RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 FAM157BP0CG42 384 aa5.71□□□□□ -1.5
UBE2D3-226ENST00000508635 TXKP42681 527 aa5.71□□□□□ -1.5
UBE2D3-226ENST00000508635 SERPINB4P48594 390 aa5.71□□□□□ -1.5
UBE2D3-226ENST00000508635 IDH3AP50213 366 aa5.71□□□□□ -1.5
UBE2D3-226ENST00000508635 ZNF211Q13398 564 aaPredicted RBP5.71□□□□□ -1.5
UBE2D3-226ENST00000508635 SAMD5Q5TGI4 173 aa5.71□□□□□ -1.5
UBE2D3-226ENST00000508635 TREML1Q86YW5 311 aa5.71□□□□□ -1.5
UBE2D3-226ENST00000508635 ETFBKMTQ8IXQ9 262 aa5.71□□□□□ -1.5
UBE2D3-226ENST00000508635 ATP10BO94823 1461 aa5.71□□□□□ -1.5
UBE2D3-226ENST00000508635 KIF21BO75037 1637 aa5.7□□□□□ -1.5
UBE2D3-226ENST00000508635 ZBTB39O15060 712 aa5.7□□□□□ -1.5
UBE2D3-226ENST00000508635 BMP4P12644 408 aa5.7□□□□□ -1.5
UBE2D3-226ENST00000508635 PDIA4P13667 645 aaKnown RBP5.7□□□□□ -1.5
UBE2D3-226ENST00000508635 BRD2P25440 801 aaKnown RBP5.7□□□□□ -1.5
UBE2D3-226ENST00000508635 ARID4AP29374 1257 aaPredicted RBP5.7□□□□□ -1.5
UBE2D3-226ENST00000508635 RANGAP1P46060 587 aaPredicted RBP5.7□□□□□ -1.5
UBE2D3-226ENST00000508635 MARK1Q9P0L2 795 aa5.7□□□□□ -1.5
UBE2D3-226ENST00000508635 STIM2Q9P246 746 aa5.7□□□□□ -1.5
UBE2D3-226ENST00000508635 DMGDHQ9UI17 866 aaKnown RBP5.7□□□□□ -1.5
UBE2D3-226ENST00000508635 GDF2Q9UK05 429 aaPredicted RBP5.7□□□□□ -1.5
UBE2D3-226ENST00000508635 MTMR7Q9Y216 660 aa5.7□□□□□ -1.5
UBE2D3-226ENST00000508635 TEX14Q8IWB6 1497 aa5.7□□□□□ -1.5
UBE2D3-226ENST00000508635 COL17A1Q9UMD9 1497 aaPredicted RBP5.7□□□□□ -1.5
UBE2D3-226ENST00000508635 CD109Q6YHK3 1445 aa5.69□□□□□ -1.5
UBE2D3-226ENST00000508635 EFSO43281 561 aa5.69□□□□□ -1.5
UBE2D3-226ENST00000508635 GATA4P43694 442 aa5.69□□□□□ -1.5
UBE2D3-226ENST00000508635 FOXD4L6Q3SYB3 417 aaPredicted RBP5.69□□□□□ -1.5
UBE2D3-226ENST00000508635 IER5Q5VY09 327 aa5.69□□□□□ -1.5
UBE2D3-226ENST00000508635 FOXD4L3Q6VB84 417 aaPredicted RBP5.69□□□□□ -1.5
UBE2D3-226ENST00000508635 RAB44Q7Z6P3 723 aaPredicted RBP5.69□□□□□ -1.5
UBE2D3-226ENST00000508635 RGL4Q8IZJ4 473 aa5.69□□□□□ -1.5
UBE2D3-226ENST00000508635 HELQQ8TDG4 1101 aa5.69□□□□□ -1.5
UBE2D3-226ENST00000508635 TRAIPQ9BWF2 469 aa5.69□□□□□ -1.5
