RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 WASHC4Q2M389 1173 aa6.95□□□□□ -1.3
CHD4-205ENST00000536301 DDX46Q7L014 1031 aaKnown RBP6.95□□□□□ -1.3
CHD4-205ENST00000536301 SULF1Q8IWU6 871 aa6.95□□□□□ -1.3
CHD4-205ENST00000536301 NECTIN2Q92692 538 aa6.95□□□□□ -1.3
CHD4-205ENST00000536301 GCC1Q96CN9 775 aa6.95□□□□□ -1.3
CHD4-205ENST00000536301 NSFL1CQ9UNZ2 370 aaKnown RBP6.95□□□□□ -1.3
CHD4-205ENST00000536301 C6orf229H3BNL8 230 aa6.94□□□□□ -1.3
CHD4-205ENST00000536301 HTATSF1O43719 755 aaKnown RBP6.94□□□□□ -1.3
CHD4-205ENST00000536301 VIL1P09327 827 aaKnown RBP6.94□□□□□ -1.3
CHD4-205ENST00000536301 EN2P19622 333 aaPredicted RBP6.94□□□□□ -1.3
CHD4-205ENST00000536301 EIF2S2P20042 333 aaKnown RBP6.94□□□□□ -1.3
CHD4-205ENST00000536301 RPS12P25398 132 aaKnown RBP6.94□□□□□ -1.3
CHD4-205ENST00000536301 AIMP1Q12904 312 aaKnown RBP6.94□□□□□ -1.3
CHD4-205ENST00000536301 PKN2Q16513 984 aaKnown RBP6.94□□□□□ -1.3
CHD4-205ENST00000536301 TBC1D16Q8TBP0 767 aa6.94□□□□□ -1.3
CHD4-205ENST00000536301 XAGE3Q8WTP9 111 aa6.94□□□□□ -1.3
CHD4-205ENST00000536301 TRMT112Q9UI30 125 aaKnown RBP6.94□□□□□ -1.3
CHD4-205ENST00000536301 FZD1Q9UP38 647 aa6.94□□□□□ -1.3
CHD4-205ENST00000536301 COLQQ9Y215 455 aaPredicted RBP6.94□□□□□ -1.3
CHD4-205ENST00000536301 RANBP2P49792 3224 aaKnown RBP6.93□□□□□ -1.3
CHD4-205ENST00000536301 WTIPA6NIX2 430 aaPredicted RBP6.93□□□□□ -1.3
CHD4-205ENST00000536301 FKTNO75072 461 aa6.93□□□□□ -1.3
CHD4-205ENST00000536301 PPP2R1AP30153 589 aa6.93□□□□□ -1.3
CHD4-205ENST00000536301 TM4SF4P48230 202 aa6.93□□□□□ -1.3
CHD4-205ENST00000536301 ZNF280AP59817 542 aaPredicted RBP6.93□□□□□ -1.3
CHD4-205ENST00000536301 KRT24Q2M2I5 525 aa6.93□□□□□ -1.3
CHD4-205ENST00000536301 RTL5Q5HYW3 569 aaPredicted RBP6.93□□□□□ -1.3
CHD4-205ENST00000536301 COPS6Q7L5N1 327 aa6.93□□□□□ -1.3
CHD4-205ENST00000536301 GMLQ99445 158 aa6.93□□□□□ -1.3
CHD4-205ENST00000536301 MXD3Q9BW11 206 aa6.93□□□□□ -1.3
CHD4-205ENST00000536301 PCGF6Q9BYE7 350 aa6.93□□□□□ -1.3
CHD4-205ENST00000536301 TRIM17Q9Y577 477 aa6.93□□□□□ -1.3
CHD4-205ENST00000536301 SH3TC1Q8TE82 1336 aa6.93□□□□□ -1.3
CHD4-205ENST00000536301 CUL9Q8IWT3 2517 aa6.93□□□□□ -1.3
CHD4-205ENST00000536301 ZSWIM8A7E2V4 1837 aa6.92□□□□□ -1.3
CHD4-205ENST00000536301 COL6A3P12111 3177 aa6.92□□□□□ -1.3
CHD4-205ENST00000536301 A0A0C4DFX4 3053 aa6.92□□□□□ -1.3
CHD4-205ENST00000536301 PTPN12Q05209 780 aaKnown RBP6.92□□□□□ -1.3
CHD4-205ENST00000536301 TCIRG1Q13488 830 aa6.92□□□□□ -1.3
CHD4-205ENST00000536301 PRKG1Q13976 671 aa6.92□□□□□ -1.3
CHD4-205ENST00000536301 NBPF9Q3BBW0 867 aa6.92□□□□□ -1.3
CHD4-205ENST00000536301 RSBN1LQ6PCB5 846 aaPredicted RBP6.92□□□□□ -1.3
CHD4-205ENST00000536301 OTOP1Q7RTM1 612 aa6.92□□□□□ -1.3
CHD4-205ENST00000536301 FAM89AQ96GI7 184 aa6.92□□□□□ -1.3
CHD4-205ENST00000536301 CFAP53Q96M91 514 aa6.92□□□□□ -1.3
CHD4-205ENST00000536301 SEC31BQ9NQW1 1179 aa6.92□□□□□ -1.3
CHD4-205ENST00000536301 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.92□□□□□ -1.3
CHD4-205ENST00000536301 ERBB4Q15303 1308 aa6.92□□□□□ -1.3
CHD4-205ENST00000536301 ATP5J2-PTCD1G3V325 749 aa6.91□□□□□ -1.3
CHD4-205ENST00000536301 UFL1O94874 794 aa6.91□□□□□ -1.3
CHD4-205ENST00000536301 FKBP1BP68106 108 aa6.91□□□□□ -1.3
CHD4-205ENST00000536301 TTLL12Q14166 644 aaPredicted RBP6.91□□□□□ -1.3
CHD4-205ENST00000536301 SF3B3Q15393 1217 aaKnown RBP6.91□□□□□ -1.3
CHD4-205ENST00000536301 NOM1Q5C9Z4 860 aaKnown RBP6.91□□□□□ -1.3
CHD4-205ENST00000536301 REM2Q8IYK8 340 aaPredicted RBP6.91□□□□□ -1.3
CHD4-205ENST00000536301 PNISRQ8TF01 805 aaKnown RBP6.91□□□□□ -1.3
CHD4-205ENST00000536301 PLEKHF1Q96S99 279 aa6.91□□□□□ -1.3
CHD4-205ENST00000536301 MYOZ2Q9NPC6 264 aa6.91□□□□□ -1.3
CHD4-205ENST00000536301 NUDCQ9Y266 331 aa6.91□□□□□ -1.3
CHD4-205ENST00000536301 SPEF2Q9C093 1822 aa6.91□□□□□ -1.3
CHD4-205ENST00000536301 ZNF609O15014 1411 aa6.91□□□□□ -1.3
CHD4-205ENST00000536301 IGF2BP3O00425 579 aaKnown RBP eCLIP6.9□□□□□ -1.3
CHD4-205ENST00000536301 SASH1O94885 1247 aa6.9□□□□□ -1.3
CHD4-205ENST00000536301 NFE2L2Q16236 605 aa6.9□□□□□ -1.3
CHD4-205ENST00000536301 TMC4Q7Z404 712 aa6.9□□□□□ -1.3
CHD4-205ENST00000536301 CD99L2Q8TCZ2 262 aa6.9□□□□□ -1.3
CHD4-205ENST00000536301 JARID2Q92833 1246 aaPredicted RBP6.9□□□□□ -1.3
CHD4-205ENST00000536301 EYA3Q99504 573 aa6.9□□□□□ -1.3
CHD4-205ENST00000536301 ISCA1Q9BUE6 129 aa6.9□□□□□ -1.3
CHD4-205ENST00000536301 CFHR5Q9BXR6 569 aa6.9□□□□□ -1.3
CHD4-205ENST00000536301 TSPYL4Q9UJ04 414 aa6.9□□□□□ -1.3
CHD4-205ENST00000536301 PITPNM2Q9BZ72 1349 aa6.9□□□□□ -1.3
CHD4-205ENST00000536301 SSC5DA1L4H1 1573 aa6.9□□□□□ -1.31
CHD4-205ENST00000536301 LAMB1P07942 1786 aa6.9□□□□□ -1.31
CHD4-205ENST00000536301 USP17L8P0C7I0 530 aa6.89□□□□□ -1.31
CHD4-205ENST00000536301 GJA5P36382 358 aa6.89□□□□□ -1.31
CHD4-205ENST00000536301 RPS8P62241 208 aaKnown RBP6.89□□□□□ -1.31
CHD4-205ENST00000536301 HSP90AB3PQ58FF7 597 aa6.89□□□□□ -1.31
CHD4-205ENST00000536301 SPRYD7Q5W111 196 aa6.89□□□□□ -1.31
CHD4-205ENST00000536301 AGBL3Q8NEM8 1001 aa6.89□□□□□ -1.31
CHD4-205ENST00000536301 OTUD5Q96G74 571 aa6.89□□□□□ -1.31
CHD4-205ENST00000536301 CLMNQ96JQ2 1002 aa6.89□□□□□ -1.31
CHD4-205ENST00000536301 CCDC85AQ96PX6 553 aaPredicted RBP6.89□□□□□ -1.31
CHD4-205ENST00000536301 ZC3H12CQ9C0D7 883 aaKnown RBP6.89□□□□□ -1.31
CHD4-205ENST00000536301 PODXL2Q9NZ53 605 aa6.89□□□□□ -1.31
CHD4-205ENST00000536301 PTPN22Q9Y2R2 807 aa6.89□□□□□ -1.31
CHD4-205ENST00000536301 LAMA3Q16787 3333 aa6.89□□□□□ -1.31
CHD4-205ENST00000536301 OTOFQ9HC10 1997 aa6.88□□□□□ -1.31
CHD4-205ENST00000536301 AOX1Q06278 1338 aa6.88□□□□□ -1.31
CHD4-205ENST00000536301 CLSPNQ9HAW4 1339 aa6.88□□□□□ -1.31
CHD4-205ENST00000536301 H0YGN5 161 aa6.88□□□□□ -1.31
CHD4-205ENST00000536301 DLL1O00548 723 aa6.88□□□□□ -1.31
CHD4-205ENST00000536301 WNT10BO00744 389 aa6.88□□□□□ -1.31
CHD4-205ENST00000536301 IRS4O14654 1257 aaPredicted RBP6.88□□□□□ -1.31
CHD4-205ENST00000536301 MYCP01106 439 aaPredicted RBP6.88□□□□□ -1.31
CHD4-205ENST00000536301 SREBF2Q12772 1141 aa6.88□□□□□ -1.31
CHD4-205ENST00000536301 TRIM26Q12899 539 aaPredicted RBP6.88□□□□□ -1.31
CHD4-205ENST00000536301 LDLRAD1Q5T700 205 aa6.88□□□□□ -1.31
CHD4-205ENST00000536301 IFNL1Q8IU54 200 aa6.88□□□□□ -1.31
CHD4-205ENST00000536301 ARMC5Q96C12 935 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms