RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 CARNS1A5YM72 827 aa7.23□□□□□ -1.25
LEMD3-204ENST00000542032 SOX18P35713 384 aa7.23□□□□□ -1.25
LEMD3-204ENST00000542032 ZAP70P43403 619 aa7.23□□□□□ -1.25
LEMD3-204ENST00000542032 NRLP54845 237 aa7.23□□□□□ -1.25
LEMD3-204ENST00000542032 FAM13BQ9NYF5 915 aa7.23□□□□□ -1.25
LEMD3-204ENST00000542032 TLR7Q9NYK1 1049 aaKnown RBP7.23□□□□□ -1.25
LEMD3-204ENST00000542032 FRRS1LQ9P0K9 344 aa7.23□□□□□ -1.25
LEMD3-204ENST00000542032 USTQ9Y2C2 406 aa7.23□□□□□ -1.25
LEMD3-204ENST00000542032 LILRB5O75023 590 aa7.22□□□□□ -1.25
LEMD3-204ENST00000542032 GRIK5Q16478 980 aa7.22□□□□□ -1.25
LEMD3-204ENST00000542032 PSAPL1Q6NUJ1 521 aa7.22□□□□□ -1.25
LEMD3-204ENST00000542032 PIK3R5Q8WYR1 880 aa7.22□□□□□ -1.25
LEMD3-204ENST00000542032 TTC9Q92623 222 aa7.22□□□□□ -1.25
LEMD3-204ENST00000542032 LPIN3Q9BQK8 851 aa7.22□□□□□ -1.25
LEMD3-204ENST00000542032 IGFLR1Q9H665 355 aa7.22□□□□□ -1.25
LEMD3-204ENST00000542032 SPDYE3A6NKU9 549 aa7.21□□□□□ -1.26
LEMD3-204ENST00000542032 SUPT5HO00267 1087 aaKnown RBP7.21□□□□□ -1.26
LEMD3-204ENST00000542032 MMP20O60882 483 aa7.21□□□□□ -1.26
LEMD3-204ENST00000542032 NPR3P17342 541 aa7.21□□□□□ -1.26
LEMD3-204ENST00000542032 AFF1P51825 1210 aaKnown RBP7.21□□□□□ -1.26
LEMD3-204ENST00000542032 TBC1D8BQ0IIM8 1120 aa7.21□□□□□ -1.26
LEMD3-204ENST00000542032 NLRP13Q86W25 1043 aa7.21□□□□□ -1.26
LEMD3-204ENST00000542032 PCMTD2Q9NV79 361 aa7.21□□□□□ -1.26
LEMD3-204ENST00000542032 PERM1Q5SV97 790 aa7.2□□□□□ -1.26
LEMD3-204ENST00000542032 FAM35AQ86V20 835 aa7.2□□□□□ -1.26
LEMD3-204ENST00000542032 GTF3C2Q8WUA4 911 aaPredicted RBP7.2□□□□□ -1.26
LEMD3-204ENST00000542032 NACC1Q96RE7 527 aa7.2□□□□□ -1.26
LEMD3-204ENST00000542032 RNF112Q9ULX5 631 aa7.2□□□□□ -1.26
LEMD3-204ENST00000542032 GPR152Q8TDT2 470 aa7.19□□□□□ -1.26
LEMD3-204ENST00000542032 NUDT8Q8WV74 236 aa7.19□□□□□ -1.26
LEMD3-204ENST00000542032 JPH1Q9HDC5 661 aaPredicted RBP7.19□□□□□ -1.26
LEMD3-204ENST00000542032 UBAP1LF5GYI3 381 aa7.18□□□□□ -1.26
LEMD3-204ENST00000542032 RGS9O75916 674 aaPredicted RBP7.18□□□□□ -1.26
LEMD3-204ENST00000542032 CPB1P15086 417 aa7.18□□□□□ -1.26
LEMD3-204ENST00000542032 ARID4AP29374 1257 aaPredicted RBP7.18□□□□□ -1.26
LEMD3-204ENST00000542032 PLAURQ03405 335 aa7.18□□□□□ -1.26
LEMD3-204ENST00000542032 GRIK4Q16099 956 aa7.18□□□□□ -1.26
LEMD3-204ENST00000542032 OR13H1Q8NG92 308 aa7.18□□□□□ -1.26
LEMD3-204ENST00000542032 FNDC3AQ9Y2H6 1198 aaKnown RBP7.18□□□□□ -1.26
LEMD3-204ENST00000542032 LOC102724428A0A0B4J2F2 783 aa7.17□□□□□ -1.26
LEMD3-204ENST00000542032 PSAPP07602 524 aa7.17□□□□□ -1.26
LEMD3-204ENST00000542032 MPSTP25325 297 aa7.17□□□□□ -1.26
LEMD3-204ENST00000542032 SIK1P57059 783 aa7.17□□□□□ -1.26
LEMD3-204ENST00000542032 MLLT1Q03111 559 aaPredicted RBP7.17□□□□□ -1.26
LEMD3-204ENST00000542032 NOM1Q5C9Z4 860 aaKnown RBP7.17□□□□□ -1.26
LEMD3-204ENST00000542032 XKR5Q6UX68 686 aa7.17□□□□□ -1.26
LEMD3-204ENST00000542032 ATCAYQ86WG3 371 aa7.17□□□□□ -1.26
LEMD3-204ENST00000542032 NUDT16Q96DE0 195 aaKnown RBP7.17□□□□□ -1.26
LEMD3-204ENST00000542032 A0A0A0MRY4 1105 aa7.16□□□□□ -1.26
LEMD3-204ENST00000542032 EIF1AXP47813 144 aaKnown RBP7.16□□□□□ -1.26
LEMD3-204ENST00000542032 MSL1Q68DK7 614 aa7.16□□□□□ -1.26
LEMD3-204ENST00000542032 PDE12Q6L8Q7 609 aaKnown RBP7.16□□□□□ -1.26
LEMD3-204ENST00000542032 TP53INP1Q96A56 240 aa7.16□□□□□ -1.26
LEMD3-204ENST00000542032 J3QW42 95 aa7.15□□□□□ -1.26
LEMD3-204ENST00000542032 KIF4AO95239 1232 aa7.15□□□□□ -1.26
LEMD3-204ENST00000542032 TRIM28Q13263 835 aaKnown RBP7.15□□□□□ -1.26
LEMD3-204ENST00000542032 ELMSAN1Q6PJG2 1045 aa7.15□□□□□ -1.26
LEMD3-204ENST00000542032 HFE2Q6ZVN8 426 aa7.15□□□□□ -1.26
LEMD3-204ENST00000542032 PDGFAP04085 211 aa7.14□□□□□ -1.27
LEMD3-204ENST00000542032 RPLP1P05386 114 aaKnown RBP7.14□□□□□ -1.27
LEMD3-204ENST00000542032 MZF1P28698 734 aaPredicted RBP7.14□□□□□ -1.27
LEMD3-204ENST00000542032 SF3B2Q13435 895 aaKnown RBP7.14□□□□□ -1.27
LEMD3-204ENST00000542032 MTMR3Q13615 1198 aa7.14□□□□□ -1.27
LEMD3-204ENST00000542032 TRAPPC3LQ5T215 181 aa7.14□□□□□ -1.27
LEMD3-204ENST00000542032 COL13A1Q5TAT6 717 aaPredicted RBP7.14□□□□□ -1.27
LEMD3-204ENST00000542032 FMR1NBQ8N0W7 255 aaPredicted RBP7.14□□□□□ -1.27
LEMD3-204ENST00000542032 EDEM1Q92611 657 aa7.14□□□□□ -1.27
LEMD3-204ENST00000542032 PLD4Q96BZ4 506 aa7.14□□□□□ -1.27
LEMD3-204ENST00000542032 ARID3AQ99856 593 aa7.14□□□□□ -1.27
LEMD3-204ENST00000542032 SMG9Q9H0W8 520 aaKnown RBP7.14□□□□□ -1.27
LEMD3-204ENST00000542032 GGNBP2Q9H3C7 697 aa7.14□□□□□ -1.27
LEMD3-204ENST00000542032 ABI2Q9NYB9 513 aaPredicted RBP7.14□□□□□ -1.27
LEMD3-204ENST00000542032 TMEM63CQ9P1W3 806 aa7.14□□□□□ -1.27
LEMD3-204ENST00000542032 MTMR7Q9Y216 660 aa7.14□□□□□ -1.27
LEMD3-204ENST00000542032 EIF2AK2P19525 551 aaKnown RBP7.13□□□□□ -1.27
LEMD3-204ENST00000542032 FKBP4Q02790 459 aaKnown RBP eCLIP7.13□□□□□ -1.27
LEMD3-204ENST00000542032 ALKBH2Q6NS38 261 aa7.13□□□□□ -1.27
LEMD3-204ENST00000542032 DTWD1Q8N5C7 304 aa7.13□□□□□ -1.27
LEMD3-204ENST00000542032 RETREG2Q8NC44 543 aa7.13□□□□□ -1.27
LEMD3-204ENST00000542032 NSUN5Q96P11 429 aaKnown RBP7.13□□□□□ -1.27
LEMD3-204ENST00000542032 ELP3Q9H9T3 547 aa7.13□□□□□ -1.27
LEMD3-204ENST00000542032 EGFL7Q9UHF1 273 aa7.13□□□□□ -1.27
LEMD3-204ENST00000542032 FAM13AO94988 1023 aa7.12□□□□□ -1.27
LEMD3-204ENST00000542032 SELPP16109 830 aa7.12□□□□□ -1.27
LEMD3-204ENST00000542032 MBTPS1Q14703 1052 aa7.12□□□□□ -1.27
LEMD3-204ENST00000542032 ECM1Q16610 540 aa7.12□□□□□ -1.27
LEMD3-204ENST00000542032 B4GALNT3Q6L9W6 998 aa7.12□□□□□ -1.27
LEMD3-204ENST00000542032 DMRTC2Q8IXT2 367 aaPredicted RBP7.12□□□□□ -1.27
LEMD3-204ENST00000542032 FZD6O60353 706 aa7.11□□□□□ -1.27
LEMD3-204ENST00000542032 GHRHP01286 108 aa7.11□□□□□ -1.27
LEMD3-204ENST00000542032 CYP2E1P05181 493 aaPredicted RBP7.11□□□□□ -1.27
LEMD3-204ENST00000542032 SSTR4P31391 388 aa7.11□□□□□ -1.27
LEMD3-204ENST00000542032 RAC1P63000 192 aa7.11□□□□□ -1.27
LEMD3-204ENST00000542032 DNM1Q05193 864 aaKnown RBP7.11□□□□□ -1.27
LEMD3-204ENST00000542032 HYAL2Q12891 473 aa7.11□□□□□ -1.27
LEMD3-204ENST00000542032 ADGRE1Q14246 886 aa7.11□□□□□ -1.27
LEMD3-204ENST00000542032 TTC39BQ5VTQ0 682 aaPredicted RBP7.11□□□□□ -1.27
LEMD3-204ENST00000542032 TXNDC2Q86VQ3 553 aa7.11□□□□□ -1.27
LEMD3-204ENST00000542032 CNTN3Q9P232 1028 aa7.11□□□□□ -1.27
LEMD3-204ENST00000542032 OAS3Q9Y6K5 1087 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms