RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C LCB2P40970 561 aa4.31□□□□□ -1.72
PTA1YAL043C TAF1P46677 1066 aa4.31□□□□□ -1.72
PTA1YAL043C TY4A-JP47023 414 aa4.31□□□□□ -1.72
PTA1YAL043C YGR021WP53212 290 aa4.31□□□□□ -1.72
PTA1YAL043C GTR1Q00582 310 aa4.31□□□□□ -1.72
PTA1YAL043C BET4Q00618 327 aa4.31□□□□□ -1.72
PTA1YAL043C ERO1Q03103 563 aa4.31□□□□□ -1.72
PTA1YAL043C FRA1Q07825 749 aa4.31□□□□□ -1.72
PTA1YAL043C PSF3Q12146 194 aa4.31□□□□□ -1.72
PTA1YAL043C PUS1Q12211 544 aaKnown RBP4.31□□□□□ -1.72
PTA1YAL043C GRX6Q12438 231 aa4.31□□□□□ -1.72
PTA1YAL043C RRD2Q12461 358 aa4.31□□□□□ -1.72
PTA1YAL043C HSC82P15108 705 aaKnown RBP4.31□□□□□ -1.72
PTA1YAL043C SRV2P17555 526 aaKnown RBP4.31□□□□□ -1.72
PTA1YAL043C CKA2P19454 339 aa4.31□□□□□ -1.72
PTA1YAL043C GLN1P32288 370 aaKnown RBP4.31□□□□□ -1.72
PTA1YAL043C EFB1P32471 206 aaKnown RBP4.31□□□□□ -1.72
PTA1YAL043C SIC1P38634 284 aa4.31□□□□□ -1.72
PTA1YAL043C KEL1P38853 1164 aaKnown RBP4.31□□□□□ -1.72
PTA1YAL043C INA22P40576 216 aa4.31□□□□□ -1.72
PTA1YAL043C SUM1P46676 1062 aa4.31□□□□□ -1.72
PTA1YAL043C HSH155P49955 971 aaKnown RBP4.31□□□□□ -1.72
PTA1YAL043C CNM67P53865 581 aaKnown RBP4.31□□□□□ -1.72
PTA1YAL043C ATP25Q03153 612 aa4.31□□□□□ -1.72
PTA1YAL043C YMR018WQ04364 514 aa4.31□□□□□ -1.72
PTA1YAL043C FAR8Q05040 523 aa4.31□□□□□ -1.72
PTA1YAL043C LCB5Q06147 687 aaKnown RBP4.31□□□□□ -1.72
PTA1YAL043C SKG3Q06315 1026 aa4.31□□□□□ -1.72
PTA1YAL043C ACK1Q07622 623 aaPredicted RBP4.31□□□□□ -1.72
PTA1YAL043C TCO89Q08921 799 aa4.31□□□□□ -1.72
PTA1YAL043C RTP1Q12751 981 aa4.31□□□□□ -1.72
PTA1YAL043C MAK16P10962 306 aaPredicted RBP4.3□□□□□ -1.72
PTA1YAL043C SPO16P17122 198 aa4.3□□□□□ -1.72
PTA1YAL043C DBP5P20449 482 aaKnown RBP4.3□□□□□ -1.72
PTA1YAL043C RAD51P25454 400 aa4.3□□□□□ -1.72
PTA1YAL043C ATG19P35193 415 aa4.3□□□□□ -1.72
PTA1YAL043C UBP11P36026 717 aa4.3□□□□□ -1.72
PTA1YAL043C RRP14P36080 434 aaKnown RBP4.3□□□□□ -1.72
PTA1YAL043C ERP5P38819 212 aa4.3□□□□□ -1.72
PTA1YAL043C RNR4P49723 345 aaKnown RBP4.3□□□□□ -1.72
PTA1YAL043C MTC3P53077 123 aa4.3□□□□□ -1.72
PTA1YAL043C YNL144CP53907 740 aa4.3□□□□□ -1.72
PTA1YAL043C VTC3Q02725 835 aa4.3□□□□□ -1.72
PTA1YAL043C TFB2Q02939 513 aa4.3□□□□□ -1.72
PTA1YAL043C PRP3Q03338 469 aaPredicted RBP4.3□□□□□ -1.72
PTA1YAL043C ISA1Q07821 250 aaPredicted RBP4.3□□□□□ -1.72
PTA1YAL043C AIM7Q12156 149 aa4.3□□□□□ -1.72
PTA1YAL043C TUS1Q06412 1307 aa4.3□□□□□ -1.72
PTA1YAL043C SRD1P09007 221 aa4.29□□□□□ -1.72
PTA1YAL043C SNT1P25357 1226 aa4.29□□□□□ -1.72
PTA1YAL043C MUD1P32605 298 aaKnown RBP4.29□□□□□ -1.72
PTA1YAL043C PIN4P34217 668 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
PTA1YAL043C BLI1P35727 113 aa4.29□□□□□ -1.72
PTA1YAL043C NAB3P38996 802 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
PTA1YAL043C OAF1P39720 1047 aaPredicted RBP4.29□□□□□ -1.72
PTA1YAL043C MGS1P40151 587 aa4.29□□□□□ -1.72
PTA1YAL043C NCS2P53923 493 aaPredicted RBP4.29□□□□□ -1.72
PTA1YAL043C RPA49Q01080 415 aaPredicted RBP4.29□□□□□ -1.72
PTA1YAL043C MEH1Q02205 184 aa4.29□□□□□ -1.72
PTA1YAL043C INA17Q02888 182 aa4.29□□□□□ -1.72
PTA1YAL043C TDA9Q04545 1251 aa4.29□□□□□ -1.72
PTA1YAL043C YLR177WQ06251 628 aa4.29□□□□□ -1.72
PTA1YAL043C OSW1Q08692 278 aa4.29□□□□□ -1.72
PTA1YAL043C CBP1P07252 654 aa4.29□□□□□ -1.72
PTA1YAL043C AAD3P25612 363 aa4.29□□□□□ -1.72
PTA1YAL043C DBF4P32325 704 aa4.29□□□□□ -1.72
PTA1YAL043C STE13P33894 931 aa4.29□□□□□ -1.72
PTA1YAL043C CCL1P37366 393 aa4.29□□□□□ -1.72
PTA1YAL043C UBP13P38187 747 aa4.29□□□□□ -1.72
PTA1YAL043C YSW1P38280 609 aa4.29□□□□□ -1.72
PTA1YAL043C END3P39013 349 aa4.29□□□□□ -1.72
PTA1YAL043C SBE2P42223 864 aaKnown RBP4.29□□□□□ -1.72
PTA1YAL043C YJL107CP42947 387 aa4.29□□□□□ -1.72
PTA1YAL043C ERP6P53198 216 aa4.29□□□□□ -1.72
PTA1YAL043C KIN4Q01919 800 aa4.29□□□□□ -1.72
PTA1YAL043C RCF1Q03713 159 aa4.29□□□□□ -1.72
PTA1YAL043C DUS3Q06053 668 aaKnown RBP4.29□□□□□ -1.72
PTA1YAL043C CMS1Q07897 291 aaKnown RBP4.29□□□□□ -1.72
PTA1YAL043C PCL8Q08966 492 aa4.29□□□□□ -1.72
PTA1YAL043C STB3Q12427 513 aa4.29□□□□□ -1.72
PTA1YAL043C YEL077CQ3E7X8 1277 aa4.29□□□□□ -1.72
PTA1YAL043C RAS1P01119 309 aa4.28□□□□□ -1.72
PTA1YAL043C RPL24AP04449 155 aaKnown RBP4.28□□□□□ -1.72
PTA1YAL043C FBP1P09201 348 aa4.28□□□□□ -1.72
PTA1YAL043C GAL11P19659 1081 aa4.28□□□□□ -1.72
PTA1YAL043C REC107P21651 314 aa4.28□□□□□ -1.72
PTA1YAL043C VPS34P22543 875 aa4.28□□□□□ -1.72
PTA1YAL043C RPC19P28000 142 aaKnown RBP4.28□□□□□ -1.72
PTA1YAL043C MVD1P32377 396 aaKnown RBP4.28□□□□□ -1.72
PTA1YAL043C PLC1P32383 869 aa4.28□□□□□ -1.72
PTA1YAL043C PGM1P33401 570 aaKnown RBP4.28□□□□□ -1.72
PTA1YAL043C HEK2P38199 381 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72 RIP-Chip
PTA1YAL043C PHO88P38264 188 aaPredicted RBP4.28□□□□□ -1.72
PTA1YAL043C ALA1P40825 983 aaKnown RBP4.28□□□□□ -1.72
PTA1YAL043C RSC8P43609 557 aaKnown RBP4.28□□□□□ -1.72
PTA1YAL043C YMR187CQ03236 431 aa4.28□□□□□ -1.72
PTA1YAL043C OYE2Q03558 400 aaKnown RBP4.28□□□□□ -1.72
PTA1YAL043C TSR1Q07381 788 aaKnown RBP4.28□□□□□ -1.72
PTA1YAL043C WHI4Q07655 649 aaKnown RBP4.28□□□□□ -1.72
PTA1YAL043C CLF1Q12309 687 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 34 ms