RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 GPSM2P81274 684 aa16■□□□□ 0.15
PRPF8-208ENST00000573716 TCIRG1Q13488 830 aa16■□□□□ 0.15
PRPF8-208ENST00000573716 DCAF8Q5TAQ9 597 aa16■□□□□ 0.15
PRPF8-208ENST00000573716 PLEKHF1Q96S99 279 aa16■□□□□ 0.15
PRPF8-208ENST00000573716 RTL5Q5HYW3 569 aaPredicted RBP15.99■□□□□ 0.15
PRPF8-208ENST00000573716 CELF1Q92879 486 aaKnown RBP15.99■□□□□ 0.15
PRPF8-208ENST00000573716 CDCA5Q96FF9 252 aa15.99■□□□□ 0.15
PRPF8-208ENST00000573716 EYA3Q99504 573 aa15.99■□□□□ 0.15
PRPF8-208ENST00000573716 POLLQ9UGP5 575 aa15.99■□□□□ 0.15
PRPF8-208ENST00000573716 HDAC9Q9UKV0 1011 aa15.99■□□□□ 0.15
PRPF8-208ENST00000573716 RTL9Q8NET4 1388 aa15.99■□□□□ 0.15
PRPF8-208ENST00000573716 FAM89AQ96GI7 184 aa15.98■□□□□ 0.15
PRPF8-208ENST00000573716 HPS5Q9UPZ3 1129 aa15.98■□□□□ 0.15
PRPF8-208ENST00000573716 RASAL3Q86YV0 1011 aa15.97■□□□□ 0.15
PRPF8-208ENST00000573716 PNNQ9H307 717 aaKnown RBP15.97■□□□□ 0.15
PRPF8-208ENST00000573716 SCN9AQ15858 1988 aa15.96■□□□□ 0.15
PRPF8-208ENST00000573716 COL4A1P02462 1669 aa15.96■□□□□ 0.15
PRPF8-208ENST00000573716 ANGEL2Q5VTE6 544 aaKnown RBP15.96■□□□□ 0.15
PRPF8-208ENST00000573716 ZC3H12CQ9C0D7 883 aaKnown RBP15.96■□□□□ 0.15
PRPF8-208ENST00000573716 ATP5J2-PTCD1G3V325 749 aa15.95■□□□□ 0.14
PRPF8-208ENST00000573716 TBC1D8O95759 1140 aa15.95■□□□□ 0.14
PRPF8-208ENST00000573716 RIPK4P57078 832 aa15.95■□□□□ 0.14
PRPF8-208ENST00000573716 SCARF1Q14162 830 aa15.95■□□□□ 0.14
PRPF8-208ENST00000573716 TBC1D16Q8TBP0 767 aa15.95■□□□□ 0.14
PRPF8-208ENST00000573716 UFL1O94874 794 aa15.94■□□□□ 0.14
PRPF8-208ENST00000573716 HOXD11P31277 338 aaPredicted RBP15.94■□□□□ 0.14
PRPF8-208ENST00000573716 MOB2Q70IA6 237 aa15.94■□□□□ 0.14
PRPF8-208ENST00000573716 REM2Q8IYK8 340 aaPredicted RBP15.94■□□□□ 0.14
PRPF8-208ENST00000573716 CHPF2Q9P2E5 772 aa15.94■□□□□ 0.14
PRPF8-208ENST00000573716 ANKIB1Q9P2G1 1089 aa15.94■□□□□ 0.14
PRPF8-208ENST00000573716 SCAF8Q9UPN6 1271 aaKnown RBP15.94■□□□□ 0.14
PRPF8-208ENST00000573716 LAS1LQ9Y4W2 734 aaKnown RBP15.94■□□□□ 0.14
PRPF8-208ENST00000573716 PAPPA2Q9BXP8 1791 aa15.93■□□□□ 0.14
PRPF8-208ENST00000573716 VIL1P09327 827 aaKnown RBP15.93■□□□□ 0.14
PRPF8-208ENST00000573716 TTLL12Q14166 644 aaPredicted RBP15.93■□□□□ 0.14
PRPF8-208ENST00000573716 SF3B3Q15393 1217 aaKnown RBP15.93■□□□□ 0.14
PRPF8-208ENST00000573716 KRT24Q2M2I5 525 aa15.93■□□□□ 0.14
PRPF8-208ENST00000573716 ZNF296Q8WUU4 475 aaPredicted RBP15.93■□□□□ 0.14
PRPF8-208ENST00000573716 UBE2Q2LH0YL09 131 aa15.92■□□□□ 0.14
PRPF8-208ENST00000573716 RPS8P62241 208 aaKnown RBP15.92■□□□□ 0.14
PRPF8-208ENST00000573716 MKRN3Q13064 507 aaKnown RBP15.92■□□□□ 0.14
PRPF8-208ENST00000573716 PKN2Q16513 984 aaKnown RBP15.92■□□□□ 0.14
PRPF8-208ENST00000573716 PLBD2Q8NHP8 589 aa15.92■□□□□ 0.14
PRPF8-208ENST00000573716 IRS4O14654 1257 aaPredicted RBP15.91■□□□□ 0.14
PRPF8-208ENST00000573716 NEUROD2Q15784 382 aa15.91■□□□□ 0.14
PRPF8-208ENST00000573716 PRAMEF18Q5VWM3 479 aa15.91■□□□□ 0.14
PRPF8-208ENST00000573716 RSBN1LQ6PCB5 846 aaPredicted RBP15.91■□□□□ 0.14
PRPF8-208ENST00000573716 ANKRD13DQ6ZTN6 518 aa15.91■□□□□ 0.14
PRPF8-208ENST00000573716 GGA1Q9UJY5 639 aa15.91■□□□□ 0.14
PRPF8-208ENST00000573716 FKBP1BP68106 108 aa15.9■□□□□ 0.14
PRPF8-208ENST00000573716 LMOD3Q0VAK6 560 aa15.9■□□□□ 0.14
PRPF8-208ENST00000573716 HDGFL1Q5TGJ6 251 aa15.9■□□□□ 0.14
PRPF8-208ENST00000573716 ISCA1Q9BUE6 129 aa15.9■□□□□ 0.14
PRPF8-208ENST00000573716 MYOZ2Q9NPC6 264 aa15.9■□□□□ 0.14
PRPF8-208ENST00000573716 SEC31BQ9NQW1 1179 aa15.9■□□□□ 0.14
PRPF8-208ENST00000573716 BABAM1Q9NWV8 329 aa15.9■□□□□ 0.14
PRPF8-208ENST00000573716 USP17L8P0C7I0 530 aa15.89■□□□□ 0.13
PRPF8-208ENST00000573716 ZNF280AP59817 542 aaPredicted RBP15.89■□□□□ 0.13
PRPF8-208ENST00000573716 AGBL3Q8NEM8 1001 aa15.89■□□□□ 0.13
PRPF8-208ENST00000573716 GPR25O00155 361 aa15.88■□□□□ 0.13
PRPF8-208ENST00000573716 TMPOP42166 694 aaKnown RBP15.88■□□□□ 0.13
PRPF8-208ENST00000573716 FBXW7Q969H0 707 aa15.88■□□□□ 0.13
PRPF8-208ENST00000573716 CCDC85AQ96PX6 553 aaPredicted RBP15.88■□□□□ 0.13
PRPF8-208ENST00000573716 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.88■□□□□ 0.13
PRPF8-208ENST00000573716 PSME4Q14997 1843 aa15.88■□□□□ 0.13
PRPF8-208ENST00000573716 FBXO46Q6PJ61 603 aaPredicted RBP15.87■□□□□ 0.13
PRPF8-208ENST00000573716 PODXL2Q9NZ53 605 aa15.87■□□□□ 0.13
PRPF8-208ENST00000573716 USP17L3A6NCW0 530 aa15.86■□□□□ 0.13
PRPF8-208ENST00000573716 USP17L4A6NCW7 530 aa15.86■□□□□ 0.13
PRPF8-208ENST00000573716 NF2P35240 595 aa15.86■□□□□ 0.13
PRPF8-208ENST00000573716 PRKG1Q13976 671 aa15.86■□□□□ 0.13
PRPF8-208ENST00000573716 USP17L1Q7RTZ2 530 aa15.86■□□□□ 0.13
PRPF8-208ENST00000573716 DBF4Q9UBU7 674 aaPredicted RBP15.86■□□□□ 0.13
PRPF8-208ENST00000573716 PITPNM2Q9BZ72 1349 aa15.86■□□□□ 0.13
PRPF8-208ENST00000573716 FKTNO75072 461 aa15.85■□□□□ 0.13
PRPF8-208ENST00000573716 NBPF9Q3BBW0 867 aa15.85■□□□□ 0.13
PRPF8-208ENST00000573716 RIC3Q7Z5B4 369 aa15.85■□□□□ 0.13
PRPF8-208ENST00000573716 CCDC146Q8IYE0 955 aa15.85■□□□□ 0.13
PRPF8-208ENST00000573716 JARID2Q92833 1246 aaPredicted RBP15.85■□□□□ 0.13
PRPF8-208ENST00000573716 GCC1Q96CN9 775 aa15.85■□□□□ 0.13
PRPF8-208ENST00000573716 SREBF2Q12772 1141 aa15.84■□□□□ 0.13
PRPF8-208ENST00000573716 CCDC152Q4G0S7 254 aa15.84■□□□□ 0.13
PRPF8-208ENST00000573716 GMLQ99445 158 aa15.84■□□□□ 0.13
PRPF8-208ENST00000573716 HYPKQ9NX55 129 aa15.84■□□□□ 0.13
PRPF8-208ENST00000573716 XDHP47989 1333 aa15.84■□□□□ 0.13
PRPF8-208ENST00000573716 SPEF2Q9C093 1822 aa15.83■□□□□ 0.12
PRPF8-208ENST00000573716 CHL1O00533 1208 aa15.83■□□□□ 0.12
PRPF8-208ENST00000573716 HSP90B1P14625 803 aaKnown RBP15.83■□□□□ 0.12
PRPF8-208ENST00000573716 TM4SF4P48230 202 aa15.83■□□□□ 0.12
PRPF8-208ENST00000573716 GOLGA2Q08379 1002 aa15.83■□□□□ 0.12
PRPF8-208ENST00000573716 ANKRD18AQ8IVF6 992 aa15.83■□□□□ 0.12
PRPF8-208ENST00000573716 ZBTB38Q8NAP3 1195 aaPredicted RBP15.83■□□□□ 0.12
PRPF8-208ENST00000573716 MXD3Q9BW11 206 aa15.83■□□□□ 0.12
PRPF8-208ENST00000573716 R3HDMLQ9H3Y0 253 aa15.83■□□□□ 0.12
PRPF8-208ENST00000573716 ZNF609O15014 1411 aa15.83■□□□□ 0.12
PRPF8-208ENST00000573716 SASH1O94885 1247 aa15.82■□□□□ 0.12
PRPF8-208ENST00000573716 TRIM28Q13263 835 aaKnown RBP15.82■□□□□ 0.12
PRPF8-208ENST00000573716 OGFOD1Q8N543 542 aa15.82■□□□□ 0.12
PRPF8-208ENST00000573716 MYD88Q99836 296 aa15.82■□□□□ 0.12
PRPF8-208ENST00000573716 ATP2B4P23634 1241 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms