RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 PTPN22Q9Y2R2 807 aa13.4□□□□□ -0.26
ABCD4-227ENST00000557554 TRIM17Q9Y577 477 aa13.4□□□□□ -0.26
ABCD4-227ENST00000557554 PITPNM2Q9BZ72 1349 aa13.39□□□□□ -0.27
ABCD4-227ENST00000557554 H0YGN5 161 aa13.39□□□□□ -0.27
ABCD4-227ENST00000557554 HTATSF1O43719 755 aaKnown RBP13.39□□□□□ -0.27
ABCD4-227ENST00000557554 DOK7Q18PE1 504 aa13.39□□□□□ -0.27
ABCD4-227ENST00000557554 PRAMEF18Q5VWM3 479 aa13.39□□□□□ -0.27
ABCD4-227ENST00000557554 GMLQ99445 158 aa13.39□□□□□ -0.27
ABCD4-227ENST00000557554 TIMELESSQ9UNS1 1208 aa13.39□□□□□ -0.27
ABCD4-227ENST00000557554 NSFL1CQ9UNZ2 370 aaKnown RBP13.39□□□□□ -0.27
ABCD4-227ENST00000557554 SCAF8Q9UPN6 1271 aaKnown RBP13.39□□□□□ -0.27
ABCD4-227ENST00000557554 SREBF2Q12772 1141 aa13.38□□□□□ -0.27
ABCD4-227ENST00000557554 RTF1Q92541 710 aaKnown RBP13.38□□□□□ -0.27
ABCD4-227ENST00000557554 NECTIN2Q92692 538 aa13.38□□□□□ -0.27
ABCD4-227ENST00000557554 ZNF609O15014 1411 aa13.38□□□□□ -0.27
ABCD4-227ENST00000557554 ALDH1A1P00352 501 aa13.37□□□□□ -0.27
ABCD4-227ENST00000557554 EIF4A1P60842 406 aaKnown RBP13.37□□□□□ -0.27
ABCD4-227ENST00000557554 EIF4G2P78344 907 aaKnown RBP eCLIP13.37□□□□□ -0.27
ABCD4-227ENST00000557554 GPSM2P81274 684 aa13.37□□□□□ -0.27
ABCD4-227ENST00000557554 CAP1Q01518 475 aa13.37□□□□□ -0.27
ABCD4-227ENST00000557554 PTPN12Q05209 780 aaKnown RBP13.37□□□□□ -0.27
ABCD4-227ENST00000557554 MKRN3Q13064 507 aaKnown RBP13.37□□□□□ -0.27
ABCD4-227ENST00000557554 PDIA6Q15084 440 aa13.37□□□□□ -0.27
ABCD4-227ENST00000557554 AGBL3Q8NEM8 1001 aa13.37□□□□□ -0.27
ABCD4-227ENST00000557554 CC2D1BQ5T0F9 858 aaKnown RBP13.36□□□□□ -0.27
ABCD4-227ENST00000557554 LDLRAD1Q5T700 205 aa13.36□□□□□ -0.27
ABCD4-227ENST00000557554 SPRYD7Q5W111 196 aa13.36□□□□□ -0.27
ABCD4-227ENST00000557554 NLRP10Q86W26 655 aa13.36□□□□□ -0.27
ABCD4-227ENST00000557554 TBC1D16Q8TBP0 767 aa13.36□□□□□ -0.27
ABCD4-227ENST00000557554 CELF1Q92879 486 aaKnown RBP13.36□□□□□ -0.27
ABCD4-227ENST00000557554 RBM27Q9P2N5 1060 aaKnown RBP13.36□□□□□ -0.27
ABCD4-227ENST00000557554 COL4A1P02462 1669 aa13.35□□□□□ -0.27
ABCD4-227ENST00000557554 C6orf229H3BNL8 230 aa13.35□□□□□ -0.27
ABCD4-227ENST00000557554 IFNL1Q8IU54 200 aa13.35□□□□□ -0.27
ABCD4-227ENST00000557554 ZNF333Q96JL9 665 aa13.35□□□□□ -0.27
ABCD4-227ENST00000557554 PRO3102Q9H379 93 aa13.35□□□□□ -0.27
ABCD4-227ENST00000557554 MYOZ2Q9NPC6 264 aa13.35□□□□□ -0.27
ABCD4-227ENST00000557554 DDX60Q8IY21 1712 aaKnown RBP13.34□□□□□ -0.27
ABCD4-227ENST00000557554 USP17L8P0C7I0 530 aa13.34□□□□□ -0.27
ABCD4-227ENST00000557554 INHBEP58166 350 aa13.34□□□□□ -0.27
ABCD4-227ENST00000557554 RSBN1LQ6PCB5 846 aaPredicted RBP13.34□□□□□ -0.27
ABCD4-227ENST00000557554 CHRDL2Q6WN34 429 aa13.34□□□□□ -0.27
ABCD4-227ENST00000557554 THUMPD2Q9BTF0 503 aaKnown RBP13.34□□□□□ -0.27
ABCD4-227ENST00000557554 KDM3BQ7LBC6 1761 aa13.33□□□□□ -0.28
ABCD4-227ENST00000557554 SF3B3Q15393 1217 aaKnown RBP13.33□□□□□ -0.28
ABCD4-227ENST00000557554 NBPF9Q3BBW0 867 aa13.33□□□□□ -0.28
ABCD4-227ENST00000557554 EYA3Q99504 573 aa13.33□□□□□ -0.28
ABCD4-227ENST00000557554 TRMT112Q9UI30 125 aaKnown RBP13.33□□□□□ -0.28
ABCD4-227ENST00000557554 ERBB4Q15303 1308 aa13.33□□□□□ -0.28
ABCD4-227ENST00000557554 PSME4Q14997 1843 aa13.32□□□□□ -0.28
ABCD4-227ENST00000557554 IGF2BP3O00425 579 aaKnown RBP eCLIP13.32□□□□□ -0.28
ABCD4-227ENST00000557554 MNX1P50219 401 aaPredicted RBP13.32□□□□□ -0.28
ABCD4-227ENST00000557554 CD99L2Q8TCZ2 262 aa13.32□□□□□ -0.28
ABCD4-227ENST00000557554 ERO1AQ96HE7 468 aa13.32□□□□□ -0.28
ABCD4-227ENST00000557554 TMEM106CQ9BVX2 250 aa13.32□□□□□ -0.28
ABCD4-227ENST00000557554 ZC3H12CQ9C0D7 883 aaKnown RBP13.32□□□□□ -0.28
ABCD4-227ENST00000557554 PODXL2Q9NZ53 605 aa13.32□□□□□ -0.28
ABCD4-227ENST00000557554 SH3TC1Q8TE82 1336 aa13.32□□□□□ -0.28
ABCD4-227ENST00000557554 LAMB1P07942 1786 aa13.31□□□□□ -0.28
ABCD4-227ENST00000557554 MANSC4A6NHS7 340 aaPredicted RBP13.31□□□□□ -0.28
ABCD4-227ENST00000557554 TRIM26Q12899 539 aaPredicted RBP13.31□□□□□ -0.28
ABCD4-227ENST00000557554 TCIRG1Q13488 830 aa13.31□□□□□ -0.28
ABCD4-227ENST00000557554 TTLL12Q14166 644 aaPredicted RBP13.31□□□□□ -0.28
ABCD4-227ENST00000557554 PROSER3Q2NL68 480 aa13.31□□□□□ -0.28
ABCD4-227ENST00000557554 PNISRQ8TF01 805 aaKnown RBP13.31□□□□□ -0.28
ABCD4-227ENST00000557554 EFCC1Q9HA90 598 aa13.3□□□□□ -0.28
ABCD4-227ENST00000557554 LAMA3Q16787 3333 aa13.29□□□□□ -0.28
ABCD4-227ENST00000557554 WNT10BO00744 389 aa13.29□□□□□ -0.28
ABCD4-227ENST00000557554 RPS8P62241 208 aaKnown RBP13.29□□□□□ -0.28
ABCD4-227ENST00000557554 CRHR2Q13324 411 aa13.29□□□□□ -0.28
ABCD4-227ENST00000557554 ANXA1P04083 346 aa13.28□□□□□ -0.28
ABCD4-227ENST00000557554 NF2P35240 595 aa13.28□□□□□ -0.28
ABCD4-227ENST00000557554 SP3Q02447 781 aa13.28□□□□□ -0.28
ABCD4-227ENST00000557554 MAP3K11Q16584 847 aa13.28□□□□□ -0.28
ABCD4-227ENST00000557554 HSP90AB3PQ58FF7 597 aa13.28□□□□□ -0.28
ABCD4-227ENST00000557554 COPS6Q7L5N1 327 aa13.28□□□□□ -0.28
ABCD4-227ENST00000557554 ARMC9Q7Z3E5 817 aa13.28□□□□□ -0.28
ABCD4-227ENST00000557554 PTPN18Q99952 460 aa13.28□□□□□ -0.28
ABCD4-227ENST00000557554 USP17L3A6NCW0 530 aa13.27□□□□□ -0.29
ABCD4-227ENST00000557554 USP17L4A6NCW7 530 aa13.27□□□□□ -0.29
ABCD4-227ENST00000557554 WTIPA6NIX2 430 aaPredicted RBP13.27□□□□□ -0.29
ABCD4-227ENST00000557554 ZBTB48P10074 688 aaPredicted RBP13.27□□□□□ -0.29
ABCD4-227ENST00000557554 PRKG1Q13976 671 aa13.27□□□□□ -0.29
ABCD4-227ENST00000557554 USP17L1Q7RTZ2 530 aa13.27□□□□□ -0.29
ABCD4-227ENST00000557554 SLC10A4Q96EP9 437 aa13.27□□□□□ -0.29
ABCD4-227ENST00000557554 PCGF6Q9BYE7 350 aa13.27□□□□□ -0.29
ABCD4-227ENST00000557554 FZD1Q9UP38 647 aa13.27□□□□□ -0.29
ABCD4-227ENST00000557554 TESPA1A2RU30 521 aaPredicted RBP13.26□□□□□ -0.29
ABCD4-227ENST00000557554 SOX1O00570 391 aaPredicted RBP13.26□□□□□ -0.29
ABCD4-227ENST00000557554 U2AF1L5P0DN76 240 aaPredicted RBP13.26□□□□□ -0.29
ABCD4-227ENST00000557554 U2AF1Q01081 240 aaKnown RBP eCLIP13.26□□□□□ -0.29
ABCD4-227ENST00000557554 PODNQ7Z5L7 613 aa13.26□□□□□ -0.29
ABCD4-227ENST00000557554 NBPF11Q86T75 865 aa13.26□□□□□ -0.29
ABCD4-227ENST00000557554 DLG5Q8TDM6 1919 aa13.26□□□□□ -0.29
ABCD4-227ENST00000557554 ZNF428Q96B54 188 aa13.26□□□□□ -0.29
ABCD4-227ENST00000557554 FAM89AQ96GI7 184 aa13.26□□□□□ -0.29
ABCD4-227ENST00000557554 ANGEL1Q9UNK9 670 aaKnown RBP13.26□□□□□ -0.29
ABCD4-227ENST00000557554 PTCH2Q9Y6C5 1203 aa13.26□□□□□ -0.29
ABCD4-227ENST00000557554 G3V3G9 751 aa13.25□□□□□ -0.29
ABCD4-227ENST00000557554 SLC4A8Q2Y0W8 1093 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms