RNA–Protein interactions for RNA: ENST00000568459.5

PKM-220, Transcript of pyruvate kinase M1/2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKM, Length 1,806 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-220ENST00000568459 USP44Q9H0E7 712 aa17.28■□□□□ 0.36
PKM-220ENST00000568459 AFDNP55196 1824 aaKnown RBP17.28■□□□□ 0.36
PKM-220ENST00000568459 UBTFL1P0CB47 393 aaPredicted RBP17.28■□□□□ 0.36
PKM-220ENST00000568459 ZSCAN22P10073 491 aaPredicted RBP17.28■□□□□ 0.36
PKM-220ENST00000568459 ZNF784Q8NCA9 323 aaPredicted RBP17.28■□□□□ 0.36
PKM-220ENST00000568459 KIF1BPQ96EK5 621 aa17.28■□□□□ 0.36
PKM-220ENST00000568459 KIAA1551Q9HCM1 1747 aa17.27■□□□□ 0.36
PKM-220ENST00000568459 SERPINB2P05120 415 aa17.27■□□□□ 0.36
PKM-220ENST00000568459 TPM3P06753 285 aa17.27■□□□□ 0.36
PKM-220ENST00000568459 GTF2F1P35269 517 aaKnown RBP eCLIP17.27■□□□□ 0.369e-7■■■□□ 17.3
PKM-220ENST00000568459 BICDL1Q6ZP65 573 aa17.27■□□□□ 0.36
PKM-220ENST00000568459 CNTROBQ8N137 903 aa17.27■□□□□ 0.36
PKM-220ENST00000568459 PI4K2BQ8TCG2 481 aa17.27■□□□□ 0.36
PKM-220ENST00000568459 KDM3BQ7LBC6 1761 aa17.27■□□□□ 0.35
PKM-220ENST00000568459 TTC41PQ6P2S7 1318 aa17.26■□□□□ 0.35
PKM-220ENST00000568459 PKNOX2Q96KN3 472 aa17.26■□□□□ 0.35
PKM-220ENST00000568459 LIMCH1Q9UPQ0 1083 aa17.26■□□□□ 0.35
PKM-220ENST00000568459 BCS1LQ9Y276 419 aa17.26■□□□□ 0.35
PKM-220ENST00000568459 LRRFIP2Q9Y608 721 aaKnown RBP17.26■□□□□ 0.35
PKM-220ENST00000568459 PTMAP06454 111 aaKnown RBP17.26■□□□□ 0.35
PKM-220ENST00000568459 PIP4K2AP48426 406 aaPredicted RBP17.26■□□□□ 0.35
PKM-220ENST00000568459 DZIP3Q86Y13 1208 aaKnown RBP17.26■□□□□ 0.35
PKM-220ENST00000568459 MYRIPQ8NFW9 859 aa17.26■□□□□ 0.35
PKM-220ENST00000568459 KCNB2Q92953 911 aa17.26■□□□□ 0.35
PKM-220ENST00000568459 TM6SF1Q9BZW5 370 aa17.26■□□□□ 0.35
PKM-220ENST00000568459 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.26■□□□□ 0.351e-16■□□□□ 9.6
PKM-220ENST00000568459 EIF4A1P60842 406 aaKnown RBP17.25■□□□□ 0.35
PKM-220ENST00000568459 ZSCAN31Q96LW9 406 aaPredicted RBP17.25■□□□□ 0.35
PKM-220ENST00000568459 LSG1Q9H089 658 aaKnown RBP17.25■□□□□ 0.35
PKM-220ENST00000568459 PIM2Q9P1W9 311 aa17.25■□□□□ 0.35
PKM-220ENST00000568459 SNX14Q9Y5W7 946 aa17.25■□□□□ 0.35
PKM-220ENST00000568459 BRCA1P38398 1863 aaKnown RBP17.25■□□□□ 0.35
PKM-220ENST00000568459 STX6O43752 255 aa17.24■□□□□ 0.35
PKM-220ENST00000568459 GIGYF1O75420 1035 aaPredicted RBP17.24■□□□□ 0.35
PKM-220ENST00000568459 TBC1D9BQ66K14 1250 aa17.24■□□□□ 0.35
PKM-220ENST00000568459 RHPN1Q8TCX5 695 aa17.24■□□□□ 0.35
PKM-220ENST00000568459 SH2B1Q9NRF2 756 aaPredicted RBP17.24■□□□□ 0.35
PKM-220ENST00000568459 SPTLC3Q9NUV7 552 aa17.24■□□□□ 0.35
PKM-220ENST00000568459 CAMTA2O94983 1202 aa17.24■□□□□ 0.35
PKM-220ENST00000568459 KCNA3P22001 575 aa17.24■□□□□ 0.35
PKM-220ENST00000568459 RNF214Q8ND24 703 aa17.24■□□□□ 0.35
PKM-220ENST00000568459 RUFY2Q8WXA3 655 aa17.24■□□□□ 0.35
PKM-220ENST00000568459 UPF3BQ9BZI7 483 aaKnown RBP17.24■□□□□ 0.35
PKM-220ENST00000568459 NRXN2Q9P2S2 1712 aa17.23■□□□□ 0.35
PKM-220ENST00000568459 SCN7AQ01118 1682 aa17.23■□□□□ 0.35
PKM-220ENST00000568459 GADD45BO75293 160 aaPredicted RBP17.23■□□□□ 0.35
PKM-220ENST00000568459 F13A1P00488 732 aa17.23■□□□□ 0.35
PKM-220ENST00000568459 TSHZ3Q63HK5 1081 aa17.23■□□□□ 0.35
PKM-220ENST00000568459 CHAMP1Q96JM3 812 aa17.23■□□□□ 0.35
PKM-220ENST00000568459 SETDB2Q96T68 719 aa17.23■□□□□ 0.35
PKM-220ENST00000568459 FUCA2Q9BTY2 467 aa17.23■□□□□ 0.35
PKM-220ENST00000568459 LAMB4A4D0S4 1761 aa17.23■□□□□ 0.35
PKM-220ENST00000568459 NBPF26B4DH59 902 aa17.22■□□□□ 0.35
PKM-220ENST00000568459 CHRNA5P30532 468 aa17.22■□□□□ 0.35
PKM-220ENST00000568459 MTX1Q13505 466 aa17.22■□□□□ 0.35
PKM-220ENST00000568459 VPS53Q5VIR6 699 aa17.22■□□□□ 0.35
PKM-220ENST00000568459 FOXD4L5Q5VV16 416 aaPredicted RBP17.22■□□□□ 0.35
PKM-220ENST00000568459 NBPF10Q6P3W6 841 aaKnown RBP17.22■□□□□ 0.35
PKM-220ENST00000568459 NBPF15Q8N660 670 aa17.22■□□□□ 0.35
PKM-220ENST00000568459 FOXD4L4Q8WXT5 416 aaPredicted RBP17.22■□□□□ 0.35
PKM-220ENST00000568459 CCDC171Q6TFL3 1326 aa17.22■□□□□ 0.35
PKM-220ENST00000568459 DALRD3Q5D0E6 543 aaKnown RBP17.21■□□□□ 0.35
PKM-220ENST00000568459 CLEC4GQ6UXB4 293 aa17.21■□□□□ 0.35
PKM-220ENST00000568459 FAM13BQ9NYF5 915 aa17.21■□□□□ 0.35
PKM-220ENST00000568459 HDAC5Q9UQL6 1122 aa17.21■□□□□ 0.35
PKM-220ENST00000568459 ZNF652Q9Y2D9 606 aa17.21■□□□□ 0.35
PKM-220ENST00000568459 ARFGEF1Q9Y6D6 1849 aa17.21■□□□□ 0.35
PKM-220ENST00000568459 NPHP1O15259 732 aa17.21■□□□□ 0.35
PKM-220ENST00000568459 KDM4AO75164 1064 aa17.21■□□□□ 0.35
PKM-220ENST00000568459 GLRX3O76003 335 aaKnown RBP17.21■□□□□ 0.35
PKM-220ENST00000568459 SYT1P21579 422 aa17.21■□□□□ 0.35
PKM-220ENST00000568459 ARHGAP27Q6ZUM4 889 aa17.21■□□□□ 0.35
PKM-220ENST00000568459 PPP1R42Q7Z4L9 355 aa17.21■□□□□ 0.35
PKM-220ENST00000568459 USP25Q9UHP3 1055 aa17.21■□□□□ 0.35
PKM-220ENST00000568459 CARMIL3Q8ND23 1372 aa17.21■□□□□ 0.34
PKM-220ENST00000568459 BCORQ6W2J9 1755 aa17.2■□□□□ 0.34
PKM-220ENST00000568459 NOLC1Q14978 699 aaKnown RBP eCLIP17.2■□□□□ 0.349e-12■□□□□ 10.3
PKM-220ENST00000568459 SMC3Q9UQE7 1217 aa17.2■□□□□ 0.34
PKM-220ENST00000568459 SURF6O75683 361 aaKnown RBP17.19■□□□□ 0.34
PKM-220ENST00000568459 AK2P54819 239 aa17.19■□□□□ 0.34
PKM-220ENST00000568459 SMAP1Q8IYB5 467 aaPredicted RBP17.19■□□□□ 0.34
PKM-220ENST00000568459 IL25Q9H293 177 aa17.19■□□□□ 0.34
PKM-220ENST00000568459 H0YIN7 160 aa17.19■□□□□ 0.34
PKM-220ENST00000568459 RUFY3Q7L099 469 aa17.19■□□□□ 0.34
PKM-220ENST00000568459 TCHHQ07283 1943 aa17.18■□□□□ 0.34
PKM-220ENST00000568459 RGL2O15211 777 aa17.18■□□□□ 0.34
PKM-220ENST00000568459 ADCY5O95622 1261 aa17.18■□□□□ 0.34
PKM-220ENST00000568459 RBM10P98175 930 aaKnown RBP17.18■□□□□ 0.34
PKM-220ENST00000568459 HDGFL1Q5TGJ6 251 aa17.18■□□□□ 0.34
PKM-220ENST00000568459 C2CD5Q86YS7 1000 aa17.18■□□□□ 0.34
PKM-220ENST00000568459 ZSWIM6Q9HCJ5 1215 aa17.18■□□□□ 0.34
PKM-220ENST00000568459 HYPKQ9NX55 129 aa17.18■□□□□ 0.34
PKM-220ENST00000568459 ELP1O95163 1332 aa17.18■□□□□ 0.34
PKM-220ENST00000568459 PDE6BP35913 854 aa17.17■□□□□ 0.34
PKM-220ENST00000568459 CNBD1Q8NA66 436 aa17.17■□□□□ 0.34
PKM-220ENST00000568459 BRIP1Q9BX63 1249 aa17.17■□□□□ 0.34
PKM-220ENST00000568459 SNRKQ9NRH2 765 aa17.17■□□□□ 0.34
PKM-220ENST00000568459 CNPY2Q9Y2B0 182 aa17.17■□□□□ 0.34
PKM-220ENST00000568459 HIP1O00291 1037 aa17.17■□□□□ 0.34
PKM-220ENST00000568459 MYL6BP14649 208 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms