RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 ELP3Q9H9T3 547 aa5.94□□□□□ -1.46
ATM-230ENST00000640388 CECR2Q9BXF3 1484 aa5.94□□□□□ -1.46
ATM-230ENST00000640388 ALBP02768 609 aa5.93□□□□□ -1.46
ATM-230ENST00000640388 NRLP54845 237 aa5.93□□□□□ -1.46
ATM-230ENST00000640388 ECM1Q16610 540 aa5.93□□□□□ -1.46
ATM-230ENST00000640388 PDE12Q6L8Q7 609 aaKnown RBP5.93□□□□□ -1.46
ATM-230ENST00000640388 C8orf86Q6ZUL3 223 aa5.93□□□□□ -1.46
ATM-230ENST00000640388 MICALL1Q8N3F8 863 aa5.93□□□□□ -1.46
ATM-230ENST00000640388 NUDT8Q8WV74 236 aa5.93□□□□□ -1.46
ATM-230ENST00000640388 NSUN5Q96P11 429 aaKnown RBP5.93□□□□□ -1.46
ATM-230ENST00000640388 TMEM63CQ9P1W3 806 aa5.93□□□□□ -1.46
ATM-230ENST00000640388 NAGPAQ9UK23 515 aa5.93□□□□□ -1.46
ATM-230ENST00000640388 GNEQ9Y223 722 aaKnown RBP5.93□□□□□ -1.46
ATM-230ENST00000640388 SOWAHDA6NJG2 315 aa5.92□□□□□ -1.46
ATM-230ENST00000640388 J3QW42 95 aa5.92□□□□□ -1.46
ATM-230ENST00000640388 USP5P45974 858 aa5.92□□□□□ -1.46
ATM-230ENST00000640388 GPLD1P80108 840 aa5.92□□□□□ -1.46
ATM-230ENST00000640388 ARHGAP4P98171 946 aa5.92□□□□□ -1.46
ATM-230ENST00000640388 KCNA1Q09470 495 aa5.92□□□□□ -1.46
ATM-230ENST00000640388 PSAPL1Q6NUJ1 521 aa5.92□□□□□ -1.46
ATM-230ENST00000640388 OR13H1Q8NG92 308 aa5.92□□□□□ -1.46
ATM-230ENST00000640388 PRDM6Q9NQX0 595 aa5.92□□□□□ -1.46
ATM-230ENST00000640388 ABI2Q9NYB9 513 aaPredicted RBP5.92□□□□□ -1.46
ATM-230ENST00000640388 BRPF3Q9ULD4 1205 aa5.92□□□□□ -1.46
ATM-230ENST00000640388 NISCHQ9Y2I1 1504 aa5.92□□□□□ -1.46
ATM-230ENST00000640388 LOC102724428A0A0B4J2F2 783 aa5.91□□□□□ -1.46
ATM-230ENST00000640388 SPDYE3A6NKU9 549 aa5.91□□□□□ -1.46
ATM-230ENST00000640388 LILRB5O75023 590 aa5.91□□□□□ -1.46
ATM-230ENST00000640388 RGS9O75916 674 aaPredicted RBP5.91□□□□□ -1.46
ATM-230ENST00000640388 EIF2AK2P19525 551 aaKnown RBP5.91□□□□□ -1.46
ATM-230ENST00000640388 SOX18P35713 384 aa5.91□□□□□ -1.46
ATM-230ENST00000640388 SIK1P57059 783 aa5.91□□□□□ -1.46
ATM-230ENST00000640388 PERM1Q5SV97 790 aa5.91□□□□□ -1.46
ATM-230ENST00000640388 ELMSAN1Q6PJG2 1045 aa5.91□□□□□ -1.46
ATM-230ENST00000640388 XKR5Q6UX68 686 aa5.91□□□□□ -1.46
ATM-230ENST00000640388 C20orf204Q6ZNR8 217 aa5.91□□□□□ -1.46
ATM-230ENST00000640388 JPH1Q9HDC5 661 aaPredicted RBP5.91□□□□□ -1.46
ATM-230ENST00000640388 BIN2Q9UBW5 565 aaPredicted RBP5.91□□□□□ -1.46
ATM-230ENST00000640388 IVNS1ABPQ9Y6Y0 642 aa5.91□□□□□ -1.46
ATM-230ENST00000640388 GHRHP01286 108 aa5.9□□□□□ -1.46
ATM-230ENST00000640388 CYP2E1P05181 493 aaPredicted RBP5.9□□□□□ -1.46
ATM-230ENST00000640388 EHHADHQ08426 723 aa5.9□□□□□ -1.46
ATM-230ENST00000640388 COL13A1Q5TAT6 717 aaPredicted RBP5.9□□□□□ -1.46
ATM-230ENST00000640388 AEBP1Q8IUX7 1158 aa5.9□□□□□ -1.46
ATM-230ENST00000640388 PLVAPQ9BX97 442 aa5.9□□□□□ -1.46
ATM-230ENST00000640388 SMG9Q9H0W8 520 aaKnown RBP5.9□□□□□ -1.46
ATM-230ENST00000640388 CNTN3Q9P232 1028 aa5.9□□□□□ -1.46
ATM-230ENST00000640388 NDUFB5O43674 189 aa5.89□□□□□ -1.47
ATM-230ENST00000640388 HOXD8P13378 290 aaPredicted RBP5.89□□□□□ -1.47
ATM-230ENST00000640388 GATA4P43694 442 aa5.89□□□□□ -1.47
ATM-230ENST00000640388 HYAL2Q12891 473 aa5.89□□□□□ -1.47
ATM-230ENST00000640388 GJD3Q8N144 294 aa5.89□□□□□ -1.47
ATM-230ENST00000640388 C1orf127Q8N9H9 656 aa5.89□□□□□ -1.47
ATM-230ENST00000640388 SPACA7Q96KW9 195 aa5.89□□□□□ -1.47
ATM-230ENST00000640388 LPIN3Q9BQK8 851 aa5.89□□□□□ -1.47
ATM-230ENST00000640388 RBSNQ9H1K0 784 aa5.89□□□□□ -1.47
ATM-230ENST00000640388 KANSL3Q9P2N6 904 aa5.89□□□□□ -1.47
ATM-230ENST00000640388 TNFRSF21O75509 655 aa5.88□□□□□ -1.47
ATM-230ENST00000640388 CES1P23141 567 aa5.88□□□□□ -1.47
ATM-230ENST00000640388 AFF1P51825 1210 aaKnown RBP5.88□□□□□ -1.47
ATM-230ENST00000640388 COL9A3Q14050 684 aaPredicted RBP5.88□□□□□ -1.47
ATM-230ENST00000640388 NCAPG2Q86XI2 1143 aa5.88□□□□□ -1.47
ATM-230ENST00000640388 TMC1Q8TDI8 760 aa5.88□□□□□ -1.47
ATM-230ENST00000640388 PLD4Q96BZ4 506 aa5.88□□□□□ -1.47
ATM-230ENST00000640388 FRRS1LQ9P0K9 344 aa5.88□□□□□ -1.47
ATM-230ENST00000640388 FOXD3Q9UJU5 478 aaPredicted RBP5.88□□□□□ -1.47
ATM-230ENST00000640388 PATL2C9JE40 543 aaKnown RBP5.87□□□□□ -1.47
ATM-230ENST00000640388 PHACTR2O75167 634 aa5.87□□□□□ -1.47
ATM-230ENST00000640388 NID1P14543 1247 aa5.87□□□□□ -1.47
ATM-230ENST00000640388 RSPO4Q2I0M5 234 aaPredicted RBP5.87□□□□□ -1.47
ATM-230ENST00000640388 NKAPLQ5M9Q1 402 aa5.87□□□□□ -1.47
ATM-230ENST00000640388 TRAPPC3LQ5T215 181 aa5.87□□□□□ -1.47
ATM-230ENST00000640388 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.87□□□□□ -1.47
ATM-230ENST00000640388 CC2D2AQ9P2K1 1620 aa5.86□□□□□ -1.47
ATM-230ENST00000640388 KIF4AO95239 1232 aa5.86□□□□□ -1.47
ATM-230ENST00000640388 ATP11AP98196 1134 aa5.86□□□□□ -1.47
ATM-230ENST00000640388 DOC2BQ14184 412 aa5.86□□□□□ -1.47
ATM-230ENST00000640388 GRIK5Q16478 980 aa5.86□□□□□ -1.47
ATM-230ENST00000640388 PRRT3Q5FWE3 981 aa5.86□□□□□ -1.47
ATM-230ENST00000640388 GDF6Q6KF10 455 aaPredicted RBP5.86□□□□□ -1.47
ATM-230ENST00000640388 SNX29Q8TEQ0 813 aa5.86□□□□□ -1.47
ATM-230ENST00000640388 TTC9Q92623 222 aa5.86□□□□□ -1.47
ATM-230ENST00000640388 PMEPA1Q969W9 287 aa5.86□□□□□ -1.47
ATM-230ENST00000640388 CITED4Q96RK1 184 aa5.86□□□□□ -1.47
ATM-230ENST00000640388 CHRDQ9H2X0 955 aa5.86□□□□□ -1.47
ATM-230ENST00000640388 SEMA6BQ9H3T3 888 aa5.86□□□□□ -1.47
ATM-230ENST00000640388 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.85□□□□□ -1.47
ATM-230ENST00000640388 EREGO14944 169 aa5.85□□□□□ -1.47
ATM-230ENST00000640388 PDE3BQ13370 1112 aa5.85□□□□□ -1.47
ATM-230ENST00000640388 CEP135Q66GS9 1140 aa5.85□□□□□ -1.47
ATM-230ENST00000640388 DMRTC2Q8IXT2 367 aaPredicted RBP5.85□□□□□ -1.47
ATM-230ENST00000640388 CEP120Q8N960 986 aa5.85□□□□□ -1.47
ATM-230ENST00000640388 NACC1Q96RE7 527 aa5.85□□□□□ -1.47
ATM-230ENST00000640388 RASSF4Q9H2L5 321 aa5.85□□□□□ -1.47
ATM-230ENST00000640388 SALL4Q9UJQ4 1053 aa5.85□□□□□ -1.47
ATM-230ENST00000640388 FAM229AH3BQW9 127 aa5.84□□□□□ -1.47
ATM-230ENST00000640388 SMNDC1O75940 238 aaKnown RBP eCLIP5.84□□□□□ -1.47
ATM-230ENST00000640388 MAPK1P28482 360 aa5.84□□□□□ -1.47
ATM-230ENST00000640388 TRIM28Q13263 835 aaKnown RBP5.84□□□□□ -1.47
ATM-230ENST00000640388 MSL1Q68DK7 614 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms