RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C YKL091CP33324 310 aaKnown RBP7.43□□□□□ -1.22
LDB7YBL006C DUG2P38149 878 aa7.43□□□□□ -1.22
LDB7YBL006C HER2Q03557 464 aa7.43□□□□□ -1.22
LDB7YBL006C RLP24Q07915 199 aaKnown RBP7.43□□□□□ -1.22
LDB7YBL006C YPR027CQ12079 277 aa7.43□□□□□ -1.22
LDB7YBL006C GIS3Q12418 502 aa7.43□□□□□ -1.22
LDB7YBL006C IME1P21190 360 aa7.42□□□□□ -1.22
LDB7YBL006C SGF29P25554 259 aa7.42□□□□□ -1.22
LDB7YBL006C YBR056WP38081 501 aa7.42□□□□□ -1.22
LDB7YBL006C RGD1P38339 666 aa7.42□□□□□ -1.22
LDB7YBL006C SMC3P47037 1230 aa7.42□□□□□ -1.22
LDB7YBL006C PSP1P50896 841 aaKnown RBP7.42□□□□□ -1.22
LDB7YBL006C LSC2P53312 427 aa7.42□□□□□ -1.22
LDB7YBL006C YHM2Q04013 314 aa7.42□□□□□ -1.22
LDB7YBL006C RPS14AP06367 137 aaKnown RBP7.41□□□□□ -1.22
LDB7YBL006C MAK16P10962 306 aaPredicted RBP7.41□□□□□ -1.22
LDB7YBL006C GAC1P28006 793 aa7.41□□□□□ -1.22
LDB7YBL006C RAD16P31244 790 aa7.41□□□□□ -1.22
LDB7YBL006C MET4P32389 672 aa7.41□□□□□ -1.22
LDB7YBL006C SWI3P32591 825 aa7.41□□□□□ -1.22
LDB7YBL006C YKT6P36015 200 aaKnown RBP7.41□□□□□ -1.22
LDB7YBL006C YKR051WP36142 418 aa7.41□□□□□ -1.22
LDB7YBL006C POL12P38121 705 aaPredicted RBP7.41□□□□□ -1.22
LDB7YBL006C SHE3P38272 425 aaKnown RBP7.41□□□□□ -1.22
LDB7YBL006C RPS14BP39516 138 aaKnown RBP7.41□□□□□ -1.22
LDB7YBL006C VPS25P47142 202 aa7.41□□□□□ -1.22
LDB7YBL006C ALT1P52893 592 aa7.41□□□□□ -1.22
LDB7YBL006C SFB2P53953 876 aa7.41□□□□□ -1.22
LDB7YBL006C YNL011CP53980 444 aa7.41□□□□□ -1.22
LDB7YBL006C TBF1Q02457 562 aa7.41□□□□□ -1.22
LDB7YBL006C TMN2Q04562 672 aa7.41□□□□□ -1.22
LDB7YBL006C PRM6Q04705 352 aa7.41□□□□□ -1.22
LDB7YBL006C NSE1Q07913 336 aa7.41□□□□□ -1.22
LDB7YBL006C YOL075CQ08234 1294 aa7.41□□□□□ -1.22
LDB7YBL006C YPQ1Q12010 308 aa7.41□□□□□ -1.22
LDB7YBL006C TAF10Q12030 206 aa7.41□□□□□ -1.22
LDB7YBL006C SLX4Q12098 748 aa7.41□□□□□ -1.22
LDB7YBL006C OM45P16547 393 aa7.4□□□□□ -1.22
LDB7YBL006C CDC42P19073 191 aa7.4□□□□□ -1.22
LDB7YBL006C STE11P23561 717 aa7.4□□□□□ -1.22
LDB7YBL006C SAC6P32599 642 aaKnown RBP7.4□□□□□ -1.22
LDB7YBL006C TKL2P33315 681 aa7.4□□□□□ -1.22
LDB7YBL006C SEG2P34250 1132 aa7.4□□□□□ -1.22
LDB7YBL006C KDX1P36005 433 aa7.4□□□□□ -1.22
LDB7YBL006C SAH1P39954 449 aaKnown RBP7.4□□□□□ -1.22
LDB7YBL006C KAP123P40069 1113 aaKnown RBP7.4□□□□□ -1.22
LDB7YBL006C HYR1P40581 163 aaKnown RBP7.4□□□□□ -1.22
LDB7YBL006C FIG4P42837 879 aa7.4□□□□□ -1.22
LDB7YBL006C ZAP1P47043 880 aa7.4□□□□□ -1.22
LDB7YBL006C ATH1P48016 1211 aa7.4□□□□□ -1.22
LDB7YBL006C YPT11P48559 417 aa7.4□□□□□ -1.22
LDB7YBL006C UTP8P53276 713 aaKnown RBP7.4□□□□□ -1.22
LDB7YBL006C HST1P53685 503 aa7.4□□□□□ -1.22
LDB7YBL006C RPA49Q01080 415 aaPredicted RBP7.4□□□□□ -1.22
LDB7YBL006C WAR1Q03631 944 aa7.4□□□□□ -1.22
LDB7YBL006C BSP1Q06604 576 aa7.4□□□□□ -1.22
LDB7YBL006C ABP140Q08641 628 aaKnown RBP7.4□□□□□ -1.22
LDB7YBL006C GPM2Q12008 311 aa7.4□□□□□ -1.22
LDB7YBL006C FAL1Q12099 399 aaKnown RBP7.4□□□□□ -1.22
LDB7YBL006C PDH1Q12428 516 aaKnown RBP7.4□□□□□ -1.22
LDB7YBL006C DDP1Q99321 188 aaKnown RBP7.4□□□□□ -1.22
LDB7YBL006C GAL10P04397 699 aa7.39□□□□□ -1.23
LDB7YBL006C CAN1P04817 590 aa7.39□□□□□ -1.23
LDB7YBL006C MTF1P14908 341 aaKnown RBP7.39□□□□□ -1.23
LDB7YBL006C SIR1P21691 654 aa7.39□□□□□ -1.23
LDB7YBL006C SCJ1P25303 377 aa7.39□□□□□ -1.23
LDB7YBL006C SAT4P25333 603 aaKnown RBP7.39□□□□□ -1.23
LDB7YBL006C HCM1P25364 564 aa7.39□□□□□ -1.23
LDB7YBL006C RRT12P25381 491 aa7.39□□□□□ -1.23
LDB7YBL006C ELM1P32801 640 aa7.39□□□□□ -1.23
LDB7YBL006C BDH2P39713 417 aa7.39□□□□□ -1.23
LDB7YBL006C IES1P43579 692 aa7.39□□□□□ -1.23
LDB7YBL006C TUB4P53378 473 aa7.39□□□□□ -1.23
LDB7YBL006C RGA2Q06407 1009 aa7.39□□□□□ -1.23
LDB7YBL006C SPP382Q06411 708 aaPredicted RBP7.39□□□□□ -1.23
LDB7YBL006C IWR1Q07532 353 aaPredicted RBP7.39□□□□□ -1.23
LDB7YBL006C ACC1Q00955 2233 aaKnown RBP7.38□□□□□ -1.23
LDB7YBL006C COX11P19516 300 aaKnown RBP7.38□□□□□ -1.23
LDB7YBL006C RNR1P21524 888 aaKnown RBP7.38□□□□□ -1.23
LDB7YBL006C PSO2P30620 661 aa7.38□□□□□ -1.23
LDB7YBL006C FRE1P32791 686 aa7.38□□□□□ -1.23
LDB7YBL006C YER130CP39959 443 aa7.38□□□□□ -1.23
LDB7YBL006C BTT1P40314 149 aaPredicted RBP7.38□□□□□ -1.23
LDB7YBL006C CPR7P47103 393 aa7.38□□□□□ -1.23
LDB7YBL006C YJR054WP47114 497 aa7.38□□□□□ -1.23
LDB7YBL006C MUB1Q03162 620 aa7.38□□□□□ -1.23
LDB7YBL006C CEF1Q03654 590 aaPredicted RBP7.38□□□□□ -1.23
LDB7YBL006C PPM1Q04081 328 aa7.38□□□□□ -1.23
LDB7YBL006C RPS9AO13516 197 aaKnown RBP7.37□□□□□ -1.23
LDB7YBL006C GPA1P08539 472 aa7.37□□□□□ -1.23
LDB7YBL006C PPH22P23595 377 aa7.37□□□□□ -1.23
LDB7YBL006C MRM1P25270 412 aa7.37□□□□□ -1.23
LDB7YBL006C KIP1P28742 1111 aa7.37□□□□□ -1.23
LDB7YBL006C CDC11P32458 415 aa7.37□□□□□ -1.23
LDB7YBL006C TSA1P34760 196 aaKnown RBP7.37□□□□□ -1.23
LDB7YBL006C BCD1P38772 366 aa7.37□□□□□ -1.23
LDB7YBL006C MED6P38782 295 aa7.37□□□□□ -1.23
LDB7YBL006C DSE1P40077 573 aa7.37□□□□□ -1.23
LDB7YBL006C LSB3P43603 459 aaKnown RBP7.37□□□□□ -1.23
LDB7YBL006C AIP1P46680 615 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 51.4 ms