UBE2D3-226ENST00000508635 PRR12Q9ULL5 1215 aa5.69□□□□□ -1.5
UBE2D3-226ENST00000508635 KCNH4Q9UQ05 1017 aa5.69□□□□□ -1.5
UBE2D3-226ENST00000508635 FHOD3Q2V2M9 1422 aa5.68□□□□□ -1.5
UBE2D3-226ENST00000508635 RAPGEF6Q8TEU7 1601 aa5.68□□□□□ -1.5
UBE2D3-226ENST00000508635 SHISA8B8ZZ34 492 aa5.68□□□□□ -1.5
UBE2D3-226ENST00000508635 OPLAHO14841 1288 aa5.68□□□□□ -1.5
UBE2D3-226ENST00000508635 BRD1O95696 1058 aa5.68□□□□□ -1.5
UBE2D3-226ENST00000508635 MPSTP25325 297 aa5.68□□□□□ -1.5
UBE2D3-226ENST00000508635 INPP5BP32019 993 aa5.68□□□□□ -1.5
UBE2D3-226ENST00000508635 CHRNA4P43681 627 aa5.68□□□□□ -1.5
UBE2D3-226ENST00000508635 ARSDP51689 593 aa5.68□□□□□ -1.5
UBE2D3-226ENST00000508635 LINC00114Q6XXX2 140 aa5.68□□□□□ -1.5
UBE2D3-226ENST00000508635 ATCAYQ86WG3 371 aa5.68□□□□□ -1.5
UBE2D3-226ENST00000508635 AEBP1Q8IUX7 1158 aa5.68□□□□□ -1.5
UBE2D3-226ENST00000508635 CMTR1Q8N1G2 835 aaKnown RBP5.68□□□□□ -1.5
UBE2D3-226ENST00000508635 SLC30A3Q99726 388 aa5.68□□□□□ -1.5
UBE2D3-226ENST00000508635 MAGI3Q5TCQ9 1506 aa5.68□□□□□ -1.5
UBE2D3-226ENST00000508635 NUP153P49790 1475 aaKnown RBP5.67□□□□□ -1.5
UBE2D3-226ENST00000508635 PAX4O43316 350 aa5.67□□□□□ -1.5
UBE2D3-226ENST00000508635 GRNP28799 593 aaKnown RBP5.67□□□□□ -1.5
UBE2D3-226ENST00000508635 ZAP70P43403 619 aa5.67□□□□□ -1.5
UBE2D3-226ENST00000508635 PCBP4P57723 403 aaKnown RBP5.67□□□□□ -1.5
UBE2D3-226ENST00000508635 AAMPQ13685 434 aa5.67□□□□□ -1.5
UBE2D3-226ENST00000508635 LAMC2Q13753 1193 aa5.67□□□□□ -1.5
UBE2D3-226ENST00000508635 TXNDC2Q86VQ3 553 aa5.67□□□□□ -1.5
UBE2D3-226ENST00000508635 ABTB2Q8N961 1025 aa5.67□□□□□ -1.5
UBE2D3-226ENST00000508635 CCER1Q8TC90 406 aaPredicted RBP5.67□□□□□ -1.5
UBE2D3-226ENST00000508635 GPR152Q8TDT2 470 aa5.67□□□□□ -1.5
UBE2D3-226ENST00000508635 RTCBQ9Y3I0 505 aaKnown RBP5.67□□□□□ -1.5
UBE2D3-226ENST00000508635 EFCAB5A4FU69 1503 aa5.67□□□□□ -1.5
UBE2D3-226ENST00000508635 CFAP43Q8NDM7 1665 aa5.66□□□□□ -1.5
UBE2D3-226ENST00000508635 H3BRB1 525 aa5.66□□□□□ -1.5
UBE2D3-226ENST00000508635 EPB42P16452 691 aa5.66□□□□□ -1.5
UBE2D3-226ENST00000508635 EIF1AXP47813 144 aaKnown RBP5.66□□□□□ -1.5
UBE2D3-226ENST00000508635 FKBP4Q02790 459 aaKnown RBP eCLIP5.66□□□□□ -1.5
UBE2D3-226ENST00000508635 SPEM2Q0P670 501 aa5.66□□□□□ -1.5
UBE2D3-226ENST00000508635 LRP8Q14114 963 aa5.66□□□□□ -1.5
UBE2D3-226ENST00000508635 RSPO4Q2I0M5 234 aaPredicted RBP5.66□□□□□ -1.5
UBE2D3-226ENST00000508635 NOM1Q5C9Z4 860 aaKnown RBP5.66□□□□□ -1.5
UBE2D3-226ENST00000508635 KRTAP5-3Q6L8H2 238 aa5.66□□□□□ -1.5
UBE2D3-226ENST00000508635 KRT25Q7Z3Z0 450 aa5.66□□□□□ -1.5
UBE2D3-226ENST00000508635 EDARADDQ8WWZ3 215 aa5.66□□□□□ -1.5
UBE2D3-226ENST00000508635 BHMTQ93088 406 aa5.66□□□□□ -1.5
UBE2D3-226ENST00000508635 TUT1Q9H6E5 874 aaKnown RBP5.66□□□□□ -1.5
UBE2D3-226ENST00000508635 NEURL1BA8MQ27 555 aa5.65□□□□□ -1.5
UBE2D3-226ENST00000508635 KCNQ4P56696 695 aa5.65□□□□□ -1.5
UBE2D3-226ENST00000508635 DNM1Q05193 864 aaKnown RBP5.65□□□□□ -1.5
UBE2D3-226ENST00000508635 FAM182BQ5T319 152 aa5.65□□□□□ -1.5
UBE2D3-226ENST00000508635 GLYCTKQ8IVS8 523 aa5.65□□□□□ -1.5
UBE2D3-226ENST00000508635 GOLGA6L1Q8N7Z2 621 aa5.65□□□□□ -1.5
UBE2D3-226ENST00000508635 SUV39H2Q9H5I1 410 aa5.65□□□□□ -1.5
UBE2D3-226ENST00000508635 IGFLR1Q9H665 355 aa5.65□□□□□ -1.5
UBE2D3-226ENST00000508635 IVNS1ABPQ9Y6Y0 642 aa5.65□□□□□ -1.5
UBE2D3-226ENST00000508635 ABCA9Q8IUA7 1624 aa5.65□□□□□ -1.51
UBE2D3-226ENST00000508635 ARAP3Q8WWN8 1544 aa5.64□□□□□ -1.51
UBE2D3-226ENST00000508635 PLEKHD1A6NEE1 506 aa5.64□□□□□ -1.51
UBE2D3-226ENST00000508635 ICMTO60725 284 aa5.64□□□□□ -1.51
UBE2D3-226ENST00000508635 SASH3O75995 380 aa5.64□□□□□ -1.51
UBE2D3-226ENST00000508635 TBC1D8BQ0IIM8 1120 aa5.64□□□□□ -1.51
UBE2D3-226ENST00000508635 SF3B2Q13435 895 aaKnown RBP5.64□□□□□ -1.51
UBE2D3-226ENST00000508635 CCINQ13939 588 aa5.64□□□□□ -1.51
UBE2D3-226ENST00000508635 NKAPLQ5M9Q1 402 aa5.64□□□□□ -1.51
UBE2D3-226ENST00000508635 SYT9Q86SS6 491 aa5.64□□□□□ -1.51
UBE2D3-226ENST00000508635 PIK3R5Q8WYR1 880 aa5.64□□□□□ -1.51
UBE2D3-226ENST00000508635 EDEM1Q92611 657 aa5.64□□□□□ -1.51
UBE2D3-226ENST00000508635 PNMA5Q96PV4 448 aa5.64□□□□□ -1.51
UBE2D3-226ENST00000508635 GSX2Q9BZM3 304 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms