RNA–Protein interactions for RNA: ENST00000540352.5

MDM2-226, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-226ENST00000540352 KANK3Q6NY19 840 aa6.57□□□□□ -1.36
MDM2-226ENST00000540352 MDFIQ99750 246 aa6.57□□□□□ -1.36
MDM2-226ENST00000540352 RBSNQ9H1K0 784 aa6.57□□□□□ -1.36
MDM2-226ENST00000540352 M0R082 166 aa6.56□□□□□ -1.36
MDM2-226ENST00000540352 PHACTR2O75167 634 aa6.56□□□□□ -1.36
MDM2-226ENST00000540352 SOX18P35713 384 aa6.56□□□□□ -1.36
MDM2-226ENST00000540352 PDE3BQ13370 1112 aa6.56□□□□□ -1.36
MDM2-226ENST00000540352 TAF7LQ5H9L4 462 aa6.56□□□□□ -1.36
MDM2-226ENST00000540352 PSAPL1Q6NUJ1 521 aa6.56□□□□□ -1.36
MDM2-226ENST00000540352 ELMSAN1Q6PJG2 1045 aa6.56□□□□□ -1.36
MDM2-226ENST00000540352 GJD3Q8N144 294 aa6.56□□□□□ -1.36
MDM2-226ENST00000540352 MICALL1Q8N3F8 863 aa6.56□□□□□ -1.36
MDM2-226ENST00000540352 ZNF417Q8TAU3 575 aa6.56□□□□□ -1.36
MDM2-226ENST00000540352 TRPM4Q8TD43 1214 aa6.56□□□□□ -1.36
MDM2-226ENST00000540352 SNX29Q8TEQ0 813 aa6.56□□□□□ -1.36
MDM2-226ENST00000540352 NUDT8Q8WV74 236 aa6.56□□□□□ -1.36
MDM2-226ENST00000540352 SCARF2Q96GP6 870 aaPredicted RBP6.56□□□□□ -1.36
MDM2-226ENST00000540352 SPACA7Q96KW9 195 aa6.56□□□□□ -1.36
MDM2-226ENST00000540352 YTHDC1Q96MU7 727 aaKnown RBP6.56□□□□□ -1.36
MDM2-226ENST00000540352 ZNF587Q96SQ5 575 aaPredicted RBP6.56□□□□□ -1.36
MDM2-226ENST00000540352 JPH1Q9HDC5 661 aaPredicted RBP6.56□□□□□ -1.36
MDM2-226ENST00000540352 KANSL3Q9P2N6 904 aa6.56□□□□□ -1.36
MDM2-226ENST00000540352 NAGPAQ9UK23 515 aa6.56□□□□□ -1.36
MDM2-226ENST00000540352 MKL2Q9ULH7 1088 aa6.56□□□□□ -1.36
MDM2-226ENST00000540352 J3QW42 95 aa6.55□□□□□ -1.36
MDM2-226ENST00000540352 RNF225M0QZC1 329 aaPredicted RBP6.55□□□□□ -1.36
MDM2-226ENST00000540352 PIK3R2O00459 728 aa6.55□□□□□ -1.36
MDM2-226ENST00000540352 ALBP02768 609 aa6.55□□□□□ -1.36
MDM2-226ENST00000540352 CES1P23141 567 aa6.55□□□□□ -1.36
MDM2-226ENST00000540352 SNRPNP63162 240 aaKnown RBP6.55□□□□□ -1.36
MDM2-226ENST00000540352 HYAL2Q12891 473 aa6.55□□□□□ -1.36
MDM2-226ENST00000540352 NCAPG2Q86XI2 1143 aa6.55□□□□□ -1.36
MDM2-226ENST00000540352 OR13H1Q8NG92 308 aa6.55□□□□□ -1.36
MDM2-226ENST00000540352 DCTN4Q9UJW0 460 aa6.55□□□□□ -1.36
MDM2-226ENST00000540352 LOC102724428A0A0B4J2F2 783 aa6.54□□□□□ -1.36
MDM2-226ENST00000540352 ZBTB42B2RXF5 422 aa6.54□□□□□ -1.36
MDM2-226ENST00000540352 LILRB5O75023 590 aa6.54□□□□□ -1.36
MDM2-226ENST00000540352 TNFRSF21O75509 655 aa6.54□□□□□ -1.36
MDM2-226ENST00000540352 RGS9O75916 674 aaPredicted RBP6.54□□□□□ -1.36
MDM2-226ENST00000540352 CYP2E1P05181 493 aaPredicted RBP6.54□□□□□ -1.36
MDM2-226ENST00000540352 DGKGP49619 791 aa6.54□□□□□ -1.36
MDM2-226ENST00000540352 SIK1P57059 783 aa6.54□□□□□ -1.36
MDM2-226ENST00000540352 XKR5Q6UX68 686 aa6.54□□□□□ -1.36
MDM2-226ENST00000540352 BEND7Q8N7W2 519 aaPredicted RBP6.54□□□□□ -1.36
MDM2-226ENST00000540352 C1orf127Q8N9H9 656 aa6.54□□□□□ -1.36
MDM2-226ENST00000540352 CITED4Q96RK1 184 aa6.54□□□□□ -1.36
MDM2-226ENST00000540352 SMG9Q9H0W8 520 aaKnown RBP6.54□□□□□ -1.36
MDM2-226ENST00000540352 GZF1Q9H116 711 aaPredicted RBP6.54□□□□□ -1.36
MDM2-226ENST00000540352 CNTN3Q9P232 1028 aa6.54□□□□□ -1.36
MDM2-226ENST00000540352 FOXD3Q9UJU5 478 aaPredicted RBP6.54□□□□□ -1.36
MDM2-226ENST00000540352 CNTNAP5Q8WYK1 1306 aa6.54□□□□□ -1.36
MDM2-226ENST00000540352 PERM1Q5SV97 790 aa6.53□□□□□ -1.36
MDM2-226ENST00000540352 C8orf86Q6ZUL3 223 aa6.53□□□□□ -1.36
MDM2-226ENST00000540352 SND1Q7KZF4 910 aaKnown RBP eCLIP6.53□□□□□ -1.36
MDM2-226ENST00000540352 STARD13Q9Y3M8 1113 aa6.53□□□□□ -1.36
MDM2-226ENST00000540352 GNB5O14775 395 aa6.52□□□□□ -1.37
MDM2-226ENST00000540352 PMEPA1Q969W9 287 aa6.52□□□□□ -1.37
MDM2-226ENST00000540352 PLD4Q96BZ4 506 aa6.52□□□□□ -1.37
MDM2-226ENST00000540352 LPIN3Q9BQK8 851 aa6.52□□□□□ -1.37
MDM2-226ENST00000540352 EREGO14944 169 aa6.51□□□□□ -1.37
MDM2-226ENST00000540352 HOXD8P13378 290 aaPredicted RBP6.51□□□□□ -1.37
MDM2-226ENST00000540352 IRS1P35568 1242 aa6.51□□□□□ -1.37
MDM2-226ENST00000540352 COL13A1Q5TAT6 717 aaPredicted RBP6.51□□□□□ -1.37
MDM2-226ENST00000540352 ZSCAN29Q8IWY8 852 aaPredicted RBP6.51□□□□□ -1.37
MDM2-226ENST00000540352 DMRTB1Q96MA1 342 aa6.51□□□□□ -1.37
MDM2-226ENST00000540352 FAM129BQ96TA1 746 aa6.51□□□□□ -1.37
MDM2-226ENST00000540352 RBCK1Q9BYM8 510 aa6.51□□□□□ -1.37
MDM2-226ENST00000540352 NIF3L1Q9GZT8 377 aa6.51□□□□□ -1.37
MDM2-226ENST00000540352 FRRS1LQ9P0K9 344 aa6.51□□□□□ -1.37
MDM2-226ENST00000540352 AMOTL2Q9Y2J4 779 aa6.51□□□□□ -1.37
MDM2-226ENST00000540352 FAM177BA6PVY3 158 aa6.5□□□□□ -1.37
MDM2-226ENST00000540352 GPR182O15218 404 aa6.5□□□□□ -1.37
MDM2-226ENST00000540352 ZNF326Q5BKZ1 582 aaKnown RBP6.5□□□□□ -1.37
MDM2-226ENST00000540352 GDF6Q6KF10 455 aaPredicted RBP6.5□□□□□ -1.37
MDM2-226ENST00000540352 TMC7Q7Z402 723 aa6.5□□□□□ -1.37
MDM2-226ENST00000540352 CHRDQ9H2X0 955 aa6.5□□□□□ -1.37
MDM2-226ENST00000540352 NOP53Q9NZM5 478 aaKnown RBP6.5□□□□□ -1.37
MDM2-226ENST00000540352 SPDYE3A6NKU9 549 aa6.5□□□□□ -1.37
MDM2-226ENST00000540352 SMNDC1O75940 238 aaKnown RBP eCLIP6.5□□□□□ -1.371e-7■■□□□ 13.3
MDM2-226ENST00000540352 KIF4AO95239 1232 aa6.5□□□□□ -1.37
MDM2-226ENST00000540352 POLR3DP05423 398 aaPredicted RBP6.5□□□□□ -1.37
MDM2-226ENST00000540352 EDN3P14138 238 aa6.5□□□□□ -1.37
MDM2-226ENST00000540352 HOXB4P17483 251 aaPredicted RBP6.5□□□□□ -1.37
MDM2-226ENST00000540352 ATP11AP98196 1134 aa6.5□□□□□ -1.37
MDM2-226ENST00000540352 ORC1Q13415 861 aa6.5□□□□□ -1.37
MDM2-226ENST00000540352 CEP135Q66GS9 1140 aa6.5□□□□□ -1.37
MDM2-226ENST00000540352 C20orf204Q6ZNR8 217 aa6.5□□□□□ -1.37
MDM2-226ENST00000540352 CPNE3O75131 537 aaKnown RBP6.49□□□□□ -1.37
MDM2-226ENST00000540352 AFF1P51825 1210 aaKnown RBP6.49□□□□□ -1.37
MDM2-226ENST00000540352 TRAPPC3LQ5T215 181 aa6.49□□□□□ -1.37
MDM2-226ENST00000540352 LINC00114Q6XXX2 140 aa6.49□□□□□ -1.37
MDM2-226ENST00000540352 WFDC8Q8IUA0 241 aa6.49□□□□□ -1.37
MDM2-226ENST00000540352 PLVAPQ9BX97 442 aa6.49□□□□□ -1.37
MDM2-226ENST00000540352 LACRTQ9GZZ8 138 aa6.49□□□□□ -1.37
MDM2-226ENST00000540352 RASSF4Q9H2L5 321 aa6.49□□□□□ -1.37
MDM2-226ENST00000540352 ZFYVE28Q9HCC9 887 aa6.49□□□□□ -1.37
MDM2-226ENST00000540352 PRDM6Q9NQX0 595 aa6.49□□□□□ -1.37
MDM2-226ENST00000540352 CCDC9Q9Y3X0 531 aaKnown RBP6.49□□□□□ -1.37
MDM2-226ENST00000540352 ACPPP15309 386 aa6.48□□□□□ -1.37
MDM2-226ENST00000540352 GSK3AP49840 483 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms