RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 ELP3Q9H9T3 547 aa8.12□□□□□ -1.11
SMAD4-203ENST00000585448 SLC6A14Q9UN76 642 aa8.12□□□□□ -1.11
SMAD4-203ENST00000585448 CENPJQ9HC77 1338 aaPredicted RBP8.11□□□□□ -1.11
SMAD4-203ENST00000585448 ZBTB42B2RXF5 422 aa8.11□□□□□ -1.11
SMAD4-203ENST00000585448 KIF4AO95239 1232 aa8.11□□□□□ -1.11
SMAD4-203ENST00000585448 NCLP19338 710 aaKnown RBP8.11□□□□□ -1.11
SMAD4-203ENST00000585448 CALD1Q05682 793 aaKnown RBP8.11□□□□□ -1.11
SMAD4-203ENST00000585448 C20orf204Q6ZNR8 217 aa8.11□□□□□ -1.11
SMAD4-203ENST00000585448 KRT25Q7Z3Z0 450 aa8.11□□□□□ -1.11
SMAD4-203ENST00000585448 ZNF438Q7Z4V0 828 aa8.11□□□□□ -1.11
SMAD4-203ENST00000585448 TTC16Q8NEE8 873 aa8.11□□□□□ -1.11
SMAD4-203ENST00000585448 NEDD1Q8NHV4 660 aa8.11□□□□□ -1.11
SMAD4-203ENST00000585448 ALKBH8Q96BT7 664 aaKnown RBP8.11□□□□□ -1.11
SMAD4-203ENST00000585448 DCTN4Q9UJW0 460 aa8.11□□□□□ -1.11
SMAD4-203ENST00000585448 PIK3R2O00459 728 aa8.1□□□□□ -1.11
SMAD4-203ENST00000585448 AEBP1Q8IUX7 1158 aa8.1□□□□□ -1.11
SMAD4-203ENST00000585448 PMEPA1Q969W9 287 aa8.1□□□□□ -1.11
SMAD4-203ENST00000585448 DMRTB1Q96MA1 342 aa8.1□□□□□ -1.11
SMAD4-203ENST00000585448 TMEM63CQ9P1W3 806 aa8.1□□□□□ -1.11
SMAD4-203ENST00000585448 STARD13Q9Y3M8 1113 aa8.1□□□□□ -1.11
SMAD4-203ENST00000585448 TTC39BQ5VTQ0 682 aaPredicted RBP8.09□□□□□ -1.11
SMAD4-203ENST00000585448 SND1Q7KZF4 910 aaKnown RBP eCLIP8.09□□□□□ -1.11
SMAD4-203ENST00000585448 SNX29Q8TEQ0 813 aa8.09□□□□□ -1.11
SMAD4-203ENST00000585448 SCARF2Q96GP6 870 aaPredicted RBP8.09□□□□□ -1.11
SMAD4-203ENST00000585448 NAP1L5Q96NT1 182 aaPredicted RBP8.09□□□□□ -1.11
SMAD4-203ENST00000585448 NAGPAQ9UK23 515 aa8.09□□□□□ -1.11
SMAD4-203ENST00000585448 PPM1GO15355 546 aaPredicted RBP8.08□□□□□ -1.12
SMAD4-203ENST00000585448 TNFRSF21O75509 655 aa8.08□□□□□ -1.12
SMAD4-203ENST00000585448 HSP90AA1P07900 732 aaKnown RBP8.08□□□□□ -1.12
SMAD4-203ENST00000585448 C8orf34Q49A92 452 aa8.08□□□□□ -1.12
SMAD4-203ENST00000585448 MICALL1Q8N3F8 863 aa8.08□□□□□ -1.12
SMAD4-203ENST00000585448 IPO4Q8TEX9 1081 aaKnown RBP8.08□□□□□ -1.12
SMAD4-203ENST00000585448 MKL2Q9ULH7 1088 aa8.08□□□□□ -1.12
SMAD4-203ENST00000585448 LOC102724428A0A0B4J2F2 783 aa8.07□□□□□ -1.12
SMAD4-203ENST00000585448 RNF225M0QZC1 329 aaPredicted RBP8.07□□□□□ -1.12
SMAD4-203ENST00000585448 AMPD1P23109 780 aa8.07□□□□□ -1.12
SMAD4-203ENST00000585448 ANP32AP39687 249 aaKnown RBP8.07□□□□□ -1.12
SMAD4-203ENST00000585448 SIK1P57059 783 aa8.07□□□□□ -1.12
SMAD4-203ENST00000585448 LINC00114Q6XXX2 140 aa8.07□□□□□ -1.12
SMAD4-203ENST00000585448 BEND7Q8N7W2 519 aaPredicted RBP8.07□□□□□ -1.12
SMAD4-203ENST00000585448 IPO9Q96P70 1041 aaKnown RBP8.07□□□□□ -1.12
SMAD4-203ENST00000585448 CHRDQ9H2X0 955 aa8.07□□□□□ -1.12
SMAD4-203ENST00000585448 PHF20L1A8MW92 1017 aa8.06□□□□□ -1.12
SMAD4-203ENST00000585448 ALBP02768 609 aa8.06□□□□□ -1.12
SMAD4-203ENST00000585448 NEFMP07197 916 aa8.06□□□□□ -1.12
SMAD4-203ENST00000585448 MARSP56192 900 aaKnown RBP8.06□□□□□ -1.12
SMAD4-203ENST00000585448 HYAL2Q12891 473 aa8.06□□□□□ -1.12
SMAD4-203ENST00000585448 COL9A3Q14050 684 aaPredicted RBP8.06□□□□□ -1.12
SMAD4-203ENST00000585448 ILDR2Q71H61 639 aa8.06□□□□□ -1.12
SMAD4-203ENST00000585448 PODNQ7Z5L7 613 aa8.06□□□□□ -1.12
SMAD4-203ENST00000585448 ALYREFQ86V81 257 aaKnown RBP8.06□□□□□ -1.12
SMAD4-203ENST00000585448 CACTIN-AS1Q8N1I8 211 aa8.06□□□□□ -1.12
SMAD4-203ENST00000585448 LPIN3Q9BQK8 851 aa8.06□□□□□ -1.12
SMAD4-203ENST00000585448 BIN2Q9UBW5 565 aaPredicted RBP8.06□□□□□ -1.12
SMAD4-203ENST00000585448 SALL4Q9UJQ4 1053 aa8.06□□□□□ -1.12
SMAD4-203ENST00000585448 NAP1L2Q9ULW6 460 aaPredicted RBP8.06□□□□□ -1.12
SMAD4-203ENST00000585448 A6NHS1 94 aa8.05□□□□□ -1.12
SMAD4-203ENST00000585448 M0R082 166 aa8.05□□□□□ -1.12
SMAD4-203ENST00000585448 GNB5O14775 395 aa8.05□□□□□ -1.12
SMAD4-203ENST00000585448 SNRPNP63162 240 aaKnown RBP8.05□□□□□ -1.12
SMAD4-203ENST00000585448 FAM35AQ86V20 835 aa8.05□□□□□ -1.12
SMAD4-203ENST00000585448 ZNF417Q8TAU3 575 aa8.05□□□□□ -1.12
SMAD4-203ENST00000585448 ZNF587Q96SQ5 575 aaPredicted RBP8.05□□□□□ -1.12
SMAD4-203ENST00000585448 CNTN3Q9P232 1028 aa8.05□□□□□ -1.12
SMAD4-203ENST00000585448 GPR182O15218 404 aa8.04□□□□□ -1.12
SMAD4-203ENST00000585448 LILRB5O75023 590 aa8.04□□□□□ -1.12
SMAD4-203ENST00000585448 PERM1Q5SV97 790 aa8.04□□□□□ -1.12
SMAD4-203ENST00000585448 PSAPL1Q6NUJ1 521 aa8.04□□□□□ -1.12
SMAD4-203ENST00000585448 C1orf127Q8N9H9 656 aa8.04□□□□□ -1.12
SMAD4-203ENST00000585448 ASB16Q96NS5 453 aa8.04□□□□□ -1.12
SMAD4-203ENST00000585448 RBSNQ9H1K0 784 aa8.04□□□□□ -1.12
SMAD4-203ENST00000585448 DNAJC25Q9H1X3 360 aa8.04□□□□□ -1.12
SMAD4-203ENST00000585448 IGFLR1Q9H665 355 aa8.04□□□□□ -1.12
SMAD4-203ENST00000585448 BCCIPQ9P287 314 aaKnown RBP eCLIP8.04□□□□□ -1.12
SMAD4-203ENST00000585448 PHACTR2O75167 634 aa8.03□□□□□ -1.12
SMAD4-203ENST00000585448 NID1P14543 1247 aa8.03□□□□□ -1.12
SMAD4-203ENST00000585448 CES1P23141 567 aa8.03□□□□□ -1.12
SMAD4-203ENST00000585448 KCNMA1Q12791 1236 aa8.03□□□□□ -1.12
SMAD4-203ENST00000585448 DSC3Q14574 896 aa8.03□□□□□ -1.12
SMAD4-203ENST00000585448 GRIK5Q16478 980 aa8.03□□□□□ -1.12
SMAD4-203ENST00000585448 TMC7Q7Z402 723 aa8.03□□□□□ -1.12
SMAD4-203ENST00000585448 NPM2Q86SE8 214 aaKnown RBP8.03□□□□□ -1.12
SMAD4-203ENST00000585448 CEP120Q8N960 986 aa8.03□□□□□ -1.12
SMAD4-203ENST00000585448 ZFYVE28Q9HCC9 887 aa8.03□□□□□ -1.12
SMAD4-203ENST00000585448 TREHO43280 583 aa8.02□□□□□ -1.13
SMAD4-203ENST00000585448 RGS9O75916 674 aaPredicted RBP8.02□□□□□ -1.13
SMAD4-203ENST00000585448 GHRHP01286 108 aa8.02□□□□□ -1.13
SMAD4-203ENST00000585448 CYP2E1P05181 493 aaPredicted RBP8.02□□□□□ -1.13
SMAD4-203ENST00000585448 CPB1P15086 417 aa8.02□□□□□ -1.13
SMAD4-203ENST00000585448 MAPK1P28482 360 aa8.02□□□□□ -1.13
SMAD4-203ENST00000585448 ITGAEP38570 1179 aa8.02□□□□□ -1.13
SMAD4-203ENST00000585448 TBC1D8BQ0IIM8 1120 aa8.02□□□□□ -1.13
SMAD4-203ENST00000585448 COL13A1Q5TAT6 717 aaPredicted RBP8.02□□□□□ -1.13
SMAD4-203ENST00000585448 ELMSAN1Q6PJG2 1045 aa8.02□□□□□ -1.13
SMAD4-203ENST00000585448 ZSCAN29Q8IWY8 852 aaPredicted RBP8.02□□□□□ -1.13
SMAD4-203ENST00000585448 SPACA7Q96KW9 195 aa8.02□□□□□ -1.13
SMAD4-203ENST00000585448 NSUN5Q96P11 429 aaKnown RBP8.02□□□□□ -1.13
SMAD4-203ENST00000585448 CHMP4AQ9BY43 222 aa8.02□□□□□ -1.13
SMAD4-203ENST00000585448 RRAGCQ9HB90 399 aa8.02□□□□□ -1.13
SMAD4-203ENST00000585448 NOP53Q9NZM5 478 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms