RNA–Protein interactions for RNA: ENST00000543957.5

ITM2C-209, Transcript of integral membrane protein 2C, humanhuman

TSL 5

Gene ITM2C, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-209ENST00000543957 LRP10Q7Z4F1 713 aa16.07■□□□□ 0.16
ITM2C-209ENST00000543957 SH3TC1Q8TE82 1336 aa16.07■□□□□ 0.16
ITM2C-209ENST00000543957 TAF1P21675 1872 aa16.06■□□□□ 0.16
ITM2C-209ENST00000543957 MKRN3Q13064 507 aaKnown RBP16.06■□□□□ 0.16
ITM2C-209ENST00000543957 HSP90AB3PQ58FF7 597 aa16.06■□□□□ 0.16
ITM2C-209ENST00000543957 CFHR5Q9BXR6 569 aa16.06■□□□□ 0.16
ITM2C-209ENST00000543957 R3HDMLQ9H3Y0 253 aa16.06■□□□□ 0.16
ITM2C-209ENST00000543957 LRRC37AA6NMS7 1700 aa16.05■□□□□ 0.16
ITM2C-209ENST00000543957 PITPNM2Q9BZ72 1349 aa16.05■□□□□ 0.16
ITM2C-209ENST00000543957 SREBF2Q12772 1141 aa16.05■□□□□ 0.16
ITM2C-209ENST00000543957 PDIA6Q15084 440 aa16.05■□□□□ 0.16
ITM2C-209ENST00000543957 CELF1Q92879 486 aaKnown RBP16.05■□□□□ 0.16
ITM2C-209ENST00000543957 TRIM17Q9Y577 477 aa16.05■□□□□ 0.16
ITM2C-209ENST00000543957 TTLL12Q14166 644 aaPredicted RBP16.04■□□□□ 0.16
ITM2C-209ENST00000543957 PRAMEF18Q5VWM3 479 aa16.04■□□□□ 0.16
ITM2C-209ENST00000543957 AGBL3Q8NEM8 1001 aa16.04■□□□□ 0.16
ITM2C-209ENST00000543957 TBC1D16Q8TBP0 767 aa16.04■□□□□ 0.16
ITM2C-209ENST00000543957 ZC3H12CQ9C0D7 883 aaKnown RBP16.04■□□□□ 0.16
ITM2C-209ENST00000543957 SCAF8Q9UPN6 1271 aaKnown RBP16.04■□□□□ 0.16
ITM2C-209ENST00000543957 COLQQ9Y215 455 aaPredicted RBP16.04■□□□□ 0.16
ITM2C-209ENST00000543957 KDM3BQ7LBC6 1761 aa16.04■□□□□ 0.16
ITM2C-209ENST00000543957 KIAA0100Q14667 2235 aaKnown RBP16.04■□□□□ 0.16
ITM2C-209ENST00000543957 G3V3G9 751 aa16.03■□□□□ 0.16
ITM2C-209ENST00000543957 ANXA1P04083 346 aa16.03■□□□□ 0.16
ITM2C-209ENST00000543957 EIF2S2P20042 333 aaKnown RBP16.03■□□□□ 0.16
ITM2C-209ENST00000543957 TCIRG1Q13488 830 aa16.03■□□□□ 0.16
ITM2C-209ENST00000543957 PROSER3Q2NL68 480 aa16.03■□□□□ 0.16
ITM2C-209ENST00000543957 DCAF8Q5TAQ9 597 aa16.03■□□□□ 0.16
ITM2C-209ENST00000543957 RSBN1LQ6PCB5 846 aaPredicted RBP16.03■□□□□ 0.16
ITM2C-209ENST00000543957 USP17L8P0C7I0 530 aa16.02■□□□□ 0.16
ITM2C-209ENST00000543957 EN2P19622 333 aaPredicted RBP16.02■□□□□ 0.16
ITM2C-209ENST00000543957 COPS6Q7L5N1 327 aa16.02■□□□□ 0.16
ITM2C-209ENST00000543957 OTOP1Q7RTM1 612 aa16.02■□□□□ 0.16
ITM2C-209ENST00000543957 NECTIN2Q92692 538 aa16.02■□□□□ 0.16
ITM2C-209ENST00000543957 ZNF428Q96B54 188 aa16.02■□□□□ 0.16
ITM2C-209ENST00000543957 MYOZ2Q9NPC6 264 aa16.02■□□□□ 0.16
ITM2C-209ENST00000543957 SCN9AQ15858 1988 aa16.02■□□□□ 0.15
ITM2C-209ENST00000543957 ALDH1A1P00352 501 aa16.01■□□□□ 0.15
ITM2C-209ENST00000543957 AIMP1Q12904 312 aaKnown RBP16.01■□□□□ 0.15
ITM2C-209ENST00000543957 SF3B3Q15393 1217 aaKnown RBP16.01■□□□□ 0.15
ITM2C-209ENST00000543957 DDX60Q8IY21 1712 aaKnown RBP16■□□□□ 0.15
ITM2C-209ENST00000543957 HTTP42858 3142 aa16■□□□□ 0.15
ITM2C-209ENST00000543957 DLL1O00548 723 aa16■□□□□ 0.15
ITM2C-209ENST00000543957 NF2P35240 595 aa16■□□□□ 0.15
ITM2C-209ENST00000543957 GMLQ99445 158 aa16■□□□□ 0.15
ITM2C-209ENST00000543957 ZNF609O15014 1411 aa16■□□□□ 0.15
ITM2C-209ENST00000543957 TRIOBPQ9H2D6 2365 aa15.99■□□□□ 0.15
ITM2C-209ENST00000543957 NEFMP07197 916 aa15.99■□□□□ 0.15
ITM2C-209ENST00000543957 RPS8P62241 208 aaKnown RBP15.99■□□□□ 0.15
ITM2C-209ENST00000543957 PTPN12Q05209 780 aaKnown RBP15.99■□□□□ 0.15
ITM2C-209ENST00000543957 XAGE3Q8WTP9 111 aa15.99■□□□□ 0.15
ITM2C-209ENST00000543957 UFL1O94874 794 aa15.98■□□□□ 0.15
ITM2C-209ENST00000543957 ARMC5Q96C12 935 aa15.98■□□□□ 0.15
ITM2C-209ENST00000543957 FAM89AQ96GI7 184 aa15.98■□□□□ 0.15
ITM2C-209ENST00000543957 PODXL2Q9NZ53 605 aa15.98■□□□□ 0.15
ITM2C-209ENST00000543957 TSPYL4Q9UJ04 414 aa15.98■□□□□ 0.15
ITM2C-209ENST00000543957 PTPN22Q9Y2R2 807 aa15.98■□□□□ 0.15
ITM2C-209ENST00000543957 CENPFP49454 3210 aa15.98■□□□□ 0.15
ITM2C-209ENST00000543957 NBPF9Q3BBW0 867 aa15.97■□□□□ 0.15
ITM2C-209ENST00000543957 SPRYD7Q5W111 196 aa15.97■□□□□ 0.15
ITM2C-209ENST00000543957 ARMC9Q7Z3E5 817 aa15.97■□□□□ 0.15
ITM2C-209ENST00000543957 ANKIB1Q9P2G1 1089 aa15.97■□□□□ 0.15
ITM2C-209ENST00000543957 COL4A1P02462 1669 aa15.96■□□□□ 0.15
ITM2C-209ENST00000543957 PPP2R1AP30153 589 aa15.96■□□□□ 0.15
ITM2C-209ENST00000543957 INHBEP58166 350 aa15.96■□□□□ 0.15
ITM2C-209ENST00000543957 PRKG1Q13976 671 aa15.96■□□□□ 0.15
ITM2C-209ENST00000543957 ERO1AQ96HE7 468 aa15.96■□□□□ 0.15
ITM2C-209ENST00000543957 TMEM106CQ9BVX2 250 aa15.96■□□□□ 0.15
ITM2C-209ENST00000543957 GGA1Q9UJY5 639 aa15.96■□□□□ 0.15
ITM2C-209ENST00000543957 CEP290O15078 2479 aa15.96■□□□□ 0.15
ITM2C-209ENST00000543957 BRCA2P51587 3418 aa15.96■□□□□ 0.15
ITM2C-209ENST00000543957 SZT2Q5T011 3432 aa15.96■□□□□ 0.14
ITM2C-209ENST00000543957 RBBP6Q7Z6E9 1792 aaKnown RBP15.95■□□□□ 0.14
ITM2C-209ENST00000543957 USP17L3A6NCW0 530 aa15.95■□□□□ 0.14
ITM2C-209ENST00000543957 USP17L4A6NCW7 530 aa15.95■□□□□ 0.14
ITM2C-209ENST00000543957 MANSC4A6NHS7 340 aaPredicted RBP15.95■□□□□ 0.14
ITM2C-209ENST00000543957 USP17L1Q7RTZ2 530 aa15.95■□□□□ 0.14
ITM2C-209ENST00000543957 IFNL1Q8IU54 200 aa15.95■□□□□ 0.14
ITM2C-209ENST00000543957 NFE2L2Q16236 605 aa15.94■□□□□ 0.14
ITM2C-209ENST00000543957 LDLRAD1Q5T700 205 aa15.94■□□□□ 0.14
ITM2C-209ENST00000543957 OTUD5Q96G74 571 aa15.94■□□□□ 0.14
ITM2C-209ENST00000543957 DLG5Q8TDM6 1919 aa15.94■□□□□ 0.14
ITM2C-209ENST00000543957 H0YGN5 161 aa15.93■□□□□ 0.14
ITM2C-209ENST00000543957 WNT10BO00744 389 aa15.93■□□□□ 0.14
ITM2C-209ENST00000543957 RTL5Q5HYW3 569 aaPredicted RBP15.93■□□□□ 0.14
ITM2C-209ENST00000543957 PODNQ7Z5L7 613 aa15.93■□□□□ 0.14
ITM2C-209ENST00000543957 OGFOD1Q8N543 542 aa15.93■□□□□ 0.14
ITM2C-209ENST00000543957 SLC17A8Q8NDX2 589 aa15.93■□□□□ 0.14
ITM2C-209ENST00000543957 CD99L2Q8TCZ2 262 aa15.93■□□□□ 0.14
ITM2C-209ENST00000543957 ISCA1Q9BUE6 129 aa15.93■□□□□ 0.14
ITM2C-209ENST00000543957 EFCC1Q9HA90 598 aa15.93■□□□□ 0.14
ITM2C-209ENST00000543957 ANGEL1Q9UNK9 670 aaKnown RBP15.93■□□□□ 0.14
ITM2C-209ENST00000543957 ATP5J2-PTCD1G3V325 749 aa15.92■□□□□ 0.14
ITM2C-209ENST00000543957 IRS4O14654 1257 aaPredicted RBP15.92■□□□□ 0.14
ITM2C-209ENST00000543957 SLC10A4Q96EP9 437 aa15.92■□□□□ 0.14
ITM2C-209ENST00000543957 PLEKHF1Q96S99 279 aa15.92■□□□□ 0.14
ITM2C-209ENST00000543957 SEC31BQ9NQW1 1179 aa15.92■□□□□ 0.14
ITM2C-209ENST00000543957 IGF2BP3O00425 579 aaKnown RBP eCLIP15.91■□□□□ 0.14
ITM2C-209ENST00000543957 PLBD2Q8NHP8 589 aa15.91■□□□□ 0.14
ITM2C-209ENST00000543957 ZNF333Q96JL9 665 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms