RNA–Protein interactions for RNA: ENST00000622143.1

SRSF4-207, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-207ENST00000622143 LINC00528Q8N1L1 170 aa7.2□□□□□ -1.26
SRSF4-207ENST00000622143 ABTB2Q8N961 1025 aa7.2□□□□□ -1.26
SRSF4-207ENST00000622143 ALG2Q9H553 416 aa7.2□□□□□ -1.26
SRSF4-207ENST00000622143 THRAP3Q9Y2W1 955 aaKnown RBP7.2□□□□□ -1.26
SRSF4-207ENST00000622143 WNK3Q9BYP7 1800 aa7.2□□□□□ -1.26
SRSF4-207ENST00000622143 ITSN1Q15811 1721 aa7.19□□□□□ -1.26
SRSF4-207ENST00000622143 KCNQ4P56696 695 aa7.19□□□□□ -1.26
SRSF4-207ENST00000622143 SCARF1Q14162 830 aa7.19□□□□□ -1.26
SRSF4-207ENST00000622143 COL13A1Q5TAT6 717 aaPredicted RBP7.19□□□□□ -1.26
SRSF4-207ENST00000622143 CCDC82Q8N4S0 544 aa7.19□□□□□ -1.26
SRSF4-207ENST00000622143 NUDT16Q96DE0 195 aaKnown RBP7.19□□□□□ -1.26
SRSF4-207ENST00000622143 PAPPAQ13219 1627 aa7.19□□□□□ -1.26
SRSF4-207ENST00000622143 MAP3K5Q99683 1374 aa7.19□□□□□ -1.26
SRSF4-207ENST00000622143 CSB-PGBD3P0DP91 1061 aa7.18□□□□□ -1.26
SRSF4-207ENST00000622143 POLD1P28340 1107 aa7.18□□□□□ -1.26
SRSF4-207ENST00000622143 HTRA3P83110 453 aa7.18□□□□□ -1.26
SRSF4-207ENST00000622143 CBLBQ13191 982 aa7.18□□□□□ -1.26
SRSF4-207ENST00000622143 MSL1Q68DK7 614 aa7.18□□□□□ -1.26
SRSF4-207ENST00000622143 ZNF592Q92610 1267 aa7.18□□□□□ -1.26
SRSF4-207ENST00000622143 ARID3AQ99856 593 aa7.18□□□□□ -1.26
SRSF4-207ENST00000622143 ACEP12821 1306 aa7.18□□□□□ -1.26
SRSF4-207ENST00000622143 EIF3AQ14152 1382 aaKnown RBP7.18□□□□□ -1.26
SRSF4-207ENST00000622143 ADGRB1O14514 1584 aa7.17□□□□□ -1.26
SRSF4-207ENST00000622143 SOBPA7XYQ1 873 aa7.17□□□□□ -1.26
SRSF4-207ENST00000622143 LILRA1O75019 489 aa7.17□□□□□ -1.26
SRSF4-207ENST00000622143 GCP02774 474 aa7.17□□□□□ -1.26
SRSF4-207ENST00000622143 DHX9Q08211 1270 aaKnown RBP7.17□□□□□ -1.26
SRSF4-207ENST00000622143 C6orf118Q5T5N4 469 aa7.17□□□□□ -1.26
SRSF4-207ENST00000622143 CCDC97Q96F63 343 aaPredicted RBP7.17□□□□□ -1.26
SRSF4-207ENST00000622143 UCN2Q96RP3 112 aa7.17□□□□□ -1.26
SRSF4-207ENST00000622143 LRRC4BQ9NT99 713 aa7.17□□□□□ -1.26
SRSF4-207ENST00000622143 PGPEP1Q9NXJ5 209 aa7.17□□□□□ -1.26
SRSF4-207ENST00000622143 CPDO75976 1380 aa7.17□□□□□ -1.26
SRSF4-207ENST00000622143 PIK3CDO00329 1044 aa7.16□□□□□ -1.26
SRSF4-207ENST00000622143 UPP2O95045 317 aa7.16□□□□□ -1.26
SRSF4-207ENST00000622143 KCTD17Q8N5Z5 321 aa7.16□□□□□ -1.26
SRSF4-207ENST00000622143 TSEN34Q9BSV6 310 aaKnown RBP7.16□□□□□ -1.26
SRSF4-207ENST00000622143 CDK19Q9BWU1 502 aa7.16□□□□□ -1.26
SRSF4-207ENST00000622143 TMPRSS4Q9NRS4 437 aa7.16□□□□□ -1.26
SRSF4-207ENST00000622143 NXF1Q9UBU9 619 aaKnown RBP7.16□□□□□ -1.26
SRSF4-207ENST00000622143 GOLGB1Q14789 3259 aaKnown RBP7.16□□□□□ -1.26
SRSF4-207ENST00000622143 USP19O94966 1318 aa7.16□□□□□ -1.26
SRSF4-207ENST00000622143 NHSQ6T4R5 1651 aa7.16□□□□□ -1.26
SRSF4-207ENST00000622143 TUBGCP6Q96RT7 1819 aa7.15□□□□□ -1.26
SRSF4-207ENST00000622143 ERVH48-1M5A8F1 160 aa7.15□□□□□ -1.26
SRSF4-207ENST00000622143 BMP2P12643 396 aa7.15□□□□□ -1.26
SRSF4-207ENST00000622143 MCCD1P59942 119 aaPredicted RBP7.15□□□□□ -1.26
SRSF4-207ENST00000622143 TNS4Q8IZW8 715 aa7.15□□□□□ -1.26
SRSF4-207ENST00000622143 KDF1Q8NAX2 398 aaPredicted RBP7.15□□□□□ -1.26
SRSF4-207ENST00000622143 CEP126Q9P2H0 1117 aa7.15□□□□□ -1.26
SRSF4-207ENST00000622143 PNPLA7Q6ZV29 1317 aa7.15□□□□□ -1.26
SRSF4-207ENST00000622143 RGPD5Q99666 1765 aa7.15□□□□□ -1.27
SRSF4-207ENST00000622143 BTAF1O14981 1849 aa7.15□□□□□ -1.27
SRSF4-207ENST00000622143 H3BM21 787 aa7.14□□□□□ -1.27
SRSF4-207ENST00000622143 EXOC5O00471 708 aa7.14□□□□□ -1.27
SRSF4-207ENST00000622143 SPINT1O43278 529 aa7.14□□□□□ -1.27
SRSF4-207ENST00000622143 GRIN3BO60391 1043 aa7.14□□□□□ -1.27
SRSF4-207ENST00000622143 SLFNL1Q499Z3 407 aa7.14□□□□□ -1.27
SRSF4-207ENST00000622143 NLRP13Q86W25 1043 aa7.14□□□□□ -1.27
SRSF4-207ENST00000622143 RNF135Q8IUD6 432 aa7.14□□□□□ -1.27
SRSF4-207ENST00000622143 NPAS3Q8IXF0 933 aa7.14□□□□□ -1.27
SRSF4-207ENST00000622143 WDR17Q8IZU2 1322 aa7.14□□□□□ -1.27
SRSF4-207ENST00000622143 ARHGEF28Q8N1W1 1705 aaKnown RBP7.14□□□□□ -1.27
SRSF4-207ENST00000622143 MPHOSPH9Q99550 1183 aa7.14□□□□□ -1.27
SRSF4-207ENST00000622143 TFCP2L1Q9NZI6 479 aa7.14□□□□□ -1.27
SRSF4-207ENST00000622143 DNMT3LQ9UJW3 386 aa7.14□□□□□ -1.27
SRSF4-207ENST00000622143 USP6P35125 1406 aa7.13□□□□□ -1.27
SRSF4-207ENST00000622143 POLR3AO14802 1390 aaPredicted RBP7.13□□□□□ -1.27
SRSF4-207ENST00000622143 ADCY9O60503 1353 aa7.13□□□□□ -1.27
SRSF4-207ENST00000622143 BRD4O60885 1362 aaPredicted RBP7.13□□□□□ -1.27
SRSF4-207ENST00000622143 ADD1P35611 737 aaKnown RBP7.13□□□□□ -1.27
SRSF4-207ENST00000622143 RNF20Q5VTR2 975 aa7.13□□□□□ -1.27
SRSF4-207ENST00000622143 AGBL1Q96MI9 1066 aa7.13□□□□□ -1.27
SRSF4-207ENST00000622143 SERPINA10Q9UK55 444 aa7.13□□□□□ -1.27
SRSF4-207ENST00000622143 COL18A1P39060 1754 aa7.13□□□□□ -1.27
SRSF4-207ENST00000622143 TNS2Q63HR2 1409 aa7.12□□□□□ -1.27
SRSF4-207ENST00000622143 PPIP5K1Q6PFW1 1433 aa7.12□□□□□ -1.27
SRSF4-207ENST00000622143 AATKQ6ZMQ8 1374 aa7.12□□□□□ -1.27
SRSF4-207ENST00000622143 SKIP12755 728 aa7.12□□□□□ -1.27
SRSF4-207ENST00000622143 VEGFBP49765 207 aa7.12□□□□□ -1.27
SRSF4-207ENST00000622143 TBC1D9Q6ZT07 1266 aa7.12□□□□□ -1.27
SRSF4-207ENST00000622143 DNAJC5GQ8N7S2 189 aa7.12□□□□□ -1.27
SRSF4-207ENST00000622143 BCL9O00512 1426 aa7.11□□□□□ -1.27
SRSF4-207ENST00000622143 CPSF1Q10570 1443 aaKnown RBP7.11□□□□□ -1.27
SRSF4-207ENST00000622143 ERBB4Q15303 1308 aa7.11□□□□□ -1.27
SRSF4-207ENST00000622143 PALM3A6NDB9 673 aaPredicted RBP7.11□□□□□ -1.27
SRSF4-207ENST00000622143 MAN1A2O60476 641 aa7.11□□□□□ -1.27
SRSF4-207ENST00000622143 PRELPP51888 382 aa7.11□□□□□ -1.27
SRSF4-207ENST00000622143 SRPK2P78362 688 aaKnown RBP7.11□□□□□ -1.27
SRSF4-207ENST00000622143 SYTL4Q96C24 671 aaPredicted RBP7.11□□□□□ -1.27
SRSF4-207ENST00000622143 PPP1R12CQ9BZL4 782 aa7.11□□□□□ -1.27
SRSF4-207ENST00000622143 CYLDQ9NQC7 956 aa7.11□□□□□ -1.27
SRSF4-207ENST00000622143 SLIT3O75094 1523 aa7.11□□□□□ -1.27
SRSF4-207ENST00000622143 COL24A1Q17RW2 1714 aa7.1□□□□□ -1.27
SRSF4-207ENST00000622143 WDR90Q96KV7 1748 aa7.1□□□□□ -1.27
SRSF4-207ENST00000622143 PIK3C2AO00443 1686 aa7.1□□□□□ -1.27
SRSF4-207ENST00000622143 FAM181BA6NEQ2 426 aa7.1□□□□□ -1.27
SRSF4-207ENST00000622143 TTLL8A6PVC2 850 aa7.1□□□□□ -1.27
SRSF4-207ENST00000622143 USP17L5A8MUK1 530 aa7.1□□□□□ -1.27
SRSF4-207ENST00000622143 ATP9BO43861 1147 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms