RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 IDH3AP50213 366 aa8.22□□□□□ -1.09
SVIP-202ENST00000525670 DGKZQ13574 1117 aa8.22□□□□□ -1.09
SVIP-202ENST00000525670 SLC6A14Q9UN76 642 aa8.22□□□□□ -1.09
SVIP-202ENST00000525670 NOVA2Q9UNW9 492 aaKnown RBP8.22□□□□□ -1.09
SVIP-202ENST00000525670 FMN1Q68DA7 1419 aa8.21□□□□□ -1.09
SVIP-202ENST00000525670 MICAL2O94851 1124 aa8.21□□□□□ -1.1
SVIP-202ENST00000525670 NFKB1P19838 968 aa8.21□□□□□ -1.1
SVIP-202ENST00000525670 GATA4P43694 442 aa8.21□□□□□ -1.1
SVIP-202ENST00000525670 DNAJB12Q9NXW2 375 aaKnown RBP8.21□□□□□ -1.1
SVIP-202ENST00000525670 TTC37Q6PGP7 1564 aa8.2□□□□□ -1.1
SVIP-202ENST00000525670 APBA3O96018 575 aa8.2□□□□□ -1.1
SVIP-202ENST00000525670 GRNP28799 593 aaKnown RBP8.2□□□□□ -1.1
SVIP-202ENST00000525670 ARSDP51689 593 aa8.2□□□□□ -1.1
SVIP-202ENST00000525670 ELOAQ14241 798 aaKnown RBP8.2□□□□□ -1.1
SVIP-202ENST00000525670 PCSK7Q16549 785 aa8.2□□□□□ -1.1
SVIP-202ENST00000525670 SWI5Q1ZZU3 235 aa8.2□□□□□ -1.1
SVIP-202ENST00000525670 KIF14Q15058 1648 aa8.2□□□□□ -1.1
SVIP-202ENST00000525670 MAP3K4Q9Y6R4 1608 aa8.2□□□□□ -1.1
SVIP-202ENST00000525670 FAM229AH3BQW9 127 aa8.19□□□□□ -1.1
SVIP-202ENST00000525670 MAP3K6O95382 1288 aa8.19□□□□□ -1.1
SVIP-202ENST00000525670 TRAPPC3LQ5T215 181 aa8.19□□□□□ -1.1
SVIP-202ENST00000525670 IFT43Q96FT9 208 aa8.19□□□□□ -1.1
SVIP-202ENST00000525670 NACC1Q96RE7 527 aa8.19□□□□□ -1.1
SVIP-202ENST00000525670 ACIN1Q9UKV3 1341 aaKnown RBP8.19□□□□□ -1.1
SVIP-202ENST00000525670 KDM6BO15054 1643 aa8.18□□□□□ -1.1
SVIP-202ENST00000525670 DOC2BQ14184 412 aa8.18□□□□□ -1.1
SVIP-202ENST00000525670 JPH1Q9HDC5 661 aaPredicted RBP8.18□□□□□ -1.1
SVIP-202ENST00000525670 LRFN2Q9ULH4 789 aa8.18□□□□□ -1.1
SVIP-202ENST00000525670 FYCO1Q9BQS8 1478 aa8.18□□□□□ -1.1
SVIP-202ENST00000525670 CFAP43Q8NDM7 1665 aa8.18□□□□□ -1.1
SVIP-202ENST00000525670 OPLAHO14841 1288 aa8.17□□□□□ -1.1
SVIP-202ENST00000525670 SRPK2P78362 688 aaKnown RBP8.17□□□□□ -1.1
SVIP-202ENST00000525670 FKBP5Q13451 457 aaPredicted RBP8.17□□□□□ -1.1
SVIP-202ENST00000525670 PSAPL1Q6NUJ1 521 aa8.17□□□□□ -1.1
SVIP-202ENST00000525670 NUDT8Q8WV74 236 aa8.17□□□□□ -1.1
SVIP-202ENST00000525670 PRIMPOLQ96LW4 560 aa8.17□□□□□ -1.1
SVIP-202ENST00000525670 CASKIN1Q8WXD9 1431 aa8.17□□□□□ -1.1
SVIP-202ENST00000525670 MAGI3Q5TCQ9 1506 aa8.17□□□□□ -1.1
SVIP-202ENST00000525670 GLI2P10070 1586 aa8.17□□□□□ -1.1
SVIP-202ENST00000525670 RGS9O75916 674 aaPredicted RBP8.16□□□□□ -1.1
SVIP-202ENST00000525670 TARSP26639 723 aaKnown RBP8.16□□□□□ -1.1
SVIP-202ENST00000525670 AFF1P51825 1210 aaKnown RBP8.16□□□□□ -1.1
SVIP-202ENST00000525670 GRIK4Q16099 956 aa8.16□□□□□ -1.1
SVIP-202ENST00000525670 ZMYND15Q9H091 742 aa8.16□□□□□ -1.1
SVIP-202ENST00000525670 ZFATQ9P243 1243 aa8.16□□□□□ -1.1
SVIP-202ENST00000525670 NAGPAQ9UK23 515 aa8.16□□□□□ -1.1
SVIP-202ENST00000525670 ZMIZ1Q9ULJ6 1067 aa8.16□□□□□ -1.1
SVIP-202ENST00000525670 ABCA9Q8IUA7 1624 aa8.15□□□□□ -1.1
SVIP-202ENST00000525670 A0A0A0MRY4 1105 aa8.15□□□□□ -1.1
SVIP-202ENST00000525670 SASH3O75995 380 aa8.15□□□□□ -1.1
SVIP-202ENST00000525670 OCLNQ16625 522 aa8.15□□□□□ -1.1
SVIP-202ENST00000525670 COX20Q5RI15 118 aa8.15□□□□□ -1.1
SVIP-202ENST00000525670 DHX32Q7L7V1 743 aaKnown RBP8.15□□□□□ -1.1
SVIP-202ENST00000525670 KRT25Q7Z3Z0 450 aa8.15□□□□□ -1.1
SVIP-202ENST00000525670 FAM35AQ86V20 835 aa8.15□□□□□ -1.1
SVIP-202ENST00000525670 TRPM4Q8TD43 1214 aa8.15□□□□□ -1.1
SVIP-202ENST00000525670 RTCBQ9Y3I0 505 aaKnown RBP8.15□□□□□ -1.1
SVIP-202ENST00000525670 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.14□□□□□ -1.11
SVIP-202ENST00000525670 CCDC18Q5T9S5 1454 aa8.14□□□□□ -1.11
SVIP-202ENST00000525670 CD109Q6YHK3 1445 aa8.14□□□□□ -1.11
SVIP-202ENST00000525670 ZBTB42B2RXF5 422 aa8.14□□□□□ -1.11
SVIP-202ENST00000525670 C9orf172C9J069 976 aa8.14□□□□□ -1.11
SVIP-202ENST00000525670 PRMT3O60678 531 aa8.14□□□□□ -1.11
SVIP-202ENST00000525670 ATG7O95352 703 aa8.14□□□□□ -1.11
SVIP-202ENST00000525670 EGFRP00533 1210 aa8.14□□□□□ -1.11
SVIP-202ENST00000525670 ELNP15502 786 aa8.14□□□□□ -1.11
SVIP-202ENST00000525670 RAC1P63000 192 aa8.14□□□□□ -1.11
SVIP-202ENST00000525670 ILDR2Q71H61 639 aa8.14□□□□□ -1.11
SVIP-202ENST00000525670 FRRS1LQ9P0K9 344 aa8.14□□□□□ -1.11
SVIP-202ENST00000525670 MYO5CQ9NQX4 1742 aa8.13□□□□□ -1.11
SVIP-202ENST00000525670 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.13□□□□□ -1.11
SVIP-202ENST00000525670 RARAP10276 462 aa8.13□□□□□ -1.11
SVIP-202ENST00000525670 CPB1P15086 417 aa8.13□□□□□ -1.11
SVIP-202ENST00000525670 ARID4AP29374 1257 aaPredicted RBP8.13□□□□□ -1.11
SVIP-202ENST00000525670 TREML1Q86YW5 311 aa8.13□□□□□ -1.11
SVIP-202ENST00000525670 STK32AQ8WU08 396 aa8.13□□□□□ -1.11
SVIP-202ENST00000525670 COL26A1Q96A83 441 aa8.13□□□□□ -1.11
SVIP-202ENST00000525670 SEMA6BQ9H3T3 888 aa8.13□□□□□ -1.11
SVIP-202ENST00000525670 PLEKHD1A6NEE1 506 aa8.12□□□□□ -1.11
SVIP-202ENST00000525670 GPLD1P80108 840 aa8.12□□□□□ -1.11
SVIP-202ENST00000525670 DMRTC2Q8IXT2 367 aaPredicted RBP8.12□□□□□ -1.11
SVIP-202ENST00000525670 CMTR1Q8N1G2 835 aaKnown RBP8.12□□□□□ -1.11
SVIP-202ENST00000525670 TTC9Q92623 222 aa8.12□□□□□ -1.11
SVIP-202ENST00000525670 USP20Q9Y2K6 914 aa8.12□□□□□ -1.11
SVIP-202ENST00000525670 TEX14Q8IWB6 1497 aa8.12□□□□□ -1.11
SVIP-202ENST00000525670 TROQ12816 1431 aaPredicted RBP8.12□□□□□ -1.11
SVIP-202ENST00000525670 VPS8Q8N3P4 1428 aa8.12□□□□□ -1.11
SVIP-202ENST00000525670 XYLBO75191 536 aa8.11□□□□□ -1.11
SVIP-202ENST00000525670 BRD2P25440 801 aaKnown RBP8.11□□□□□ -1.11
SVIP-202ENST00000525670 NRLP54845 237 aa8.11□□□□□ -1.11
SVIP-202ENST00000525670 PERM1Q5SV97 790 aa8.11□□□□□ -1.11
SVIP-202ENST00000525670 C16orf46Q6P387 395 aa8.11□□□□□ -1.11
SVIP-202ENST00000525670 ELMSAN1Q6PJG2 1045 aa8.11□□□□□ -1.11
SVIP-202ENST00000525670 RGL4Q8IZJ4 473 aa8.11□□□□□ -1.11
SVIP-202ENST00000525670 LENG1Q96BZ8 264 aaPredicted RBP8.11□□□□□ -1.11
SVIP-202ENST00000525670 LPIN3Q9BQK8 851 aa8.11□□□□□ -1.11
SVIP-202ENST00000525670 TPSG1Q9NRR2 321 aa8.11□□□□□ -1.11
SVIP-202ENST00000525670 TLR7Q9NYK1 1049 aaKnown RBP8.11□□□□□ -1.11
SVIP-202ENST00000525670 TIAM1Q13009 1591 aa8.1□□□□□ -1.11
SVIP-202ENST00000525670 ARHGAP5Q13017 1502 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms