RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 LCE3BQ5TA77 95 aa6.94□□□□□ -1.3
SMAD4-207ENST00000589076 MCTP1Q6DN14 999 aa6.94□□□□□ -1.3
SMAD4-207ENST00000589076 CEP41Q9BYV8 373 aa6.94□□□□□ -1.3
SMAD4-207ENST00000589076 PPME1Q9Y570 386 aa6.94□□□□□ -1.3
SMAD4-207ENST00000589076 OPLAHO14841 1288 aa6.93□□□□□ -1.3
SMAD4-207ENST00000589076 ALX3O95076 343 aa6.93□□□□□ -1.3
SMAD4-207ENST00000589076 TXKP42681 527 aa6.93□□□□□ -1.3
SMAD4-207ENST00000589076 FNBP4Q8N3X1 1017 aaPredicted RBP6.93□□□□□ -1.3
SMAD4-207ENST00000589076 GOLGA2P5Q9HBQ8 144 aa6.93□□□□□ -1.3
SMAD4-207ENST00000589076 STOML1Q9UBI4 398 aa6.93□□□□□ -1.3
SMAD4-207ENST00000589076 RAXQ9Y2V3 346 aa6.93□□□□□ -1.3
SMAD4-207ENST00000589076 DHX15O43143 795 aaKnown RBP6.92□□□□□ -1.3
SMAD4-207ENST00000589076 MMP20O60882 483 aa6.92□□□□□ -1.3
SMAD4-207ENST00000589076 BRD2P25440 801 aaKnown RBP6.92□□□□□ -1.3
SMAD4-207ENST00000589076 IRAK1P51617 712 aa6.92□□□□□ -1.3
SMAD4-207ENST00000589076 FAM117BQ6P1L5 589 aa6.92□□□□□ -1.3
SMAD4-207ENST00000589076 NLRP13Q86W25 1043 aa6.92□□□□□ -1.3
SMAD4-207ENST00000589076 FNDC3AQ9Y2H6 1198 aaKnown RBP6.92□□□□□ -1.3
SMAD4-207ENST00000589076 USP20Q9Y2K6 914 aa6.92□□□□□ -1.3
SMAD4-207ENST00000589076 COBLO75128 1261 aa6.91□□□□□ -1.3
SMAD4-207ENST00000589076 SMNDC1O75940 238 aaKnown RBP eCLIP6.91□□□□□ -1.3
SMAD4-207ENST00000589076 HOXD8P13378 290 aaPredicted RBP6.91□□□□□ -1.3
SMAD4-207ENST00000589076 GRIK1P39086 918 aa6.91□□□□□ -1.3
SMAD4-207ENST00000589076 PIK3R5Q8WYR1 880 aa6.91□□□□□ -1.3
SMAD4-207ENST00000589076 IGLV1-40P01703 118 aa6.9□□□□□ -1.3
SMAD4-207ENST00000589076 SETDB1Q15047 1291 aa6.9□□□□□ -1.3
SMAD4-207ENST00000589076 ARXQ96QS3 562 aa6.9□□□□□ -1.3
SMAD4-207ENST00000589076 COL17A1Q9UMD9 1497 aaPredicted RBP6.9□□□□□ -1.31
SMAD4-207ENST00000589076 UBAP1LF5GYI3 381 aa6.89□□□□□ -1.31
SMAD4-207ENST00000589076 CD97P48960 835 aa6.89□□□□□ -1.31
SMAD4-207ENST00000589076 HYAL2Q12891 473 aa6.89□□□□□ -1.31
SMAD4-207ENST00000589076 UVSSAQ2YD98 709 aa6.89□□□□□ -1.31
SMAD4-207ENST00000589076 TTC39BQ5VTQ0 682 aaPredicted RBP6.89□□□□□ -1.31
SMAD4-207ENST00000589076 Q6ZS46 218 aa6.89□□□□□ -1.31
SMAD4-207ENST00000589076 KRTAP4-12Q9BQ66 201 aa6.89□□□□□ -1.31
SMAD4-207ENST00000589076 LRFN2Q9ULH4 789 aa6.89□□□□□ -1.31
SMAD4-207ENST00000589076 TRIM33Q9UPN9 1127 aa6.89□□□□□ -1.31
SMAD4-207ENST00000589076 A6NJR5 290 aa6.88□□□□□ -1.31
SMAD4-207ENST00000589076 CD68P34810 354 aaPredicted RBP6.88□□□□□ -1.31
SMAD4-207ENST00000589076 SCNN1AP37088 669 aa6.88□□□□□ -1.31
SMAD4-207ENST00000589076 SWI5Q1ZZU3 235 aa6.88□□□□□ -1.31
SMAD4-207ENST00000589076 COX20Q5RI15 118 aa6.88□□□□□ -1.31
SMAD4-207ENST00000589076 INTS5Q6P9B9 1019 aaKnown RBP6.88□□□□□ -1.31
SMAD4-207ENST00000589076 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.88□□□□□ -1.31
SMAD4-207ENST00000589076 AGGF1Q8N302 714 aaeCLIP6.88□□□□□ -1.31
SMAD4-207ENST00000589076 UTP4Q969X6 686 aaKnown RBP6.88□□□□□ -1.31
SMAD4-207ENST00000589076 ZMYND15Q9H091 742 aa6.88□□□□□ -1.31
SMAD4-207ENST00000589076 KCNMB2Q9Y691 235 aa6.88□□□□□ -1.31
SMAD4-207ENST00000589076 CDC27P30260 824 aa6.87□□□□□ -1.31
SMAD4-207ENST00000589076 CEP135Q66GS9 1140 aa6.87□□□□□ -1.31
SMAD4-207ENST00000589076 C16orf46Q6P387 395 aa6.87□□□□□ -1.31
SMAD4-207ENST00000589076 ACAD11Q709F0 780 aa6.87□□□□□ -1.31
SMAD4-207ENST00000589076 NOVA2Q9UNW9 492 aaKnown RBP6.87□□□□□ -1.31
SMAD4-207ENST00000589076 LINC01387J3KSC0 135 aa6.86□□□□□ -1.31
SMAD4-207ENST00000589076 SART1O43290 800 aaKnown RBP6.86□□□□□ -1.31
SMAD4-207ENST00000589076 FKBP5Q13451 457 aaPredicted RBP6.86□□□□□ -1.31
SMAD4-207ENST00000589076 KLHL23Q8NBE8 558 aa6.86□□□□□ -1.31
SMAD4-207ENST00000589076 OR13H1Q8NG92 308 aa6.86□□□□□ -1.31
SMAD4-207ENST00000589076 DUOXA2Q1HG44 320 aa6.85□□□□□ -1.31
SMAD4-207ENST00000589076 COL26A1Q96A83 441 aa6.85□□□□□ -1.31
SMAD4-207ENST00000589076 PRIMPOLQ96LW4 560 aa6.85□□□□□ -1.31
SMAD4-207ENST00000589076 LACRTQ9GZZ8 138 aa6.85□□□□□ -1.31
SMAD4-207ENST00000589076 ACIN1Q9UKV3 1341 aaKnown RBP6.84□□□□□ -1.31
SMAD4-207ENST00000589076 YBX3P16989 372 aaKnown RBP eCLIP6.84□□□□□ -1.31
SMAD4-207ENST00000589076 GP2P55259 537 aaKnown RBP6.84□□□□□ -1.31
SMAD4-207ENST00000589076 CABP4P57796 275 aa6.84□□□□□ -1.31
SMAD4-207ENST00000589076 NFIAQ12857 509 aa6.84□□□□□ -1.31
SMAD4-207ENST00000589076 NCAPG2Q86XI2 1143 aa6.84□□□□□ -1.31
SMAD4-207ENST00000589076 ETFBKMTQ8IXQ9 262 aa6.84□□□□□ -1.31
SMAD4-207ENST00000589076 UBL7Q96S82 380 aaPredicted RBP6.84□□□□□ -1.31
SMAD4-207ENST00000589076 KIAA1324LA8MWY0 1029 aaPredicted RBP6.83□□□□□ -1.32
SMAD4-207ENST00000589076 PRMT3O60678 531 aa6.83□□□□□ -1.32
SMAD4-207ENST00000589076 TGFB1P01137 390 aa6.83□□□□□ -1.32
SMAD4-207ENST00000589076 PTPRAP18433 802 aa6.83□□□□□ -1.32
SMAD4-207ENST00000589076 TXNDC11Q6PKC3 985 aa6.83□□□□□ -1.32
SMAD4-207ENST00000589076 DBNDD2Q9BQY9 259 aa6.83□□□□□ -1.32
SMAD4-207ENST00000589076 FSCN2O14926 492 aa6.82□□□□□ -1.32
SMAD4-207ENST00000589076 CDC25BP30305 580 aa6.82□□□□□ -1.32
SMAD4-207ENST00000589076 TRIP4Q15650 581 aaPredicted RBP6.82□□□□□ -1.32
SMAD4-207ENST00000589076 CDCA8Q53HL2 280 aa6.82□□□□□ -1.32
SMAD4-207ENST00000589076 RNF43Q68DV7 783 aa6.82□□□□□ -1.32
SMAD4-207ENST00000589076 ABTB2Q8N961 1025 aa6.82□□□□□ -1.32
SMAD4-207ENST00000589076 GALNT11Q8NCW6 608 aa6.82□□□□□ -1.32
SMAD4-207ENST00000589076 GIMAP7Q8NHV1 300 aa6.82□□□□□ -1.32
SMAD4-207ENST00000589076 SEC31BQ9NQW1 1179 aa6.82□□□□□ -1.32
SMAD4-207ENST00000589076 ZAP70P43403 619 aa6.81□□□□□ -1.32
SMAD4-207ENST00000589076 ATP11AP98196 1134 aa6.81□□□□□ -1.32
SMAD4-207ENST00000589076 CFAP70Q5T0N1 1121 aa6.81□□□□□ -1.32
SMAD4-207ENST00000589076 TTC16Q8NEE8 873 aa6.81□□□□□ -1.32
SMAD4-207ENST00000589076 MYRFLQ96LU7 910 aa6.81□□□□□ -1.32
SMAD4-207ENST00000589076 KCNF1Q9H3M0 494 aa6.81□□□□□ -1.32
SMAD4-207ENST00000589076 C7orf69Q9H7B7 122 aa6.81□□□□□ -1.32
SMAD4-207ENST00000589076 ABI2Q9NYB9 513 aaPredicted RBP6.81□□□□□ -1.32
SMAD4-207ENST00000589076 WNT11O96014 354 aa6.8□□□□□ -1.32
SMAD4-207ENST00000589076 RPLP1P05386 114 aaKnown RBP6.8□□□□□ -1.32
SMAD4-207ENST00000589076 TAL1P17542 331 aaPredicted RBP6.8□□□□□ -1.32
SMAD4-207ENST00000589076 ANKRD34AQ69YU3 496 aa6.8□□□□□ -1.32
SMAD4-207ENST00000589076 ZDHHC13Q8IUH4 622 aa6.8□□□□□ -1.32
SMAD4-207ENST00000589076 CLEC10AQ8IUN9 316 aa6.8□□□□□ -1.32
SMAD4-207ENST00000589076 TRIM42Q8IWZ5 723 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms