RNA–Protein interactions for RNA: ENST00000626620.3

KCNMA1-225, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-225ENST00000626620 SMC5Q8IY18 1101 aa13.18□□□□□ -0.3
KCNMA1-225ENST00000626620 BSDC1Q9NW68 430 aaPredicted RBP13.18□□□□□ -0.3
KCNMA1-225ENST00000626620 FBXO3Q9UK99 471 aa13.18□□□□□ -0.3
KCNMA1-225ENST00000626620 IFIT5Q13325 482 aaKnown RBP13.18□□□□□ -0.3
KCNMA1-225ENST00000626620 RBM17Q96I25 401 aaKnown RBP13.18□□□□□ -0.3
KCNMA1-225ENST00000626620 ANKRD18BA2A2Z9 1011 aa13.17□□□□□ -0.3
KCNMA1-225ENST00000626620 H0YIN7 160 aa13.17□□□□□ -0.3
KCNMA1-225ENST00000626620 PRELPP51888 382 aa13.17□□□□□ -0.3
KCNMA1-225ENST00000626620 KLHL34Q8N239 644 aa13.17□□□□□ -0.3
KCNMA1-225ENST00000626620 RPS8P62241 208 aaKnown RBP13.17□□□□□ -0.3
KCNMA1-225ENST00000626620 WTIPA6NIX2 430 aaPredicted RBP13.17□□□□□ -0.3
KCNMA1-225ENST00000626620 MINPP1Q9UNW1 487 aa13.16□□□□□ -0.3
KCNMA1-225ENST00000626620 ADAMTSL1Q8N6G6 1762 aa13.16□□□□□ -0.3
KCNMA1-225ENST00000626620 COL4A5P29400 1685 aa13.16□□□□□ -0.3
KCNMA1-225ENST00000626620 EYA2O00167 538 aa13.16□□□□□ -0.3
KCNMA1-225ENST00000626620 BBOX1O75936 387 aa13.16□□□□□ -0.3
KCNMA1-225ENST00000626620 CCDC57Q2TAC2 916 aa13.16□□□□□ -0.3
KCNMA1-225ENST00000626620 PPP4R2Q9NY27 417 aa13.16□□□□□ -0.3
KCNMA1-225ENST00000626620 B4GALNT3Q6L9W6 998 aa13.16□□□□□ -0.3
KCNMA1-225ENST00000626620 PRPF40BQ6NWY9 871 aaKnown RBP13.16□□□□□ -0.3
KCNMA1-225ENST00000626620 OLFM4Q6UX06 510 aa13.16□□□□□ -0.3
KCNMA1-225ENST00000626620 DDX46Q7L014 1031 aaKnown RBP13.16□□□□□ -0.3
KCNMA1-225ENST00000626620 ATP6V0A2Q9Y487 856 aa13.16□□□□□ -0.3
KCNMA1-225ENST00000626620 FGFR2P21802 821 aa13.15□□□□□ -0.3
KCNMA1-225ENST00000626620 PSME4Q14997 1843 aa13.15□□□□□ -0.3
KCNMA1-225ENST00000626620 ALDH1B1P30837 517 aa13.15□□□□□ -0.3
KCNMA1-225ENST00000626620 SP8Q8IXZ3 490 aa13.15□□□□□ -0.3
KCNMA1-225ENST00000626620 RPGRQ92834 1020 aaKnown RBP13.15□□□□□ -0.3
KCNMA1-225ENST00000626620 PODXL2Q9NZ53 605 aa13.15□□□□□ -0.3
KCNMA1-225ENST00000626620 SALL3Q9BXA9 1300 aa13.15□□□□□ -0.3
KCNMA1-225ENST00000626620 AKAP11Q9UKA4 1901 aa13.14□□□□□ -0.31
KCNMA1-225ENST00000626620 ZNF609O15014 1411 aa13.14□□□□□ -0.31
KCNMA1-225ENST00000626620 CDC5LQ99459 802 aaKnown RBP13.14□□□□□ -0.31
KCNMA1-225ENST00000626620 ANKRD18AQ8IVF6 992 aa13.14□□□□□ -0.31
KCNMA1-225ENST00000626620 EXOC6BQ9Y2D4 811 aa13.14□□□□□ -0.31
KCNMA1-225ENST00000626620 PPEF1O14829 653 aaPredicted RBP13.14□□□□□ -0.31
KCNMA1-225ENST00000626620 CNKSR1Q969H4 720 aa13.14□□□□□ -0.31
KCNMA1-225ENST00000626620 RTFDC1Q9BY42 306 aaPredicted RBP13.14□□□□□ -0.31
KCNMA1-225ENST00000626620 TMC4Q7Z404 712 aa13.13□□□□□ -0.31
KCNMA1-225ENST00000626620 CHRNDQ07001 517 aa13.13□□□□□ -0.31
KCNMA1-225ENST00000626620 TTLL6Q8N841 843 aa13.13□□□□□ -0.31
KCNMA1-225ENST00000626620 PIM2Q9P1W9 311 aa13.13□□□□□ -0.31
KCNMA1-225ENST00000626620 NPHP1O15259 732 aa13.12□□□□□ -0.31
KCNMA1-225ENST00000626620 GPSM2P81274 684 aa13.12□□□□□ -0.31
KCNMA1-225ENST00000626620 CHMP3Q9Y3E7 222 aa13.12□□□□□ -0.31
KCNMA1-225ENST00000626620 MROH5Q6ZUA9 1318 aa13.12□□□□□ -0.31
KCNMA1-225ENST00000626620 ZBTB22O15209 634 aa13.12□□□□□ -0.31
KCNMA1-225ENST00000626620 IL15P40933 162 aaPredicted RBP13.12□□□□□ -0.31
KCNMA1-225ENST00000626620 LDHAL6AQ6ZMR3 332 aa13.12□□□□□ -0.31
KCNMA1-225ENST00000626620 HMMRO75330 724 aa13.12□□□□□ -0.31
KCNMA1-225ENST00000626620 GCC1Q96CN9 775 aa13.12□□□□□ -0.31
KCNMA1-225ENST00000626620 SIL1Q9H173 461 aa13.12□□□□□ -0.31
KCNMA1-225ENST00000626620 RWDD1Q9H446 243 aaPredicted RBP13.12□□□□□ -0.31
KCNMA1-225ENST00000626620 ZC3H4Q9UPT8 1303 aaKnown RBP13.12□□□□□ -0.31
KCNMA1-225ENST00000626620 SURF6O75683 361 aaKnown RBP13.11□□□□□ -0.31
KCNMA1-225ENST00000626620 NUCB1Q02818 461 aa13.11□□□□□ -0.31
KCNMA1-225ENST00000626620 TFCP2Q12800 502 aa13.11□□□□□ -0.31
KCNMA1-225ENST00000626620 ZNF622Q969S3 477 aaKnown RBP eCLIP13.11□□□□□ -0.31
KCNMA1-225ENST00000626620 ANP32EQ9BTT0 268 aa13.11□□□□□ -0.31
KCNMA1-225ENST00000626620 GPR108Q9NPR9 543 aa13.11□□□□□ -0.31
KCNMA1-225ENST00000626620 RAB11FIP3O75154 756 aa13.11□□□□□ -0.31
KCNMA1-225ENST00000626620 PDE8BO95263 885 aa13.11□□□□□ -0.31
KCNMA1-225ENST00000626620 IGHMBP2P38935 993 aaKnown RBP13.11□□□□□ -0.31
KCNMA1-225ENST00000626620 C15orf52Q6ZUT6 534 aaKnown RBP13.11□□□□□ -0.31
KCNMA1-225ENST00000626620 RHPN1Q8TCX5 695 aa13.11□□□□□ -0.31
KCNMA1-225ENST00000626620 POLLQ9UGP5 575 aa13.11□□□□□ -0.31
KCNMA1-225ENST00000626620 SCN9AQ15858 1988 aa13.11□□□□□ -0.31
KCNMA1-225ENST00000626620 SNAP23O00161 211 aa13.1□□□□□ -0.31
KCNMA1-225ENST00000626620 MYH13Q9UKX3 1938 aa13.1□□□□□ -0.31
KCNMA1-225ENST00000626620 EAF2Q96CJ1 260 aaPredicted RBP13.1□□□□□ -0.31
KCNMA1-225ENST00000626620 KLRK1P26718 216 aa13.09□□□□□ -0.31
KCNMA1-225ENST00000626620 DALRD3Q5D0E6 543 aaKnown RBP13.09□□□□□ -0.31
KCNMA1-225ENST00000626620 DOCK2Q92608 1830 aa13.09□□□□□ -0.31
KCNMA1-225ENST00000626620 NFKBIEO00221 500 aa13.09□□□□□ -0.31
KCNMA1-225ENST00000626620 TAF5LO75529 589 aa13.09□□□□□ -0.31
KCNMA1-225ENST00000626620 DNAJC5GQ8N7S2 189 aa13.09□□□□□ -0.31
KCNMA1-225ENST00000626620 PDE4AP27815 886 aa13.09□□□□□ -0.31
KCNMA1-225ENST00000626620 TBC1D16Q8TBP0 767 aa13.09□□□□□ -0.31
KCNMA1-225ENST00000626620 MPHOSPH8Q99549 860 aa13.09□□□□□ -0.31
KCNMA1-225ENST00000626620 LTBP3Q9NS15 1303 aa13.08□□□□□ -0.31
KCNMA1-225ENST00000626620 C21orf2O43822 256 aa13.08□□□□□ -0.32
KCNMA1-225ENST00000626620 SMARCA5O60264 1052 aaPredicted RBP13.08□□□□□ -0.32
KCNMA1-225ENST00000626620 CENPQQ7L2Z9 268 aaPredicted RBP13.08□□□□□ -0.32
KCNMA1-225ENST00000626620 TXNRD3Q86VQ6 643 aa13.08□□□□□ -0.32
KCNMA1-225ENST00000626620 HELBQ8NG08 1087 aaPredicted RBP13.08□□□□□ -0.32
KCNMA1-225ENST00000626620 GPBP1L1Q9HC44 474 aaPredicted RBP13.08□□□□□ -0.32
KCNMA1-225ENST00000626620 SCN4AP35499 1836 aa13.08□□□□□ -0.32
KCNMA1-225ENST00000626620 XDHP47989 1333 aa13.08□□□□□ -0.32
KCNMA1-225ENST00000626620 TNNI3KQ59H18 835 aa13.08□□□□□ -0.32
KCNMA1-225ENST00000626620 KIF1BPQ96EK5 621 aa13.08□□□□□ -0.32
KCNMA1-225ENST00000626620 FPGT-TNNI3KV9GXZ4 949 aa13.08□□□□□ -0.32
KCNMA1-225ENST00000626620 MYO5AQ9Y4I1 1855 aaKnown RBP13.08□□□□□ -0.32
KCNMA1-225ENST00000626620 HSPA6P17066 643 aa13.08□□□□□ -0.32
KCNMA1-225ENST00000626620 PSMD1Q99460 953 aa13.08□□□□□ -0.32
KCNMA1-225ENST00000626620 CNNM1Q9NRU3 951 aa13.08□□□□□ -0.32
KCNMA1-225ENST00000626620 TLR7Q9NYK1 1049 aaKnown RBP13.08□□□□□ -0.32
KCNMA1-225ENST00000626620 BCS1LQ9Y276 419 aa13.08□□□□□ -0.32
KCNMA1-225ENST00000626620 COL1A1P02452 1464 aaPredicted RBP13.08□□□□□ -0.32
KCNMA1-225ENST00000626620 G3BP1Q13283 466 aaKnown RBP eCLIP13.07□□□□□ -0.32
KCNMA1-225ENST00000626620 C16orf71Q8IYS4 520 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms