RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 ADGRG1Q9Y653 693 aa8.38□□□□□ -1.07
CLTCL1-206ENST00000540896 PAPPAQ13219 1627 aa8.38□□□□□ -1.07
CLTCL1-206ENST00000540896 KCPQ6ZWJ8 1503 aa8.38□□□□□ -1.07
CLTCL1-206ENST00000540896 PI4KAP2A4QPH2 592 aa8.37□□□□□ -1.07
CLTCL1-206ENST00000540896 ZPR1O75312 459 aa8.37□□□□□ -1.07
CLTCL1-206ENST00000540896 CYP19A1P11511 503 aaPredicted RBP8.37□□□□□ -1.07
CLTCL1-206ENST00000540896 COPS2P61201 443 aa8.37□□□□□ -1.07
CLTCL1-206ENST00000540896 NBPF14Q5TI25 921 aa8.37□□□□□ -1.07
CLTCL1-206ENST00000540896 KSR2Q6VAB6 950 aa8.37□□□□□ -1.07
CLTCL1-206ENST00000540896 PI4KAP1Q8N8J0 262 aa8.37□□□□□ -1.07
CLTCL1-206ENST00000540896 LINC00116Q8NCU8 138 aa8.37□□□□□ -1.07
CLTCL1-206ENST00000540896 MAP3K2Q9Y2U5 619 aa8.37□□□□□ -1.07
CLTCL1-206ENST00000540896 UBR2Q8IWV8 1755 aa8.37□□□□□ -1.07
CLTCL1-206ENST00000540896 RREB1Q92766 1687 aa8.37□□□□□ -1.07
CLTCL1-206ENST00000540896 ABCC4O15439 1325 aa8.36□□□□□ -1.07
CLTCL1-206ENST00000540896 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.36□□□□□ -1.07
CLTCL1-206ENST00000540896 NEXNQ0ZGT2 675 aa8.36□□□□□ -1.07
CLTCL1-206ENST00000540896 AAMPQ13685 434 aa8.36□□□□□ -1.07
CLTCL1-206ENST00000540896 INTS3Q68E01 1043 aaKnown RBP8.36□□□□□ -1.07
CLTCL1-206ENST00000540896 NBPF10Q6P3W6 841 aaKnown RBP8.36□□□□□ -1.07
CLTCL1-206ENST00000540896 KIF6Q6ZMV9 814 aa8.36□□□□□ -1.07
CLTCL1-206ENST00000540896 NBPF15Q8N660 670 aa8.36□□□□□ -1.07
CLTCL1-206ENST00000540896 DNAAF4Q8WXU2 420 aa8.36□□□□□ -1.07
CLTCL1-206ENST00000540896 CCDC87Q9NVE4 849 aa8.36□□□□□ -1.07
CLTCL1-206ENST00000540896 STK32BQ9NY57 414 aa8.36□□□□□ -1.07
CLTCL1-206ENST00000540896 C5P01031 1676 aa8.36□□□□□ -1.07
CLTCL1-206ENST00000540896 ZNF831Q5JPB2 1677 aa8.36□□□□□ -1.07
CLTCL1-206ENST00000540896 NUP188Q5SRE5 1749 aa8.35□□□□□ -1.07
CLTCL1-206ENST00000540896 RCCD1A6NED2 376 aa8.35□□□□□ -1.07
CLTCL1-206ENST00000540896 NRG2O14511 850 aaPredicted RBP8.35□□□□□ -1.07
CLTCL1-206ENST00000540896 CRKLP46109 303 aaKnown RBP8.35□□□□□ -1.07
CLTCL1-206ENST00000540896 SLC15A2Q16348 729 aa8.35□□□□□ -1.07
CLTCL1-206ENST00000540896 B4GALNT3Q6L9W6 998 aa8.35□□□□□ -1.07
CLTCL1-206ENST00000540896 SRCIN1Q9C0H9 1055 aa8.35□□□□□ -1.07
CLTCL1-206ENST00000540896 TFCP2L1Q9NZI6 479 aa8.35□□□□□ -1.07
CLTCL1-206ENST00000540896 TJP1Q07157 1748 aa8.34□□□□□ -1.07
CLTCL1-206ENST00000540896 SRCAPQ6ZRS2 3230 aa8.34□□□□□ -1.07
CLTCL1-206ENST00000540896 TAF1LQ8IZX4 1826 aa8.34□□□□□ -1.07
CLTCL1-206ENST00000540896 GNPATO15228 680 aa8.34□□□□□ -1.07
CLTCL1-206ENST00000540896 IL6STP40189 918 aaPredicted RBP8.34□□□□□ -1.07
CLTCL1-206ENST00000540896 ZNF827Q17R98 1081 aa8.34□□□□□ -1.07
CLTCL1-206ENST00000540896 RC3H1Q5TC82 1133 aaKnown RBP8.34□□□□□ -1.07
CLTCL1-206ENST00000540896 INTS5Q6P9B9 1019 aaKnown RBP8.34□□□□□ -1.07
CLTCL1-206ENST00000540896 TTLL7Q6ZT98 887 aa8.34□□□□□ -1.07
CLTCL1-206ENST00000540896 PLBD2Q8NHP8 589 aa8.34□□□□□ -1.07
CLTCL1-206ENST00000540896 AK7Q96M32 723 aa8.34□□□□□ -1.07
CLTCL1-206ENST00000540896 MYD88Q99836 296 aa8.34□□□□□ -1.07
CLTCL1-206ENST00000540896 ZBTB3Q9H5J0 574 aa8.34□□□□□ -1.07
CLTCL1-206ENST00000540896 ZBTB1Q9Y2K1 713 aa8.34□□□□□ -1.07
CLTCL1-206ENST00000540896 CNTNAP4Q9C0A0 1308 aa8.33□□□□□ -1.08
CLTCL1-206ENST00000540896 SEMA3EO15041 775 aa8.33□□□□□ -1.08
CLTCL1-206ENST00000540896 ZBTB7BO15156 539 aaPredicted RBP8.33□□□□□ -1.08
CLTCL1-206ENST00000540896 ACTN4O43707 911 aaKnown RBP8.33□□□□□ -1.08
CLTCL1-206ENST00000540896 C4BP0C0L5 1744 aa8.33□□□□□ -1.08
CLTCL1-206ENST00000540896 COL5A3P25940 1745 aaPredicted RBP8.33□□□□□ -1.08
CLTCL1-206ENST00000540896 HIC1Q14526 733 aa8.33□□□□□ -1.08
CLTCL1-206ENST00000540896 R3HDM1Q15032 1099 aaKnown RBP8.33□□□□□ -1.08
CLTCL1-206ENST00000540896 LINS1Q8NG48 757 aa8.33□□□□□ -1.08
CLTCL1-206ENST00000540896 NKX2-3Q8TAU0 364 aa8.33□□□□□ -1.08
CLTCL1-206ENST00000540896 METTL22Q9BUU2 404 aaPredicted RBP8.33□□□□□ -1.08
CLTCL1-206ENST00000540896 ZBTB40Q9NUA8 1239 aa8.33□□□□□ -1.08
CLTCL1-206ENST00000540896 C9orf78Q9NZ63 289 aaPredicted RBP8.33□□□□□ -1.08
CLTCL1-206ENST00000540896 TBC1D2BQ9UPU7 963 aa8.33□□□□□ -1.08
CLTCL1-206ENST00000540896 CICQ96RK0 1608 aaPredicted RBP8.32□□□□□ -1.08
CLTCL1-206ENST00000540896 A0A087WZG4 1122 aa8.32□□□□□ -1.08
CLTCL1-206ENST00000540896 RPS6KA4O75676 772 aa8.32□□□□□ -1.08
CLTCL1-206ENST00000540896 ALDH1L1O75891 902 aa8.32□□□□□ -1.08
CLTCL1-206ENST00000540896 GNAI3P08754 354 aa8.32□□□□□ -1.08
CLTCL1-206ENST00000540896 TRAPPC3LQ5T215 181 aa8.32□□□□□ -1.08
CLTCL1-206ENST00000540896 BEND3Q5T5X7 828 aa8.32□□□□□ -1.08
CLTCL1-206ENST00000540896 TRAF7Q6Q0C0 670 aa8.32□□□□□ -1.08
CLTCL1-206ENST00000540896 SMIM5Q71RC9 77 aa8.32□□□□□ -1.08
CLTCL1-206ENST00000540896 LRP10Q7Z4F1 713 aa8.32□□□□□ -1.08
CLTCL1-206ENST00000540896 DZIP3Q86Y13 1208 aaKnown RBP8.32□□□□□ -1.08
CLTCL1-206ENST00000540896 RWDD1Q9H446 243 aaPredicted RBP8.32□□□□□ -1.08
CLTCL1-206ENST00000540896 RTCBQ9Y3I0 505 aaKnown RBP8.32□□□□□ -1.08
CLTCL1-206ENST00000540896 ADCY9O60503 1353 aa8.32□□□□□ -1.08
CLTCL1-206ENST00000540896 ATP5J2-PTCD1G3V325 749 aa8.31□□□□□ -1.08
CLTCL1-206ENST00000540896 NR1I2O75469 434 aa8.31□□□□□ -1.08
CLTCL1-206ENST00000540896 GNAI2P04899 355 aa8.31□□□□□ -1.08
CLTCL1-206ENST00000540896 UBTFL1P0CB47 393 aaPredicted RBP8.31□□□□□ -1.08
CLTCL1-206ENST00000540896 SSFA2P28290 1259 aa8.31□□□□□ -1.08
CLTCL1-206ENST00000540896 EIF5P55010 431 aaKnown RBP8.31□□□□□ -1.08
CLTCL1-206ENST00000540896 CWF19L2Q2TBE0 894 aaKnown RBP8.31□□□□□ -1.08
CLTCL1-206ENST00000540896 AMIGO3Q86WK7 504 aa8.31□□□□□ -1.08
CLTCL1-206ENST00000540896 COL23A1Q86Y22 540 aaPredicted RBP8.31□□□□□ -1.08
CLTCL1-206ENST00000540896 FLAD1Q8NFF5 587 aa8.31□□□□□ -1.08
CLTCL1-206ENST00000540896 MEIS3Q99687 375 aa8.31□□□□□ -1.08
CLTCL1-206ENST00000540896 C1orf115Q9H7X2 142 aa8.31□□□□□ -1.08
CLTCL1-206ENST00000540896 HDAC5Q9UQL6 1122 aa8.31□□□□□ -1.08
CLTCL1-206ENST00000540896 MYH14Q7Z406 1995 aaKnown RBP8.31□□□□□ -1.08
CLTCL1-206ENST00000540896 MAP3K15Q6ZN16 1313 aa8.3□□□□□ -1.08
CLTCL1-206ENST00000540896 PNPLA7Q6ZV29 1317 aa8.3□□□□□ -1.08
CLTCL1-206ENST00000540896 NEURL1BA8MQ27 555 aa8.3□□□□□ -1.08
CLTCL1-206ENST00000540896 ERVV-1B6SEH8 477 aa8.3□□□□□ -1.08
CLTCL1-206ENST00000540896 RFC4P35249 363 aa8.3□□□□□ -1.08
CLTCL1-206ENST00000540896 TCIRG1Q13488 830 aa8.3□□□□□ -1.08
CLTCL1-206ENST00000540896 HSP90AB3PQ58FF7 597 aa8.3□□□□□ -1.08
CLTCL1-206ENST00000540896 BLOC1S3Q6QNY0 202 aa8.3□□□□□ -1.08
CLTCL1-206ENST00000540896 PDGFDQ9GZP0 370 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms