	YBL031W	MTQ2	Q03920	221 aa	Predicted RBP	5.24	□□□□□ -1.57
SHE1	YBL031W	GIN4	Q12263	1142 aa		5.24	□□□□□ -1.57
SHE1	YBL031W	RAV1	P47104	1357 aa		5.24	□□□□□ -1.57
SHE1	YBL031W	GAL10	P04397	699 aa		5.23	□□□□□ -1.57
SHE1	YBL031W	YCL002C	P25565	263 aa		5.23	□□□□□ -1.57
SHE1	YBL031W	PRP19	P32523	503 aa	Known RBP	5.23	□□□□□ -1.57
SHE1	YBL031W	POA1	P38218	177 aa		5.23	□□□□□ -1.57
SHE1	YBL031W	YJR096W	P47137	282 aa		5.23	□□□□□ -1.57
SHE1	YBL031W	THI21	Q08975	551 aa		5.23	□□□□□ -1.57
SHE1	YBL031W	PNS1	Q12412	539 aa		5.23	□□□□□ -1.57
SHE1	YBL031W	TMA17	Q12513	150 aa		5.23	□□□□□ -1.57
SHE1	YBL031W	YIL108W	P40483	696 aa	Known RBP	5.22	□□□□□ -1.57
SHE1	YBL031W	GPP1	P41277	250 aa	Known RBP	5.22	□□□□□ -1.57
SHE1	YBL031W	GZF3	P42944	551 aa	Known RBP	5.22	□□□□□ -1.57
SHE1	YBL031W	DUS1	P53759	423 aa	Known RBP	5.22	□□□□□ -1.57
SHE1	YBL031W	PDS5	Q04264	1277 aa		5.22	□□□□□ -1.57
SHE1	YBL031W	YDR338C	Q05497	695 aa		5.22	□□□□□ -1.57
SHE1	YBL031W	SGD1	Q06132	899 aa		5.22	□□□□□ -1.57
SHE1	YBL031W	ADY3	Q07732	790 aa		5.22	□□□□□ -1.57
SHE1	YBL031W	TRE2	Q08693	809 aa		5.22	□□□□□ -1.57
SHE1	YBL031W	YTM1	Q12024	460 aa	Predicted RBP	5.22	□□□□□ -1.57
SHE1	YBL031W	YOR022C	Q12204	715 aa		5.22	□□□□□ -1.57
SHE1	YBL031W	GDB1	Q06625	1536 aa		5.22	□□□□□ -1.57
SHE1	YBL031W	ARO1	P08566	1588 aa	Known RBP	5.21	□□□□□ -1.57
SHE1	YBL031W	FBP1	P09201	348 aa		5.21	□□□□□ -1.58
SHE1	YBL031W	CTS1	P29029	562 aa		5.21	□□□□□ -1.58
SHE1	YBL031W	PRS1	P32895	427 aa	Known RBP	5.21	□□□□□ -1.58
SHE1	YBL031W	CTF8	P38877	133 aa		5.21	□□□□□ -1.58
SHE1	YBL031W	YFL052W	P43551	465 aa		5.21	□□□□□ -1.58
SHE1	YBL031W	RET2	P43621	546 aa		5.21	□□□□□ -1.58
SHE1	YBL031W	BNA2	P47125	453 aa		5.21	□□□□□ -1.58
SHE1	YBL031W	AIM14	P53109	570 aa		5.21	□□□□□ -1.58
SHE1	YBL031W	NPY1	P53164	384 aa		5.21	□□□□□ -1.58
SHE1	YBL031W	HAL9	Q12180	1030 aa		5.21	□□□□□ -1.58
SHE1	YBL031W	TY1B-JR2	P47100	1755 aa	Known RBP	5.2	□□□□□ -1.58
SHE1	YBL031W	TY1B-ER2	Q03619	1755 aa		5.2	□□□□□ -1.58
SHE1	YBL031W	TY1B-MR1	Q04214	1755 aa		5.2	□□□□□ -1.58
SHE1	YBL031W	TY1B-MR2	Q04670	1755 aa	Known RBP	5.2	□□□□□ -1.58
SHE1	YBL031W	TY1B-LR1	Q12088	1755 aa	Known RBP	5.2	□□□□□ -1.58
SHE1	YBL031W	TY1B-NL1	Q12112	1755 aa		5.2	□□□□□ -1.58
SHE1	YBL031W	TY1B-GR1	Q12141	1755 aa		5.2	□□□□□ -1.58
SHE1	YBL031W	TY1B-BL	Q12490	1755 aa		5.2	□□□□□ -1.58
SHE1	YBL031W	MIH1	P23748	554 aa		5.2	□□□□□ -1.58
SHE1	YBL031W	CCR4	P31384	837 aa	Known RBP	5.2	□□□□□ -1.58
SHE1	YBL031W	RPD3	P32561	433 aa		5.2	□□□□□ -1.58
SHE1	YBL031W	URM1	P40554	99 aa	Predicted RBP	5.2	□□□□□ -1.58
SHE1	YBL031W	YJR008W	P47085	338 aa		5.2	□□□□□ -1.58
SHE1	YBL031W	SPT20	P50875	604 aa		5.2	□□□□□ -1.58
SHE1	YBL031W	ZIP2	P53061	704 aa		5.2	□□□□□ -1.58
SHE1	YBL031W	FOL1	P53848	824 aa		5.2	□□□□□ -1.58
SHE1	YBL031W	TPO1	Q07824	586 aa		5.2	□□□□□ -1.58
SHE1	YBL031W	RPO21	P04050	1733 aa	Known RBP	5.2	□□□□□ -1.58
SHE1	YBL031W	RPA190	P10964	1664 aa	Known RBP	5.19	□□□□□ -1.58
SHE1	YBL031W	YBT1	P32386	1661 aa		5.19	□□□□□ -1.58
SHE1	YBL031W	GRX7	P38068	203 aa		5.19	□□□□□ -1.58
SHE1	YBL031W	YBR071W	P38243	211 aa		5.19	□□□□□ -1.58
SHE1	YBL031W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	not detected
SHE1	YBL031W	SDP1	P40479	209 aa		5.19	□□□□□ -1.58
SHE1	YBL031W	DUG1	P43616	481 aa	Known RBP	5.19	□□□□□ -1.58
SHE1	YBL031W	MET12	P46151	657 aa		5.19	□□□□□ -1.58
SHE1	YBL031W	YGR153W	P48238	217 aa		5.19	□□□□□ -1.58
SHE1	YBL031W	SSL1	Q04673	461 aa	Predicted RBP	5.19	□□□□□ -1.58
SHE1	YBL031W	CRR1	Q05790	422 aa		5.19	□□□□□ -1.58
SHE1	YBL031W	TY3B-I	Q7LHG5	1498 aa	Known RBP	5.19	□□□□□ -1.58
SHE1	YBL031W	NTE1	Q04958	1679 aa		5.18	□□□□□ -1.58
SHE1	YBL031W	TRM3	Q07527	1436 aa		5.18	□□□□□ -1.58
SHE1	YBL031W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
SHE1	YBL031W	EUG1	P32474	517 aa		5.18	□□□□□ -1.58
SHE1	YBL031W	YKR018C	P36114	725 aa		5.18	□□□□□ -1.58
SHE1	YBL031W	TDA3	P38758	523 aa		5.18	□□□□□ -1.58
SHE1	YBL031W	YHR078W	P38799	552 aa		5.18	□□□□□ -1.58
SHE1	YBL031W	LAM1	P38851	1228 aa		5.18	□□□□□ -1.58
SHE1	YBL031W	OAF1	P39720	1047 aa	Predicted RBP	5.18	□□□□□ -1.58
SHE1	YBL031W	MNN11	P46985	422 aa	Known RBP	5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms